BP915501
Clone id YMU001_000072_D05
Library
Length 403
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACGATGATGGATAGTGAGGGACCATCAGTATCATTCCTTGGTCCATCATTGTCTAAAGT
GGTCACAGTGTCTTTTTGTGTTCTGTCTGCTATTGGTGGTGAGAGCTCCAAGGTGGTGGT
AGGCACAACTGCAACTTCAGCTGGTGTGTGATTTTGGACTTGGATTGAAGAAGTAGAGGA
ATGGTTGTTCGTAAGTTCTGCCAAAACTACCTTATTCTGTTTGCCACTTCTGAGAGAGAG
CCAGCTGGAGGGAGGGGAGAAGGAAGATGGCAGCCACATGAGGGAGATTCGGGTCATTCT
CAAGTCTCTGTGAGCTAAGAGGCCCTGCAAGGCCATGATCGGAGCTGCGATCCGATAAAA
TTGCAGACAGGCGAAGCTTGAGGGGGGGTTGGTGAAGCGTCGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915501|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_D05.
(403 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6LP39
Definition tr|A6LP39|A6LP39_THEM4 DEAD/DEAH box helicase domain protein OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
Align length 60
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915501|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_D05.
(403 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6LP39|A6LP39_THEM4 DEAD/DEAH box helicase domain protein OS=... 35 2.5

>tr|A6LP39|A6LP39_THEM4 DEAD/DEAH box helicase domain protein
OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=Tmel_1855 PE=4 SV=1
Length = 901

Score = 34.7 bits (78), Expect = 2.5
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1

Query: 319 LSSQRLENDPNLPHVAAIFLLPSLQLALSQKWQTE*GSFGRTYEQPFLYFFNPSPKSHTS 140
+S+ +EN ++P+ + + S + LSQ +Q G GR+ ++ F YFF+PS + T+
Sbjct: 652 VSTSIIENGIDIPNANTLIVDDSHRYGLSQLYQLR-GRVGRSEKRAFAYFFHPSKINKTA 710