BP915506 |
Clone id |
YMU001_000072_D10 |
Library |
YMU01 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_D10. |
Accession |
BP915506 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2759Contig1 |
Sequence |
ATCCTTTCTTCGGAGGAGATTTCAGTAGTTTGTGTACATGGTACGCTTATGAGCAATCTC AACTCCATACTGAAGACTGGGCTGAAGAAGATGGGAAGAAATCATGTGCATTTTGCTTCT GGTTTACCAAGGGAAGATGGAGTCATAAGTGGTATGAGGCACACAAGTGAGGTGCTTATT TATTTGGATGCAAAGAAAGCCTTGCAAGATGGGATGAAGCTGTATTTATCCGATAATGGT GTGATCTTGACGGAAGGATTCGACGGTGTGGTACCTCCAGAATATTTTGCAAAGATTGCA AGATGGAAGAATGGGAAGATCACCCCTCTGCCATTAAATGTCAAGTCAGAATCCGCCTAA ACTAATCATTGGTGAGATCAGCCTAGATTGGCACGGCAATGGTGCACTCTCTACTCTTGA TAATGTTTACGCTTCAAGTATCTTAGTTGCCACAAAGATTGTTAATTATGTACCAGTTAC CATACAAATGACTACTTGAAGTCCTACACAAAAACGTGCCAGCATAGTGACCTAAAACAC TCTTTGCTTTTTCGTTTTGTCTAGTTCTGATAATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5EAR5 |
Definition |
sp|Q5EAR5|TRPT1_DANRE tRNA 2'-phosphotransferase 1 OS=Danio rerio |
Align length |
105 |
Score (bit) |
91.3 |
E-value |
3.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5VNV8 |
Definition |
tr|Q5VNV8|Q5VNV8_ORYSJ tRNA 2'phosphotransferase-like OS=Oryza sativa subsp. japonica |
Align length |
102 |
Score (bit) |
140.0 |
E-value |
4.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915506|Adiantum capillus-veneris mRNA, clone: YMU001_000072_D10. (576 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5VNV8|Q5VNV8_ORYSJ tRNA 2'phosphotransferase-like OS=Oryza s... 140 4e-32 tr|B8B288|B8B288_ORYSI Putative uncharacterized protein OS=Oryza... 140 4e-32 tr|B8LLX4|B8LLX4_PICSI Putative uncharacterized protein OS=Picea... 137 6e-31 tr|A7PYF3|A7PYF3_VITVI Chromosome chr15 scaffold_37, whole genom... 134 3e-30 tr|A7PYF1|A7PYF1_VITVI Chromosome chr15 scaffold_37, whole genom... 133 6e-30 tr|A9TEB0|A9TEB0_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29 tr|B4FTQ6|B4FTQ6_MAIZE Putative uncharacterized protein OS=Zea m... 127 3e-28 tr|Q2V406|Q2V406_ARATH Uncharacterized protein At2g45330.2 OS=Ar... 127 6e-28 tr|Q0WRN9|Q0WRN9_ARATH Putative uncharacterized protein At2g4533... 127 6e-28 tr|O22139|O22139_ARATH Putative uncharacterized protein At2g4533... 127 6e-28 tr|Q9LT04|Q9LT04_ARATH Similarity to phosphotransferase (At5g236... 118 3e-25 tr|A0BU35|A0BU35_PARTE Chromosome undetermined scaffold_128, who... 103 9e-21 tr|B0DJI2|B0DJI2_LACBS Predicted protein (Fragment) OS=Laccaria ... 102 2e-20 tr|A7ENQ5|A7ENQ5_SCLS1 Putative uncharacterized protein OS=Scler... 100 4e-20 tr|B6PW08|B6PW08_BRAFL Putative uncharacterized protein OS=Branc... 100 6e-20 tr|Q4T8R7|Q4T8R7_TETNG Chromosome undetermined SCAF7739, whole g... 100 8e-20 tr|A0C3K9|A0C3K9_PARTE Chromosome undetermined scaffold_147, who... 100 1e-19 tr|B6KAY1|B6KAY1_TOXGO tRNA 2' phosphotransferase, putative OS=T... 97 5e-19 tr|Q5DHP1|Q5DHP1_SCHJA SJCHGC01721 protein OS=Schistosoma japoni... 97 8e-19 tr|B6KJW0|B6KJW0_TOXGO tRNA splicing 2' phosphotransferase 1, pu... 97 8e-19 tr|Q23CN1|Q23CN1_TETTH RNA 2'-phosphotransferase, Tpt1 / KptA fa... 96 1e-18 tr|Q2H6A6|Q2H6A6_CHAGB Putative uncharacterized protein OS=Chaet... 96 1e-18 tr|B6M812|B6M812_BRAFL Putative uncharacterized protein OS=Branc... 96 2e-18 tr|A8NA91|A8NA91_COPC7 Putative uncharacterized protein OS=Copri... 96 2e-18 tr|B2AX23|B2AX23_PODAN Predicted CDS Pa_7_9080 (Fragment) OS=Pod... 95 2e-18 tr|A4QT01|A4QT01_MAGGR Putative uncharacterized protein OS=Magna... 94 7e-18 tr|B6K5D9|B6K5D9_SCHJP tRNA 2'-phosphotransferase OS=Schizosacch... 93 9e-18 tr|Q7SB59|Q7SB59_NEUCR Putative uncharacterized protein OS=Neuro... 92 2e-17 tr|A6SL23|A6SL23_BOTFB Putative uncharacterized protein OS=Botry... 91 4e-17 tr|Q54L34|Q54L34_DICDI Putative uncharacterized protein OS=Dicty... 91 6e-17
>tr|Q5VNV8|Q5VNV8_ORYSJ tRNA 2'phosphotransferase-like OS=Oryza sativa subsp. japonica GN=P0001H02.6 PE=4 SV=1 Length = 286
Score = 140 bits (354), Expect = 4e-32 Identities = 70/102 (68%), Positives = 81/102 (79%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS++E+SV CVHGT NL+SIL GLK+M R HVHF+SGLP + GVISGMR + +LI Sbjct: 176 ILSADEVSV-CVHGTYRKNLDSILHQGLKRMARLHVHFSSGLPTDGGVISGMRQSVNILI 234
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARW 306 YLD ALQDGMKLY+SDN VILTEGFDGVVP +YF KI W Sbjct: 235 YLDVSMALQDGMKLYISDNKVILTEGFDGVVPVKYFEKIETW 276
>tr|B8B288|B8B288_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21514 PE=4 SV=1 Length = 286
Score = 140 bits (354), Expect = 4e-32 Identities = 70/102 (68%), Positives = 81/102 (79%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS++E+SV CVHGT NL+SIL GLK+M R HVHF+SGLP + GVISGMR + +LI Sbjct: 176 ILSADEVSV-CVHGTYRKNLDSILHQGLKRMARLHVHFSSGLPTDGGVISGMRQSVNILI 234
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARW 306 YLD ALQDGMKLY+SDN VILTEGFDGVVP +YF KI W Sbjct: 235 YLDVSMALQDGMKLYISDNKVILTEGFDGVVPVKYFEKIETW 276
>tr|B8LLX4|B8LLX4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 574
Score = 137 bits (344), Expect = 6e-31 Identities = 68/99 (68%), Positives = 79/99 (79%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS+E++ V CVHGT + NL I K GL +M RNHVHFA GL ++ GVISGMR EV I Sbjct: 466 ILSAEDVPV-CVHGTYLKNLELIKKNGLNRMKRNHVHFARGLSKDSGVISGMRSDCEVFI 524
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKI 297 YLD KKALQ GMKL++S+NGVILTEGF+GVVPPEYFA I Sbjct: 525 YLDTKKALQGGMKLFVSENGVILTEGFNGVVPPEYFANI 563
>tr|A7PYF3|A7PYF3_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026417001 PE=4 SV=1 Length = 228
Score = 134 bits (338), Expect = 3e-30 Identities = 67/109 (61%), Positives = 84/109 (77%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS+EE++V CVHG+ NL SIL++GLK+M R HVHF+ GLP + VISGMR +LI Sbjct: 120 ILSAEEVTV-CVHGSYKRNLESILESGLKRMKRLHVHFSCGLPMDGEVISGMRRDVNLLI 178
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARWKNGKITP 327 +LD +KAL+DGMKLY+SDN VILTEGFDGVVP +YF KI W + + P Sbjct: 179 FLDVRKALEDGMKLYISDNKVILTEGFDGVVPVKYFEKIESWPDRQTIP 227
>tr|A7PYF1|A7PYF1_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026415001 PE=4 SV=1 Length = 229
Score = 133 bits (335), Expect = 6e-30 Identities = 67/109 (61%), Positives = 83/109 (76%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS+EE++V CVHG+ NL SIL++GLK M R HVHF+ GLP + VISGMR +LI Sbjct: 121 ILSAEEVTV-CVHGSYKRNLESILESGLKHMKRLHVHFSCGLPMDGEVISGMRRDVNLLI 179
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARWKNGKITP 327 +LD +KAL+DGMKLY+SDN VILTEGFDGVVP +YF KI W + + P Sbjct: 180 FLDVRKALEDGMKLYISDNKVILTEGFDGVVPVKYFEKIESWPDRQTIP 228
>tr|A9TEB0|A9TEB0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194205 PE=4 SV=1 Length = 227
Score = 132 bits (331), Expect = 2e-29 Identities = 60/92 (65%), Positives = 77/92 (83%) Frame = +1
Query: 28 VCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLIYLDAKKALQ 207 VCVHGT ++SI + GLK+M RNHVHFA+GLP +DGVISGMR +++VLIYLD +KA++ Sbjct: 109 VCVHGTYERFMDSIWQEGLKRMNRNHVHFATGLPEQDGVISGMRGSAQVLIYLDVEKAME 168
Query: 208 DGMKLYLSDNGVILTEGFDGVVPPEYFAKIAR 303 DGMKLY+SDN V+LTEGFDGVVP +YF + + Sbjct: 169 DGMKLYVSDNKVVLTEGFDGVVPTKYFKNVVK 200
>tr|B4FTQ6|B4FTQ6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 248
Score = 127 bits (320), Expect = 3e-28 Identities = 62/102 (60%), Positives = 78/102 (76%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS +E+SV CVHGT NL+SIL+ GLK+M R H+HF+SGLP + V SG+R +LI Sbjct: 138 ILSPDEVSV-CVHGTYRKNLDSILQFGLKRMARLHIHFSSGLPSDGEVTSGVRQNVNILI 196
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARW 306 +LD KAL+ GMKLY+SDN VILTEGFDGVVP +YF ++ W Sbjct: 197 HLDVSKALKGGMKLYISDNKVILTEGFDGVVPVKYFERVETW 238
>tr|Q2V406|Q2V406_ARATH Uncharacterized protein At2g45330.2 OS=Arabidopsis thaliana GN=At2g45330 PE=4 SV=1 Length = 286
Score = 127 bits (318), Expect = 6e-28 Identities = 64/109 (58%), Positives = 78/109 (71%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS EE + VCVHGT NL SIL +GLK+M R HVHF+ GLP + VISGMR V+I Sbjct: 178 ILSPEE-APVCVHGTYRKNLESILASGLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVII 236
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARWKNGKITP 327 +LD KKAL+DG+ Y+SDN VILTEG DGV+P +YF KI W + + P Sbjct: 237 FLDIKKALEDGIAFYISDNKVILTEGIDGVLPVDYFQKIESWPDRQSIP 285
>tr|Q0WRN9|Q0WRN9_ARATH Putative uncharacterized protein At2g45330 (Fragment) OS=Arabidopsis thaliana GN=At2g45330 PE=2 SV=1 Length = 276
Score = 127 bits (318), Expect = 6e-28 Identities = 64/109 (58%), Positives = 78/109 (71%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS EE + VCVHGT NL SIL +GLK+M R HVHF+ GLP + VISGMR V+I Sbjct: 168 ILSPEE-APVCVHGTYRKNLESILASGLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVII 226
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARWKNGKITP 327 +LD KKAL+DG+ Y+SDN VILTEG DGV+P +YF KI W + + P Sbjct: 227 FLDIKKALEDGIAFYISDNKVILTEGIDGVLPVDYFQKIESWPDRQSIP 275
>tr|O22139|O22139_ARATH Putative uncharacterized protein At2g45330 (At2g45330) OS=Arabidopsis thaliana GN=At2g45330 PE=2 SV=1 Length = 257
Score = 127 bits (318), Expect = 6e-28 Identities = 64/109 (58%), Positives = 78/109 (71%) Frame = +1
Query: 1 ILSSEEISVVCVHGTLMSNLNSILKTGLKKMGRNHVHFASGLPREDGVISGMRHTSEVLI 180 ILS EE + VCVHGT NL SIL +GLK+M R HVHF+ GLP + VISGMR V+I Sbjct: 149 ILSPEE-APVCVHGTYRKNLESILASGLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVII 207
Query: 181 YLDAKKALQDGMKLYLSDNGVILTEGFDGVVPPEYFAKIARWKNGKITP 327 +LD KKAL+DG+ Y+SDN VILTEG DGV+P +YF KI W + + P Sbjct: 208 FLDIKKALEDGIAFYISDNKVILTEGIDGVLPVDYFQKIESWPDRQSIP 256
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