BP915509 |
Clone id |
YMU001_000072_E01 |
Library |
YMU01 |
Length |
586 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_E01. |
Accession |
BP915509 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL685Contig1 |
Sequence |
AGGCAGCTCATTGTCAAAATGGAATCACCGAGCTATTTTCACCTTAGGCCACACATAGTC AAGACACAAAAGTTCATGCGATTGTCAATAAGTATAGAGAAAATCAATGAAAGGGGACAA TTTGTGGCTCAGAGCCCTTTAAGAGTATCTCTGAGTCCCTGATAGATAGCAATCACACTT ATGGTCCTTGGAAAAAGGATCCTGACAAGACAATGCGTCTTAAAAATTCATTCGAATGCA CCTTCCATAAGGTGCACCCCTCTCTATTCTCTGTTAACTTTTGCAGCTTATCTAGGAAAA TTGGATTTCCGCGGATATGATAAAGGGAACCTGGTGCAAACAGTTCTTCAACAGGATGCA GCAGTTGCGTACTTTCAGCTATCAAGGCACTCTTTTCAGTAACCTGCTTTTGAGTATCCT TGCATTCTTTCTGTACGGCTGGCCCAAATCGACCGGCATAAGCTGTATATCTTCGGGCGA CTTCCTGCACTGAAGACAAAGCCTGCACTGTACTGGCAACCAAGTCCAAAACCCCCTTTC GTTCCTCTGCTTCTTTGCGAAAGCTAGCCCAGTCTAGCTCAAGAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P47825 |
Definition |
sp|P47825|TAF4_DROME Transcription initiation factor TFIID subunit 4 OS=Drosophila melanogaster |
Align length |
85 |
Score (bit) |
32.0 |
E-value |
2.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SLB5 |
Definition |
tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g42450 OS=Arabidopsis thaliana |
Align length |
137 |
Score (bit) |
63.5 |
E-value |
8.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915509|Adiantum capillus-veneris mRNA, clone: YMU001_000072_E01. (586 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g4245... 64 8e-09 tr|Q651A9|Q651A9_ORYSJ Putative uncharacterized protein B1331F11... 60 1e-07 tr|Q651A8|Q651A8_ORYSJ Putative uncharacterized protein B1331F11... 60 1e-07 tr|Q0IZF7|Q0IZF7_ORYSJ Os09g0571500 protein (Fragment) OS=Oryza ... 60 1e-07 tr|B8BEU2|B8BEU2_ORYSI Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A3C1Q9|A3C1Q9_ORYSJ Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A5AVV6|A5AVV6_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07 tr|A7QVS2|A7QVS2_VITVI Chromosome chr7 scaffold_192, whole genom... 57 8e-07 tr|B3NG81|B3NG81_DROER GG14151 OS=Drosophila erecta GN=GG14151 P... 35 2.4 tr|Q8R5Q7|Q8R5Q7_THETN Predicted Transcriptional regulator OS=Th... 35 4.1 tr|A1WZH7|A1WZH7_HALHL DNA topoisomerase OS=Halorhodospira halop... 34 5.3 tr|B7DPW9|B7DPW9_9BACL Acyl-CoA dehydrogenase domain protein OS=... 34 5.3 tr|Q3BNK0|Q3BNK0_XANC5 DNA topoisomerase OS=Xanthomonas campestr... 34 7.0 tr|B4BHJ8|B4BHJ8_CLOTM Adenylate/guanylate cyclase with TPR repe... 34 7.0 tr|A9V1N1|A9V1N1_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.1
>tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g42450 OS=Arabidopsis thaliana GN=At2g42450 PE=2 SV=1 Length = 508
Score = 63.5 bits (153), Expect = 8e-09 Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 7/137 (5%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKECKDTQKQ 404 L+ DW S E EE K VLDLV + Q ++SVQ+VAR+ + YA FG +KE + Sbjct: 350 LQTDWTSVI-EKEEWKNVLDLVTNAKQVVTSVQDVARKVSDYA-NFGN--KKEVPEIPSS 405
Query: 403 VTEKSA-LIAEST--QLLHPVEELFAPGSLYH----IRGNPIFLDKLQKLTENREGCTLW 245 +S LI++ST ++ EEL+ PG++Y+ +RG P + E +LW Sbjct: 406 KNNQSGILISDSTTKDVVKLPEELYVPGAVYYLMRSLRGTP-----KSSAGKQVEYYSLW 460
Query: 244 KVHSNEFLRRIVLSGSF 194 K + +RI+LSG+F Sbjct: 461 KRDPGQHFQRILLSGNF 477
>tr|Q651A9|Q651A9_ORYSJ Putative uncharacterized protein B1331F11.10-1 OS=Oryza sativa subsp. japonica GN=B1331F11.10-1 PE=4 SV=1 Length = 518
Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKEC-KDTQK 407 L+ DW S E E+ K ++D+V + +SS+Q+VAR+ YA + + KD + Sbjct: 368 LKTDWVSVL-EKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDR 426
Query: 406 QVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNE 227 ++ L +S + + E+LF PG+LY+++ + ++ ++ E TLW+ + E Sbjct: 427 PLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVED-----ESYTLWRGDAGE 481
Query: 226 FLRRIVLSGS 197 +RI+LSG+ Sbjct: 482 NFQRILLSGN 491
>tr|Q651A8|Q651A8_ORYSJ Putative uncharacterized protein B1331F11.10-2 OS=Oryza sativa subsp. japonica GN=B1331F11.10-2 PE=4 SV=1 Length = 328
Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKEC-KDTQK 407 L+ DW S E E+ K ++D+V + +SS+Q+VAR+ YA + + KD + Sbjct: 178 LKTDWVSVL-EKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDR 236
Query: 406 QVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNE 227 ++ L +S + + E+LF PG+LY+++ + ++ ++ E TLW+ + E Sbjct: 237 PLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVED-----ESYTLWRGDAGE 291
Query: 226 FLRRIVLSGS 197 +RI+LSG+ Sbjct: 292 NFQRILLSGN 301
>tr|Q0IZF7|Q0IZF7_ORYSJ Os09g0571500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os09g0571500 PE=4 SV=1 Length = 382
Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKEC-KDTQK 407 L+ DW S E E+ K ++D+V + +SS+Q+VAR+ YA + + KD + Sbjct: 232 LKTDWVSVL-EKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDR 290
Query: 406 QVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNE 227 ++ L +S + + E+LF PG+LY+++ + ++ ++ E TLW+ + E Sbjct: 291 PLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVED-----ESYTLWRGDAGE 345
Query: 226 FLRRIVLSGS 197 +RI+LSG+ Sbjct: 346 NFQRILLSGN 355
>tr|B8BEU2|B8BEU2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32476 PE=4 SV=1 Length = 328
Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKEC-KDTQK 407 L+ DW S E E+ K ++D+V + +SS+Q+VAR+ YA + + KD + Sbjct: 178 LKTDWVSVL-EKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDR 236
Query: 406 QVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNE 227 ++ L +S + + E+LF PG+LY+++ + ++ ++ E TLW+ + E Sbjct: 237 PLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVED-----ESYTLWRGDAGE 291
Query: 226 FLRRIVLSGS 197 +RI+LSG+ Sbjct: 292 NFQRILLSGN 301
>tr|A3C1Q9|A3C1Q9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029231 PE=4 SV=1 Length = 442
Score = 59.7 bits (143), Expect = 1e-07 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Frame = -1
Query: 583 LELDWASFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKEC-KDTQK 407 L+ DW S E E+ K ++D+V + +SS+Q+VAR+ YA + + KD + Sbjct: 292 LKTDWVSVL-EKEDWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDR 350
Query: 406 QVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNE 227 ++ L +S + + E+LF PG+LY+++ + ++ ++ E TLW+ + E Sbjct: 351 PLSTSEVLSPDSKEDVFVPEDLFLPGTLYYLKRDIEDINGVED-----ESYTLWRGDAGE 405
Query: 226 FLRRIVLSGS 197 +RI+LSG+ Sbjct: 406 NFQRILLSGN 415
>tr|A5AVV6|A5AVV6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026016 PE=4 SV=1 Length = 176
Score = 57.4 bits (137), Expect = 6e-07 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 24/143 (16%) Frame = -1
Query: 553 EAEERKGVLDLVASTVQALSSVQEVARRYTAYA---------GRFGPAVQKECKDTQ--- 410 E E+ + V+ LV + Q ++SVQ+VA + YA G PA+ K+ ++T+ Sbjct: 5 EKEDWRSVIGLVTNAKQVVTSVQDVASKLADYAKFRSMTGSSGEPRPALAKKQENTRFGK 64
Query: 409 ------------KQVTEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTEN 266 K+ E SA++ + EELF PG++Y+++ N + +E Sbjct: 65 ESATTPSISSTSKRTAENSAVVRKEAAATKVPEELFVPGTVYYLKRN-VETQSSSSNSEG 123
Query: 265 REGCTLWKVHSNEFLRRIVLSGS 197 RE TL + H E +RIVLS + Sbjct: 124 REFFTLHRRHPGEHFQRIVLSSN 146
>tr|A7QVS2|A7QVS2_VITVI Chromosome chr7 scaffold_192, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007497001 PE=4 SV=1 Length = 675
Score = 57.0 bits (136), Expect = 8e-07 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 9/128 (7%) Frame = -1
Query: 553 EAEERKGVLDLVASTVQALSSVQEVARRYTAYA---------GRFGPAVQKECKDTQKQV 401 E E+ + V+ LV + Q ++SVQ+VA + YA G PA+ K+ +++ Sbjct: 520 EKEDWRSVMGLVTNAKQVVTSVQDVASKLADYAKFRSMTGSSGEPRPALAKK-QESFILT 578
Query: 400 TEKSALIAESTQLLHPVEELFAPGSLYHIRGNPIFLDKLQKLTENREGCTLWKVHSNEFL 221 E SA++ + EELF PG++Y+++ N + +E RE TL + H E Sbjct: 579 AENSAVVRKEAAATKVPEELFVPGTVYYLKRN-VETQSSSSNSEGREFFTLHRRHPGEHF 637
Query: 220 RRIVLSGS 197 +RIVLS + Sbjct: 638 QRIVLSSN 645
>tr|B3NG81|B3NG81_DROER GG14151 OS=Drosophila erecta GN=GG14151 PE=4 SV=1 Length = 981
Score = 35.4 bits (80), Expect = 2.4 Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 7/89 (7%) Frame = -1
Query: 565 SFRKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQK--ECKDTQKQVTEK 392 +F++ ++RK +LD + +++ V + A++ ++ G A + E K K+ + Sbjct: 134 NFQEMEQKRKNILDALTVAIKSSQLVPKDAKKCASHTKSIGEATKPTAEVKLNHKKKQKP 193
Query: 391 SALIAEST-----QLLHPVEELFAPGSLY 320 +L A++T +L +EEL +PG++Y Sbjct: 194 KSLRAKATSDHIQRLCDEIEELSSPGNMY 222
>tr|Q8R5Q7|Q8R5Q7_THETN Predicted Transcriptional regulator OS=Thermoanaerobacter tengcongensis GN=Spo0J3 PE=4 SV=1 Length = 425
Score = 34.7 bits (78), Expect = 4.1 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Frame = -1
Query: 559 RKEAEERKGVLDLVASTVQALSSVQEVARRYTAYAGRFGPAVQKECKDTQKQVTEKSALI 380 RK EE++ L+ A +A + ++ + ++G +K+C+ K + E +I Sbjct: 311 RKALEEKRQALEEKA---RAEAEIKNIKYELEQLKQQYGIEAKKQCELADKLIEEIKKVI 367
Query: 379 AESTQLLHPVEELFAPGSLYHIRGNP--IFLDKLQKLTENRE 260 A +T +L ++ P Y+ IF+DKL+KL ++ E Sbjct: 368 ATATGILELMDIEKLPDYKYNDFSTTLIIFIDKLEKLYQSAE 409
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