BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915525|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_F05.
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7V9M1|UVRB_PROMA UvrABC system protein B OS=Prochlorococcus ...    32   1.3  
sp|Q71F56|MD13L_HUMAN Mediator of RNA polymerase II transcriptio...    30   5.0  
sp|P45680|USPA2_COXBU Universal stress protein A homolog 2 OS=Co...    30   6.5  

>sp|Q7V9M1|UVRB_PROMA UvrABC system protein B OS=Prochlorococcus
           marinus GN=uvrB PE=3 SV=1
          Length = 677

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
 Frame = -3

Query: 401 VAKIILLEAKKKG--EESQSGLCTVDNFCKHLVGKSLSELITRPMTDKEKKLAKAQLHFN 228
           V+ +++L+A K+G     +S + T+    +H+ GK+L  L     TD  KK  +      
Sbjct: 513 VSLVVILDADKEGFLRAERSLIQTIGRAARHIEGKAL--LYADNFTDSMKKAIEETERRR 570

Query: 227 SFRRIYKKLSDMT--------FDDFLHFAERGCAVQCVAGAWGVDLIIFAFTGDDGDELK 72
           + +  Y + +++          +  L F E    VQ      G+D  +    G+  DE K
Sbjct: 571 AIQESYNQQNNIVPMPAGKKANNSILSFLELSRRVQ----KDGIDNDLVEIAGNVVDEFK 626

Query: 71  LNNTTAIYVQ 42
            NN + + ++
Sbjct: 627 FNNNSELAIE 636


>sp|Q71F56|MD13L_HUMAN Mediator of RNA polymerase II transcription
            subunit 13-like OS=Homo sapiens GN=MED13L PE=1 SV=1
          Length = 2210

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
 Frame = +2

Query: 155  SLAQQSAKSHQMSYQRASCKSFEMS*NATGLWLISFPCQSLVA*SVLTMTFQPSACRNYP 334
            SL Q  A S  M+Y     K    S   T L ++  P  S+V+  +     +       P
Sbjct: 870  SLEQHPAFSPVMNY-----KDGISSETVTALGMMESPMVSMVSTQLTEFKMEVEDGLGSP 924

Query: 335  QCRGQTDFPLL----SFSPLEV*S*LPAPL*IPCQSNQLPAHSLVRYKVPDSCL 484
            +     DF  +    SF P  V S + APL        LP+H L+  K+PD+CL
Sbjct: 925  KPEEIKDFSYVHKVPSFQPF-VGSSMFAPL------KMLPSHCLLPLKIPDACL 971


>sp|P45680|USPA2_COXBU Universal stress protein A homolog 2
           OS=Coxiella burnetii GN=uspA2 PE=1 SV=1
          Length = 146

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 34/127 (26%)
 Frame = -3

Query: 335 VDNFCKHLVGKSLSELITRPMTDKEKKLA---KAQL-------HFNSFRRIYKKLSDMTF 186
           +DN+ K LV  +L     RP+ +K K+L+    AQL       H +S+   Y   + +  
Sbjct: 1   MDNYKKILVALALDPNSDRPLVEKAKELSANRDAQLYLIHAVEHLSSYGAAYGVAAGVDV 60

Query: 185 DDFL---------------------HFAERGCAVQCV---AGAWGVDLIIFAFTGDDGDE 78
           +D L                        + G A   +   A  WGVDLII    G  G +
Sbjct: 61  EDMLLEEAKKRMNEIASQLNISSDHQIVKVGPAKFLILEQAKNWGVDLIIVGSHGRHGIQ 120

Query: 77  LKLNNTT 57
           L L +T+
Sbjct: 121 LLLGSTS 127

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915525|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_F05.
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0CU52|B0CU52_LACBS Predicted protein OS=Laccaria bicolor (st...    41   0.037
tr|B0CUF9|B0CUF9_LACBS Predicted protein OS=Laccaria bicolor (st...    39   0.14 
tr|Q2RLM0|Q2RLM0_MOOTA Type II secretion system protein E OS=Moo...    33   7.8  

>tr|B0CU52|B0CU52_LACBS Predicted protein OS=Laccaria bicolor (strain
            S238N-H82) GN=LACBIDRAFT_321782 PE=4 SV=1
          Length = 1012

 Score = 40.8 bits (94), Expect = 0.037
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
 Frame = -3

Query: 443  LAAGWIDRGFTGELVAKIILLEAKKKGEESQSG-LCTVDNFCK--HLVGK----SLSELI 285
            LA   I  G  GE +A+IIL+  +     +  G LC VD   K   +V +    S  +L 
Sbjct: 658  LANDIISIGEKGETLARIILIVTRDATVAAAGGQLCNVDTSSKPNKIVEENNRGSHLQLA 717

Query: 284  TRPMTDK--------EKKLAKA--------QLHFNSFRRIYKKLSDMTFDDFLHFA-ERG 156
             RP T K        E+ + KA         L+F  F ++   + +    +FL    +RG
Sbjct: 718  VRPFTLKLFLQNLLNEEHIRKAGLQWTEDVHLNFTHFAQLSNFVDETVTVEFLVMCWQRG 777

Query: 155  CAVQCVAGAWGVDLIIFAFTGDDGDELKLNNTTAIYVQVKLRG 27
             A+QCV     +D I+  ++GD  +         + +Q K RG
Sbjct: 778  VALQCVHNQAVIDAILVGYSGDLSEPFDPEKFVFVVLQFKNRG 820


>tr|B0CUF9|B0CUF9_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_305519 PE=4 SV=1
          Length = 840

 Score = 38.9 bits (89), Expect = 0.14
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
 Frame = -3

Query: 467 LYTSLVNALAAGWIDRGFTGELVAKIILLEAKKK-----GEESQSGL--CTVDNFCKHLV 309
           L T  ++    G +D+G  GEL  +I+LL A+       G  S++ L   +V  F   L+
Sbjct: 500 LKTLNMSLCGVGLVDKGLLGELAGRILLLFARDMAAPTIGRISKNLLVPISVMAFLDRLL 559

Query: 308 GKSLSELITRPM-TDKEKKLAKAQLHFNSFRRIYKKLSDMTFDDFL-HFAERGCAVQCVA 135
           GK   E   +P  T+     +K  ++F  +      L        L +   RG A+QC  
Sbjct: 560 GK---EGWCQPYETEYTNAFSKTFINFTHWILTSDPLPAQPSRQLLENLWARGAALQCCF 616

Query: 134 GAWGVDLIIFAFTGDDG--DELKLNNTTAIYVQVKLRGKDD 18
               +D +I  ++G  G  D       +AI VQ+K +G+ D
Sbjct: 617 NQEAIDFLIVTYSGSIGATDIFDPTMLSAIVVQIKNKGQAD 657


>tr|Q2RLM0|Q2RLM0_MOOTA Type II secretion system protein E
           OS=Moorella thermoacetica (strain ATCC 39073)
           GN=Moth_0335 PE=4 SV=1
          Length = 452

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 18/72 (25%), Positives = 38/72 (52%)
 Frame = -3

Query: 221 RRIYKKLSDMTFDDFLHFAERGCAVQCVAGAWGVDLIIFAFTGDDGDELKLNNTTAIYVQ 42
           R + K++ D    +         A +  + AWG+D++  A+   + DE+++N  +A+++Q
Sbjct: 69  RELIKEILDKYQVEVEGMTREQLAREIFSYAWGLDVLEEAYYDPEVDEIRVNGPSAVFIQ 128

Query: 41  VKLRGKDDATNV 6
              RGK+  T +
Sbjct: 129 --KRGKNVKTGI 138