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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915531
Clone id YMU001_000072_G01
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCTAGAGAAGGCCATAGAAGTCGAAGCCTGGAGAATAAAGAACAAAGCATGGAAGCAGC
TAGGGTGTAGTTTGTGGACCACTATCAATAATAAGGTGCTGATTTTTGTGTTGTGATACA
AAAGATTCACAGCCATGAAGTATTTAAGCTGAAGGATTTACAGGCATGAAGTATTCAATA
GAAGCTGGAGGATATCATGTCAAGGAAGGGCACTCCCCAAAGTTGAGTTGAGTGCCACAA
ACTGGTCTGAATGTTTAGAAGGGCACAATTCCTTTCTCGCCATCATAAGACCCTGCATAC
ATCTCATAGAGATAGCATTGTGAACATGCAAGTGTGTTTGGTTACCGGCCAAGATACAAT
ATGGATTTTTTCCCATGAGTGCAGCTTTGTAATAAGGATTTCAAGATTTGTGGAACCATA
TATGATAATCTATGATTTGTGAAATGATGGAAAACATGAT
■■Homology search results ■■ -
sp_hit_id Q8QG92
Definition sp|Q8QG92|DCT1B_XENLA Dapper 1-B OS=Xenopus laevis
Align length 33
Score (bit) 29.6
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915531|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_G01.
         (460 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8QG92|DCT1B_XENLA Dapper 1-B OS=Xenopus laevis GN=dact1-B PE...    30   6.5  

>sp|Q8QG92|DCT1B_XENLA Dapper 1-B OS=Xenopus laevis GN=dact1-B PE=1
           SV=1
          Length = 824

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 9/33 (27%), Positives = 24/33 (72%)
 Frame = -1

Query: 409 KS*NPYYKAALMGKNPYCILAGNQTHLHVHNAI 311
           K+ +P+++ A++G+NP  + +G+++H H  + +
Sbjct: 622 KTAHPHFEPAVVGRNPVAVRSGSKSHGHSKDVV 654
tr_hit_id A8P5C3
Definition tr|A8P5C3|A8P5C3_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 36
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915531|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_G01.
         (460 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8P5C3|A8P5C3_COPC7 Predicted protein OS=Coprinopsis cinerea ...    35   1.9  

>tr|A8P5C3|A8P5C3_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05460 PE=4
           SV=1
          Length = 908

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +3

Query: 201 QGRALPKVELSA--TNWSECLEGHNSFLAIIRPCIH 302
           +G A PKVEL+   T+ S CL  H S LAI++PC H
Sbjct: 408 EGLAPPKVELAEPPTDCSVCLVSHPSSLAILQPCGH 443