BP915537
Clone id YMU001_000072_G07
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGGAATTTGGAGCACACAGGTGGAGCTTCTTTCACTGGTTTTCACAAAATACTTTGGCA
GTGGTTTTGTGCTTGGATTCATGGTCTTTGCGGACGGTTTGCATGTGGTTATGGCACATG
GTTGATGCCCATTATATATGCATTTTGGCGAGCACTTTCAACTGCCGGTAAGCTCTCTTG
AGAGCATTGTTTTCGCATTGATCAAGTTTCCGGATTGCAAATCTTTGGGCGTTTGCTTAT
GCGCAGTCACTCCGTTGATGTACGTTGAGTGCGGATTGACATTGTATGTGAAAATGTGGA
GCCATTTTAGCATTTCTACTCATTGGCATTGAGTAGTGTTATGGTTTATGGTACAGATTG
TACTTGAGTTTTTTGCTCAGTTTTCAGGGGAAATTCTGTCGGATTTTTCCCAGATTCTCG
CCATAGTTTGTGATCGAGTGTGTACTCTCACTTTGACAGGTTTTGTCAGTTTGGACAC
■■Homology search results ■■ -
sp_hit_id O70513
Definition sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegicus
Align length 33
Score (bit) 31.6
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915537|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_G07.
(478 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegi... 32 1.9
sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus... 31 3.3
sp|Q14790|CASP8_HUMAN Caspase-8 OS=Homo sapiens GN=CASP8 PE=1 SV=1 30 7.4
sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisser... 29 9.6

>sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegicus
GN=Lgals3bp PE=1 SV=2
Length = 574

Score = 31.6 bits (70), Expect = 1.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1

Query: 94 TVCMWLWHMVDAHYICILASTFNCR*ALLRALF 192
TVC LW+++DAH +C N AL RA F
Sbjct: 47 TVCDNLWNLLDAHVVCRALGYENATQALSRAAF 79


>sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus
GN=Lgals3bp PE=1 SV=1
Length = 577

Score = 30.8 bits (68), Expect = 3.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1

Query: 94 TVCMWLWHMVDAHYICILASTFNCR*ALLRALF 192
TVC LW+++DAH +C N AL RA F
Sbjct: 47 TVCDNLWNLLDAHVVCRALGYENATQALGRAAF 79


>sp|Q14790|CASP8_HUMAN Caspase-8 OS=Homo sapiens GN=CASP8 PE=1 SV=1
Length = 479

Score = 29.6 bits (65), Expect = 7.4
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -1

Query: 205 LINAKTMLSRELTGS*KCSPKCIYNGHQPCAITTCKPSAKTMNPSTKPLPKYFVKTSERS 26
+IN S+E + S + SP NG + C + T S + + ++ L K + S+
Sbjct: 174 IINDYEEFSKERSSSLEGSPDEFSNGEELCGVMTISDSPREQDSESQTLDKVYQMKSKPR 233

Query: 25 STCVL 11
C++
Sbjct: 234 GYCLI 238


>sp|Q9JZ25|Y1327_NEIMB Uncharacterized protein NMB1327 OS=Neisseria
meningitidis serogroup B GN=NMB1327 PE=1 SV=1
Length = 467

Score = 29.3 bits (64), Expect = 9.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1

Query: 316 EMLKWLHIFTYNVNPHSTYINGVTAHKQTPKDLQSGNLINAKT 188
E L+W N NPH Y+ TP D ++ +L+ K+
Sbjct: 125 EALEWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETAHLLYRKS 167


tr_hit_id B1HU43
Definition tr|B1HU43|B1HU43_LYSSC Spore germination protein GerHB OS=Lysinibacillus sphaericus (strain C3-41)
Align length 55
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915537|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_G07.
(478 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1HU43|B1HU43_LYSSC Spore germination protein GerHB OS=Lysini... 33 7.0
tr|A3I8R6|A3I8R6_9BACI Spore germination protein OS=Bacillus sp.... 33 7.0
tr|A3TV78|A3TV78_9RHOB Nickel-iron hydrogenase, accessory protei... 33 9.2

>tr|B1HU43|B1HU43_LYSSC Spore germination protein GerHB
OS=Lysinibacillus sphaericus (strain C3-41) GN=gerHB
PE=4 SV=1
Length = 352

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +2

Query: 101 ACGYGTWLMPIIY------AFWRALSTAGKLS*EHCFRIDQVSGLQIFGRLLMRS 247
A GY W MP+++ W + K EH FRI+++ +FG++L +S
Sbjct: 29 AMGYTEWFMPVLFGIIATLTLWPMIWLCSKYPNEHLFRINEI----LFGKVLGKS 79


>tr|A3I8R6|A3I8R6_9BACI Spore germination protein OS=Bacillus sp.
B14905 GN=BB14905_01235 PE=4 SV=1
Length = 352

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +2

Query: 101 ACGYGTWLMPIIY------AFWRALSTAGKLS*EHCFRIDQVSGLQIFGRLLMRS 247
A GY W MP+++ W + K EH FRI+++ +FG++L +S
Sbjct: 29 AMGYTEWFMPVLFGIIATLTLWPMIWLCSKYPNEHLFRINEI----LFGKVLGKS 79


>tr|A3TV78|A3TV78_9RHOB Nickel-iron hydrogenase, accessory protein
OS=Oceanicola batsensis HTCC2597 GN=OB2597_09779 PE=4
SV=1
Length = 198

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Frame = +2

Query: 14 HTGGASFTGFHKILWQWFCAWIH-------GLCGRFACGYGTWLMPIIYAFWRALSTA 166
HTG TGF W W H GL G F WL+P+++ AL A
Sbjct: 26 HTGEGINTGFASGFWHPILGWDHVVAMVAVGLWGAFLGMPALWLLPVVFPLVMALGGA 83