| BP915542 |
| Clone id |
YMU001_000072_H01 |
| Library |
YMU01 |
| Length |
577 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_H01. |
| Accession |
BP915542 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CGCTTCAAGAACAAATGGTTTGGAGGCCGAAAGGATGTAAGCTATGCTGAAGTTGAAGAG GAGTTTTGGAGTGTGGTAGAGAGGTGCAAGGGCCCTGTAGAAGTTCTGTATGGCAGTGAC TTAGCGAGTGAAGTGTATGGAAGTGGTTTCCCAAGGCCTTTAGATCGGGTTCCCCCCTCA GTAGATAAACATGTATGGAATGAGTATGTTAATAGCCCCTGGAATCTAAACAACTTTCCA AAGCTGGACGGTTCTGTCTTGAAGCATGTGCAGGAAAACATTCCTGGAGTAACAGTGCCT TGGGTTTACATGGGGATGCTGTTTTCTTCTTTCTGCTGGCATTATGAAGATCAATGCTTT TACTCCATCAACTATCTTCACTGGGGAGAGCCGAAATGCTGGTATGGTGTTCCTGGCAGT GCTGTAGATGCTTTTGAACAGGTCATGCACAAAACTTTCCCTGATCTATTTGAAGCACAG CCTGACTTGCTGTTTCAGCTGGTTACAATGTTGAATCCAAAGGTGCTACGTGAGAATGAT GTACCTGTCTGTACGACCATTCAGGAGCGCGGTAACT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q80Y84 |
| Definition |
sp|Q80Y84|JAD1B_MOUSE Histone demethylase JARID1B OS=Mus musculus |
| Align length |
174 |
| Score (bit) |
192.0 |
| E-value |
8.0e-49 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9SH34 |
| Definition |
tr|Q9SH34|Q9SH34_ARATH F2K11.14 OS=Arabidopsis thaliana |
| Align length |
192 |
| Score (bit) |
283.0 |
| E-value |
6.0e-75 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915542|Adiantum capillus-veneris mRNA, clone: YMU001_000072_H01. (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SH34|Q9SH34_ARATH F2K11.14 OS=Arabidopsis thaliana PE=4 SV=1 283 6e-75 tr|A7QIW2|A7QIW2_VITVI Chromosome chr2 scaffold_105, whole genom... 269 7e-71 tr|A5BNM2|A5BNM2_VITVI Putative uncharacterized protein OS=Vitis... 268 2e-70 tr|A9THZ2|A9THZ2_PHYPA Predicted protein (Fragment) OS=Physcomit... 264 2e-69 tr|A9TI08|A9TI08_PHYPA Predicted protein OS=Physcomitrella paten... 259 6e-68 tr|Q94BQ7|Q94BQ7_ARATH Putative RB-binding protein OS=Arabidopsi... 251 2e-65 tr|B8B2Y1|B8B2Y1_ORYSI Putative uncharacterized protein OS=Oryza... 200 5e-50 tr|A7QC14|A7QC14_VITVI Chromosome chr10 scaffold_76, whole genom... 198 2e-49 tr|A3BFN7|A3BFN7_ORYSJ Putative uncharacterized protein OS=Oryza... 197 3e-49 tr|B7QJG8|B7QJG8_IXOSC Jumonji/ARID domain-containing protein, p... 197 3e-49 tr|Q3TQL9|Q3TQL9_MOUSE Putative uncharacterized protein OS=Mus m... 194 3e-48 tr|A7QMV3|A7QMV3_VITVI Chromosome chr14 scaffold_128, whole geno... 193 7e-48 tr|Q9UFD3|Q9UFD3_HUMAN Putative uncharacterized protein DKFZp434... 192 9e-48 tr|B3KV94|B3KV94_HUMAN cDNA FLJ16281 fis, clone NT2RI3003104, hi... 192 9e-48 tr|B3KMS8|B3KMS8_HUMAN cDNA FLJ12491 fis, clone NT2RM2001605, hi... 192 9e-48 tr|Q4STB9|Q4STB9_TETNG Chromosome 19 SCAF14245, whole genome sho... 192 1e-47 tr|Q921T5|Q921T5_MOUSE Jarid1a protein OS=Mus musculus GN=Jarid1... 192 1e-47 tr|B4LR76|B4LR76_DROVI GJ12537 OS=Drosophila virilis GN=GJ12537 ... 192 1e-47 tr|B4KGG5|B4KGG5_DROMO GI11300 OS=Drosophila mojavensis GN=GI113... 191 2e-47 tr|B4JC22|B4JC22_DROGR GH10714 OS=Drosophila grimshawi GN=GH1071... 191 2e-47 tr|B5DH42|B5DH42_DROPS GA25342 OS=Drosophila pseudoobscura pseud... 191 2e-47 tr|B4G6L2|B4G6L2_DROPE GL19092 OS=Drosophila persimilis GN=GL190... 191 2e-47 tr|B4DVM9|B4DVM9_HUMAN cDNA FLJ50247, highly similar to Jumonji/... 191 2e-47 tr|A8MUS2|A8MUS2_HUMAN Jumonji, AT rich interactive domain 1A (R... 191 2e-47 tr|Q4SS52|Q4SS52_TETNG Chromosome 11 SCAF14479, whole genome sho... 190 4e-47 tr|B4Q456|B4Q456_DROSI GD22615 OS=Drosophila simulans GN=GD22615... 190 4e-47 tr|B4NZS6|B4NZS6_DROYA GE18962 OS=Drosophila yakuba GN=GE18962 P... 190 4e-47 tr|B4I1N7|B4I1N7_DROSE GM17977 OS=Drosophila sechellia GN=GM1797... 190 4e-47 tr|B3N5A4|B3N5A4_DROER GG24264 OS=Drosophila erecta GN=GG24264 P... 190 4e-47 tr|B3MMQ4|B3MMQ4_DROAN GF14289 OS=Drosophila ananassae GN=GF1428... 190 4e-47
>tr|Q9SH34|Q9SH34_ARATH F2K11.14 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1518
Score = 283 bits (723), Expect = 6e-75 Identities = 127/192 (66%), Positives = 153/192 (79%) Frame = +1
Query: 1 RFKNKWFGGRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPPS 180 R K KWFG VS ++E++FW +VE G VEV+YG+DL + VYGSGFPR D+ P S Sbjct: 313 RAKRKWFGSGT-VSRTQIEKKFWEIVEGSGGEVEVMYGNDLDTSVYGSGFPRIGDQRPES 371
Query: 181 VDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQCF 360 V+ +W+EY SPWNLNN PKL GS+L+ ++ NI GVTVPW+Y+GMLFSSFCWH+ED CF Sbjct: 372 VEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNINGVTVPWLYLGMLFSSFCWHFEDHCF 431
Query: 361 YSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREND 540 YS+NYLHWGE KCWYG+PGSA AFE+VM KT PDLF+AQPDLLFQLVTML+P VL+EN Sbjct: 432 YSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPDLFDAQPDLLFQLVTMLSPTVLQENK 491
Query: 541 VPVCTTIQERGN 576 VPV T +QE GN Sbjct: 492 VPVYTVLQEPGN 503
>tr|A7QIW2|A7QIW2_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000415001 PE=4 SV=1 Length = 540
Score = 269 bits (688), Expect = 7e-71 Identities = 123/192 (64%), Positives = 146/192 (76%) Frame = +1
Query: 1 RFKNKWFGGRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPPS 180 R K KWFG S ++E++FW +VE G VEV+YGSDL + VYGSGFPR D+ P S Sbjct: 266 RAKRKWFGSVSP-SRMQIEKKFWEIVEGLVGEVEVMYGSDLDTSVYGSGFPRVNDKKPES 324
Query: 181 VDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQCF 360 V+ +W++Y SPWNLNN PKL GS+L+ V NI GV VPW+Y+GMLFSSFCWH+ED CF Sbjct: 325 VEDEIWDKYCASPWNLNNLPKLQGSMLRAVHNNIAGVMVPWLYVGMLFSSFCWHFEDHCF 384
Query: 361 YSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREND 540 YS+NYLHWGEPKCWY VPGS AFE+VM PDLF+AQPDLLFQLVTML+P VL+EN Sbjct: 385 YSMNYLHWGEPKCWYSVPGSEAIAFEKVMRNCLPDLFDAQPDLLFQLVTMLDPSVLQENG 444
Query: 541 VPVCTTIQERGN 576 V V + IQE GN Sbjct: 445 VSVYSVIQEPGN 456
>tr|A5BNM2|A5BNM2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023035 PE=4 SV=1 Length = 692
Score = 268 bits (685), Expect = 2e-70 Identities = 122/192 (63%), Positives = 145/192 (75%) Frame = +1
Query: 1 RFKNKWFGGRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPPS 180 R K KWFG S ++E++FW +VE G VEV+YGSDL + VYGSGFPR D+ P S Sbjct: 370 RAKRKWFGSVSP-SRMQIEKKFWEIVEGLVGEVEVIYGSDLDTSVYGSGFPRVNDKKPES 428
Query: 181 VDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQCF 360 V+ +W++Y SPWNLNN PKL GS+L+ V NI GV VPW+Y+GMLFSSFCWH+ED CF Sbjct: 429 VEDEIWDKYCASPWNLNNLPKLQGSMLRAVHXNIAGVMVPWLYVGMLFSSFCWHFEDHCF 488
Query: 361 YSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREND 540 YS+NYLHWGEPKCWY VPGS AFE+VM PDLF+AQPDLLFQLVTML+P VL+EN Sbjct: 489 YSMNYLHWGEPKCWYSVPGSEAIAFEKVMRNCLPDLFDAQPDLLFQLVTMLBPSVLQENG 548
Query: 541 VPVCTTIQERGN 576 V V + QE GN Sbjct: 549 VSVYSVXQEPGN 560
>tr|A9THZ2|A9THZ2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93001 PE=4 SV=1 Length = 842
Score = 264 bits (675), Expect = 2e-69 Identities = 131/233 (56%), Positives = 151/233 (64%), Gaps = 42/233 (18%) Frame = +1
Query: 1 RFKNKWFGGRKDV-SYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPP 177 RF+ KWF R S ++VE +FW +VER PVEVLYGSD+ + +YGSGFPR DRVP Sbjct: 319 RFRRKWFASRSSPPSNSDVEADFWRIVERGTEPVEVLYGSDIDTGLYGSGFPRASDRVPH 378
Query: 178 SVDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQC 357 + W YV PWNLNNFPKL+ S+L+ VQ++IPGV VPW+YMGM+FSSFCWHYED C Sbjct: 379 GFEAEAWEGYVKDPWNLNNFPKLEDSMLRMVQDDIPGVIVPWLYMGMMFSSFCWHYEDHC 438
Query: 358 FYSINYLH------------------------W-----------------GEPKCWYGVP 414 FYSINYLH W G PK WY VP Sbjct: 439 FYSINYLHRFMGVPMSMVVSEAGIGGGDRAGEWRCAGTEERGRGRRGWHGGAPKTWYSVP 498
Query: 415 GSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLRENDVPVCTTIQERG 573 GSA FEQVM K+FPDLFEAQPDLLFQLVTMLNP VLR+++VPVCTT QE G Sbjct: 499 GSAASEFEQVMQKSFPDLFEAQPDLLFQLVTMLNPIVLRDSNVPVCTTTQEAG 551
>tr|A9TI08|A9TI08_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93018 PE=4 SV=1 Length = 1130
Score = 259 bits (663), Expect = 6e-68 Identities = 132/253 (52%), Positives = 152/253 (60%), Gaps = 61/253 (24%) Frame = +1
Query: 1 RFKNKWFGGRKDV-SYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPP 177 RF+ KWF R S ++VE +FW +VER PVEVLYGSD+ + +YGSGFPR DRVP Sbjct: 340 RFRRKWFASRSSPPSNSDVEADFWRIVERGTDPVEVLYGSDIDTGLYGSGFPRASDRVPH 399
Query: 178 SVDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQC 357 VW EYV PWNLNNFPKL+ S+L+ VQ++IPGV VPW+YMGM+FSSFCWHYED C Sbjct: 400 GFKAEVWEEYVKDPWNLNNFPKLEDSMLRMVQDDIPGVIVPWLYMGMMFSSFCWHYEDHC 459
Query: 358 FYSINYLH-----------------------------------WGEPKC----------- 399 FYSINYLH W P C Sbjct: 460 FYSINYLHRGVGSGWFGSCIEAWVRGEVHEGADEHGGLRGWDGWRRPGCGMALCVERGEG 519
Query: 400 --------------WYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREN 537 WY VPGSA FEQVM K+FPDLFEAQPDLLFQLVTMLNP VLR++ Sbjct: 520 ACFLRSWHGGAPKTWYSVPGSAATEFEQVMQKSFPDLFEAQPDLLFQLVTMLNPTVLRDS 579
Query: 538 DVPVCTTIQERGN 576 +VPVCTT QE G+ Sbjct: 580 NVPVCTTTQEAGH 592
>tr|Q94BQ7|Q94BQ7_ARATH Putative RB-binding protein OS=Arabidopsis thaliana GN=At1g63490 PE=2 SV=1 Length = 1116
Score = 251 bits (642), Expect = 2e-65 Identities = 110/157 (70%), Positives = 131/157 (83%) Frame = +1
Query: 106 LYGSDLASEVYGSGFPRPLDRVPPSVDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIP 285 +YG+DL + VYGSGFPR D+ P SV+ +W+EY SPWNLNN PKL GS+L+ ++ NI Sbjct: 1 MYGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNIN 60
Query: 286 GVTVPWVYMGMLFSSFCWHYEDQCFYSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPD 465 GVTVPW+Y+GMLFSSFCWH+ED CFYS+NYLHWGE KCWYG+PGSA AFE+VM KT PD Sbjct: 61 GVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPD 120
Query: 466 LFEAQPDLLFQLVTMLNPKVLRENDVPVCTTIQERGN 576 LF+AQPDLLFQLVTML+P VL+EN VPV T +QE GN Sbjct: 121 LFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGN 157
>tr|B8B2Y1|B8B2Y1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24556 PE=4 SV=1 Length = 1699
Score = 200 bits (508), Expect = 5e-50 Identities = 102/192 (53%), Positives = 131/192 (68%) Frame = +1
Query: 1 RFKNKWFGGRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPPS 180 R + +WFG K+ S +VE++FW +VE G +EV+YGSDL + +YGSGFPR D VP S Sbjct: 331 RVRKRWFG-HKNPSRVQVEKQFWEIVEGKVGELEVMYGSDLDTSIYGSGFPRLCDPVPSS 389
Query: 181 VDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQCF 360 VD +W++Y +SPWNLNNFP L GSVL+ V++NI G + + S F H Sbjct: 390 VDPVMWHKYCSSPWNLNNFPNLPGSVLQTVRDNIAGHLMSNHRAAVSASLFHLH-----S 444
Query: 361 YSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREND 540 YS +H GEPKCWYGVPG+ +AFE+VM PDLF+AQPDLLF LVTML+P +L+ N Sbjct: 445 YS---MHVGEPKCWYGVPGAEANAFEKVMRNALPDLFDAQPDLLFHLVTMLSPSILQANG 501
Query: 541 VPVCTTIQERGN 576 VPV + IQE GN Sbjct: 502 VPVYSVIQEPGN 513
>tr|A7QC14|A7QC14_VITVI Chromosome chr10 scaffold_76, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035196001 PE=4 SV=1 Length = 717
Score = 198 bits (504), Expect = 2e-49 Identities = 97/193 (50%), Positives = 126/193 (65%), Gaps = 3/193 (1%) Frame = +1
Query: 4 FKNKWFG---GRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVP 174 FK +FG + +++ ++E E+W +VE+ VEV YG+DL +E + SGFP+ Sbjct: 45 FKEFYFGIKDAKDNLNSDDIEGEYWRIVEKPTDEVEVYYGADLETEAFVSGFPK----AS 100
Query: 175 PSVDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQ 354 + ++ ++YV S WNLNNFP+L GSVL Q +I GV VPW+Y+GM FSSFCWH ED Sbjct: 101 SLISENDSDQYVASGWNLNNFPRLPGSVLCFEQNDISGVLVPWLYVGMCFSSFCWHVEDH 160
Query: 355 CFYSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLRE 534 YS+NYLHWG+ K WYGVPGS A E M K PDLFE QP LL +LVT L+P VL+ Sbjct: 161 HLYSLNYLHWGDSKVWYGVPGSHASALENAMRKHLPDLFEEQPYLLNELVTQLSPSVLKS 220
Query: 535 NDVPVCTTIQERG 573 +VPV IQ G Sbjct: 221 ENVPVYRAIQNSG 233
>tr|A3BFN7|A3BFN7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021859 PE=4 SV=1 Length = 1698
Score = 197 bits (502), Expect = 3e-49 Identities = 101/191 (52%), Positives = 130/191 (68%) Frame = +1
Query: 1 RFKNKWFGGRKDVSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFPRPLDRVPPS 180 R + +WFG K+ S +VE++FW +VE G +EV+YGSDL + +YGSGFPR D VP S Sbjct: 315 RVRKRWFG-HKNPSRVQVEKQFWEIVEGKVGELEVMYGSDLDTSIYGSGFPRLCDPVPSS 373
Query: 181 VDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYEDQCF 360 VD +W++Y +SPWNLNNFP L GSVL+ V++NI G + + S F H Sbjct: 374 VDPVMWHKYCSSPWNLNNFPNLPGSVLQTVRDNIAGHLMSNHRAAVSASLFHLH-----S 428
Query: 361 YSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLREND 540 YS +H GEPKCWYGVPG+ +AFE+VM PDLF+AQPDLLF LVTML+P +L+ N Sbjct: 429 YS---MHVGEPKCWYGVPGAEANAFEKVMRNALPDLFDAQPDLLFHLVTMLSPSILQANG 485
Query: 541 VPVCTTIQERG 573 VPV + IQE G Sbjct: 486 VPVYSVIQEPG 496
>tr|B7QJG8|B7QJG8_IXOSC Jumonji/ARID domain-containing protein, putative OS=Ixodes scapularis GN=IscW_ISCW013765 PE=4 SV=1 Length = 1356
Score = 197 bits (501), Expect = 3e-49 Identities = 96/194 (49%), Positives = 123/194 (63%), Gaps = 3/194 (1%) Frame = +1
Query: 1 RFKNKWFGGRKD-VSYAEVEEEFWSVVERCKGPVEVLYGSDLASEVYGSGFP--RPLDRV 171 RFK+ +F +S VE+EFW +V V V YG+DL S +GSGFP D + Sbjct: 134 RFKSNYFNMPVHMISTETVEKEFWRIVSAVDEDVTVEYGADLHSMEHGSGFPTKNSADLM 193
Query: 172 PPSVDKHVWNEYVNSPWNLNNFPKLDGSVLKHVQENIPGVTVPWVYMGMLFSSFCWHYED 351 P D Y+ S WNLNN P +DGSVL+H+ +I G+ +PW+Y+GM F++FCWH ED Sbjct: 194 PGDED------YMKSGWNLNNLPVVDGSVLRHINADISGMKIPWMYVGMCFATFCWHNED 247
Query: 352 QCFYSINYLHWGEPKCWYGVPGSAVDAFEQVMHKTFPDLFEAQPDLLFQLVTMLNPKVLR 531 YSINYLHWGEPK WYGVPG + FE M P+LF AQPDLL QLVT++NP +L+ Sbjct: 248 HWSYSINYLHWGEPKTWYGVPGGKAEVFEAAMRSAAPELFHAQPDLLHQLVTIMNPNILQ 307
Query: 532 ENDVPVCTTIQERG 573 + VP+ T Q G Sbjct: 308 ASGVPIYRTDQSAG 321
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