BP915543 |
Clone id |
YMU001_000072_H02 |
Library |
YMU01 |
Length |
536 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_H02. |
Accession |
BP915543 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1074Contig1 |
Sequence |
GTCCCACGCACAAGAGACCGACCTGATTCTTCAAAAACCTCACTGGCTATTGGCAGCTCT AAACCATGCGCTCCACGAGCTCCAATGACAAAAATCCGGCCCGTACCATCTTCCAGGTAC CAAGGGACCTCCTTGCTCATGGCAAGCATCAGTGCAGAATCCTGAATCCATGAGCCTGAT TCGTAGTGTTTCAAAAAATGTTGTTCTGCAATCTCTTCAAGAATGACTCCTCGCAGACTG CTATGCTCACAGCTTATTGGAGCATCAGAACCCACTCGTCCGGCAACAGTCACCACCAAT GGAAGTGCTTTGCAAGCTGATTCCGATAAAGCAGCCAAGTCCTTGAGCTGATTGACTCGC TTGACAGATTTCAAATCAGCGGCGTCCCGACCAGTGTTGCGCGATAAGCAGTACAGCGCA GCTCCGCTGAGGCAGAAGGTAAGGCCACCCCAAGACAGTATCTTTTACGTATTCCACTAT TTGAGGTCATGTACCTGTTCATCTTCATACTCTAGCCGAACCCATGCACGCATGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q03059 |
Definition |
sp|Q03059|CLAT_MOUSE Choline O-acetyltransferase OS=Mus musculus |
Align length |
85 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RJ34 |
Definition |
tr|A9RJ34|A9RJ34_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
153 |
Score (bit) |
259.0 |
E-value |
6.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915543|Adiantum capillus-veneris mRNA, clone: YMU001_000072_H02. (536 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RJ34|A9RJ34_PHYPA Predicted protein OS=Physcomitrella paten... 259 6e-68 tr|A9T6Y2|A9T6Y2_PHYPA Predicted protein OS=Physcomitrella paten... 233 6e-60 tr|A7PU46|A7PU46_VITVI Chromosome chr7 scaffold_31, whole genome... 228 2e-58 tr|A5BV54|A5BV54_VITVI Putative uncharacterized protein OS=Vitis... 228 2e-58 tr|Q9CAK2|Q9CAK2_ARATH Putative uncharacterized protein T12P18.9... 216 8e-55 tr|Q8L7N4|Q8L7N4_ARATH Putative RING zinc finger protein (Putati... 216 8e-55 tr|Q0D437|Q0D437_ORYSJ Os07g0647800 protein OS=Oryza sativa subs... 216 8e-55 tr|B8B5A5|B8B5A5_ORYSI Putative uncharacterized protein OS=Oryza... 216 8e-55 tr|B7ZX96|B7ZX96_MAIZE Putative uncharacterized protein OS=Zea m... 210 4e-53 tr|B4FE21|B4FE21_MAIZE Putative uncharacterized protein OS=Zea m... 210 4e-53 tr|A3BMV1|A3BMV1_ORYSJ Putative uncharacterized protein OS=Oryza... 201 3e-50 tr|Q1RSJ8|Q1RSJ8_MEDTR Zinc finger, RING-type OS=Medicago trunca... 194 3e-48 tr|Q3YIH5|Q3YIH5_ARATH At1g63900 (Fragment) OS=Arabidopsis thali... 184 3e-45 tr|Q3YI74|Q3YI74_ARALY At1g63900-like protein (Fragment) OS=Arab... 184 3e-45 tr|Q3YIH7|Q3YIH7_ARATH At1g63900 (Fragment) OS=Arabidopsis thali... 183 6e-45 tr|Q3YIH8|Q3YIH8_ARATH At1g63900 (Fragment) OS=Arabidopsis thali... 182 7e-45 tr|Q9LQ59|Q9LQ59_ARATH T30E16.12 OS=Arabidopsis thaliana PE=4 SV=1 144 2e-33 tr|Q94HV7|Q94HV7_ARATH Putative uncharacterized protein T4M14.12... 144 2e-33 tr|Q1RSJ7|Q1RSJ7_MEDTR Putative uncharacterized protein OS=Medic... 103 6e-21 tr|Q1RSJ4|Q1RSJ4_MEDTR T30E16.12, related OS=Medicago truncatula... 88 3e-16 tr|Q1RSJ6|Q1RSJ6_MEDTR T30E16.12, related OS=Medicago truncatula... 87 5e-16 tr|A9PFT8|A9PFT8_POPTR Putative uncharacterized protein OS=Popul... 81 3e-14 tr|A4Q527|A4Q527_MEDTR T30E16.12, related OS=Medicago truncatula... 60 7e-08 tr|Q9SLU0|Q9SLU0_ARATH ZCF61 protein OS=Arabidopsis thaliana GN=... 52 1e-05 tr|A4Q528|A4Q528_MEDTR Putative uncharacterized protein OS=Medic... 44 0.004 tr|Q10L44|Q10L44_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A8IEY0|A8IEY0_CHLRE Predicted protein OS=Chlamydomonas reinha... 40 0.059 tr|Q3ME72|Q3ME72_ANAVT Aminotransferase OS=Anabaena variabilis (... 40 0.100 tr|Q8YTB2|Q8YTB2_ANASP Valine-pyruvate aminotransferase OS=Anaba... 39 0.13 tr|B1XMR0|B1XMR0_SYNP2 Valine-pyruvate aminotransferase OS=Synec... 39 0.13
>tr|A9RJ34|A9RJ34_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175369 PE=4 SV=1 Length = 352
Score = 259 bits (662), Expect = 6e-68 Identities = 123/153 (80%), Positives = 142/153 (92%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 +LSWGG+T CLSGAALYCLSRNTGRDA +L+S++RVNQLKDLA L ESACK +PLVVTVA Sbjct: 1 MLSWGGITLCLSGAALYCLSRNTGRDALNLRSIERVNQLKDLAILLESACKVVPLVVTVA 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGS+ PI+CEHSSLRGVILEE AEQHFLKH ++GSWIQDSALML++SKEVPWYLEDGT Sbjct: 61 GRVGSETPIACEHSSLRGVILEETAEQHFLKHNDTGSWIQDSALMLSISKEVPWYLEDGT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR++++GAR A G+EL +ASEVFEESGRSLVRG Sbjct: 121 GRVYIVGARNAAGMELTVASEVFEESGRSLVRG 153
>tr|A9T6Y2|A9T6Y2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219493 PE=4 SV=1 Length = 352
Score = 233 bits (593), Expect = 6e-60 Identities = 114/153 (74%), Positives = 132/153 (86%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 +LSWGG+T C SGAALYCLSRNTGRDA L SV+RVNQL+DLA L ESAC +P VVTVA Sbjct: 1 MLSWGGITLCFSGAALYCLSRNTGRDALHLMSVERVNQLEDLAKLLESACTVVPWVVTVA 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVG++API+ EHSSLRGVILE+ AEQHFLKH ++GSWIQ SALML++SKEVPWYLEDGT Sbjct: 61 GRVGAEAPIASEHSSLRGVILEKSAEQHFLKHNDTGSWIQHSALMLSISKEVPWYLEDGT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 R+F+IGAR A G++L +ASE FEE G SLVRG Sbjct: 121 SRVFIIGARNAAGMDLTVASESFEEYGGSLVRG 153
>tr|A7PU46|A7PU46_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023653001 PE=4 SV=1 Length = 343
Score = 228 bits (580), Expect = 2e-58 Identities = 110/153 (71%), Positives = 129/153 (84%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG++ CLS AALY L R++GRDA LKSV RV QLKDL L ++ACK LPLVVTV+ Sbjct: 1 MIPWGGISCCLSAAALYLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVS 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD PI CE+S LRGVI+EE AEQHFLKH ++GSWIQDSALML+MSKEVPWYL+D T Sbjct: 61 GRVGSDTPIKCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDDT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR +++GARGA GL L + SEVFEESGRSLVRG Sbjct: 121 GRAYIVGARGATGLVLTVGSEVFEESGRSLVRG 153
>tr|A5BV54|A5BV54_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014294 PE=4 SV=1 Length = 202
Score = 228 bits (580), Expect = 2e-58 Identities = 110/153 (71%), Positives = 129/153 (84%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG++ CLS AALY L R++GRDA LKSV RV QLKDL L ++ACK LPLVVTV+ Sbjct: 1 MIPWGGISCCLSAAALYLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVS 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD PI CE+S LRGVI+EE AEQHFLKH ++GSWIQDSALML+MSKEVPWYL+D T Sbjct: 61 GRVGSDTPIKCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDDT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR +++GARGA GL L + SEVFEESGRSLVRG Sbjct: 121 GRAYIVGARGATGLVLTVGSEVFEESGRSLVRG 153
>tr|Q9CAK2|Q9CAK2_ARATH Putative uncharacterized protein T12P18.9 OS=Arabidopsis thaliana GN=T12P18.9 PE=4 SV=1 Length = 200
Score = 216 bits (549), Expect = 8e-55 Identities = 104/153 (67%), Positives = 125/153 (81%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+T CLS AALY L R++GRDA L++V RVNQLK+LA L E K LP +V V+ Sbjct: 1 MIPWGGVTCCLSAAALYLLGRSSGRDAEVLETVTRVNQLKELAQLLELDSKILPFIVAVS 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGS+ PI CEHS +RGVI+EE AEQHFLKH E+GSW+QDSALML+MSKEVPW+L+DGT Sbjct: 61 GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 R+ V+GARGA G L + SEVFEESGRSLVRG Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRG 153
>tr|Q8L7N4|Q8L7N4_ARATH Putative RING zinc finger protein (Putative uncharacterized protein At1g63890) OS=Arabidopsis thaliana GN=At1g63890 PE=2 SV=1 Length = 343
Score = 216 bits (549), Expect = 8e-55 Identities = 104/153 (67%), Positives = 125/153 (81%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+T CLS AALY L R++GRDA L++V RVNQLK+LA L E K LP +V V+ Sbjct: 1 MIPWGGVTCCLSAAALYLLGRSSGRDAEVLETVTRVNQLKELAQLLELDSKILPFIVAVS 60
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGS+ PI CEHS +RGVI+EE AEQHFLKH E+GSW+QDSALML+MSKEVPW+L+DGT Sbjct: 61 GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 R+ V+GARGA G L + SEVFEESGRSLVRG Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRG 153
>tr|Q0D437|Q0D437_ORYSJ Os07g0647800 protein OS=Oryza sativa subsp. japonica GN=Os07g0647800 PE=4 SV=1 Length = 287
Score = 216 bits (549), Expect = 8e-55 Identities = 103/153 (67%), Positives = 127/153 (83%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+ CLS AALY L R++GRDA L+SV R KDLAA+ ++A K LPLVV V+ Sbjct: 2 LIPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLAAILDTASKVLPLVVAVS 61
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD P+ C+ S +RGVI+EE AEQHFLKH ++GSWIQDSA+ML++SKEVPWYL+DGT Sbjct: 62 GRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQDSAVMLSVSKEVPWYLDDGT 121
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR+FV+GARGA GL L +ASEVFEESGR+LVRG Sbjct: 122 GRVFVVGARGAAGLVLTVASEVFEESGRTLVRG 154
>tr|B8B5A5|B8B5A5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27112 PE=4 SV=1 Length = 343
Score = 216 bits (549), Expect = 8e-55 Identities = 103/153 (67%), Positives = 127/153 (83%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+ CLS AALY L R++GRDA L+SV R KDLAA+ ++A K LPLVV V+ Sbjct: 2 LIPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLAAILDTASKVLPLVVAVS 61
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD P+ C+ S +RGVI+EE AEQHFLKH ++GSWIQDSA+ML++SKEVPWYL+DGT Sbjct: 62 GRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQDSAVMLSVSKEVPWYLDDGT 121
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR+FV+GARGA GL L +ASEVFEESGR+LVRG Sbjct: 122 GRVFVVGARGAAGLVLTVASEVFEESGRTLVRG 154
>tr|B7ZX96|B7ZX96_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 194
Score = 210 bits (534), Expect = 4e-53 Identities = 99/153 (64%), Positives = 126/153 (82%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+ CLS AALY L R++G DA L+SV R +KDLAA+ ++A K LPLVV ++ Sbjct: 2 MIPWGGVGCCLSAAALYLLGRSSGSDAEVLRSVARAGSMKDLAAILDTASKVLPLVVAIS 61
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD P+ C+ S +RGVI+EE AEQHFLKH ++GSWIQDSA+ML++SKEVPWYL+DGT Sbjct: 62 GRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQDSAVMLSVSKEVPWYLDDGT 121
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR++V+GAR A GL L +ASEVFEESGR+LVRG Sbjct: 122 GRVYVVGARSAAGLILTVASEVFEESGRTLVRG 154
>tr|B4FE21|B4FE21_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 331
Score = 210 bits (534), Expect = 4e-53 Identities = 99/153 (64%), Positives = 126/153 (82%) Frame = -1
Query: 461 ILSWGGLTFCLSGAALYCLSRNTGRDAADLKSVKRVNQLKDLAALSESACKALPLVVTVA 282 ++ WGG+ CLS AALY L R++G DA L+SV R +KDLAA+ ++A K LPLVV ++ Sbjct: 2 MIPWGGVGCCLSAAALYLLGRSSGSDAEVLRSVARAGSMKDLAAILDTASKVLPLVVAIS 61
Query: 281 GRVGSDAPISCEHSSLRGVILEEIAEQHFLKHYESGSWIQDSALMLAMSKEVPWYLEDGT 102 GRVGSD P+ C+ S +RGVI+EE AEQHFLKH ++GSWIQDSA+ML++SKEVPWYL+DGT Sbjct: 62 GRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQDSAVMLSVSKEVPWYLDDGT 121
Query: 101 GRIFVIGARGAHGLELPIASEVFEESGRSLVRG 3 GR++V+GAR A GL L +ASEVFEESGR+LVRG Sbjct: 122 GRVYVVGARSAAGLILTVASEVFEESGRTLVRG 154
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