BP915546
Clone id YMU001_000072_H05
Library
Length 310
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATATTGAACCTGAATCTGTTCGTCCCATGGGAAATTATGCTGTATCTATTACTTGGCCTG
ATGGCTTCAATCAGGTTGCACCATTTGAGCAGTTGCAGAGTATAGAGAGGCTTGTTGATG
TGCCGGAGCCACTGGTTCCTATGATCAGTGGGAGGAGTATGGGGCCTCCAAGTCTGCAAC
TCATAAGTGACTATAAGCCGGCAGGGACGACTTTTTCTAATGCGGCATCCATCTTGCAGC
ATGCCAAAGCTCTTAAAGATAGAAGTGCTAGCAAGAATGCCGTCATGTAGTAGCTCTACA
GTTTTTCCCC
■■Homology search results ■■ -
sp_hit_id A4IJN4
Definition sp|A4IJN4|GLMM_GEOTN Phosphoglucosamine mutase OS=Geobacillus thermodenitrificans (strain NG80-2)
Align length 86
Score (bit) 35.4
E-value 0.089
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915546|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_H05.
(310 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4IJN4|GLMM_GEOTN Phosphoglucosamine mutase OS=Geobacillus th... 35 0.089
sp|Q7V844|PROB_PROMM Glutamate 5-kinase OS=Prochlorococcus marin... 33 0.44
sp|A2SEX8|PANB2_METPP 3-methyl-2-oxobutanoate hydroxymethyltrans... 32 1.3
sp|Q02092|GHR_CHICK Growth hormone receptor OS=Gallus gallus GN=... 31 2.2
sp|P73754|Y863_SYNY3 Uncharacterized protein slr0863 OS=Synechoc... 30 4.9
sp|Q12609|STCF_EMENI Probable sterigmatocystin biosynthesis P450... 30 4.9
sp|A1S3M7|PANB_SHEAM 3-methyl-2-oxobutanoate hydroxymethyltransf... 30 4.9
sp|Q90375|GHR_COLLI Growth hormone receptor OS=Columba livia GN=... 29 6.4
sp|Q9JI97|GHR_CAVPO Growth hormone receptor OS=Cavia porcellus G... 29 8.3
sp|Q8R5K4|NOL6_MOUSE Nucleolar protein 6 OS=Mus musculus GN=Nol6... 29 8.4

>sp|A4IJN4|GLMM_GEOTN Phosphoglucosamine mutase OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=glmM PE=3 SV=1
Length = 448

Score = 35.4 bits (80), Expect = 0.089
Identities = 27/86 (31%), Positives = 37/86 (43%)
Frame = +3

Query: 15 SVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPMISGRSMGPPSLQLISDY 194
S P+ + + PDGF EQ Q IE L+D PE ++P G S+G ++DY
Sbjct: 100 SHNPVQDNGIKFFGPDGFK--LSDEQEQEIETLIDSPEDMLPRPIGSSLGQ-----VNDY 152

Query: 195 KPAGTTFSNAASILQHAKALKDRSAS 272
F LQ+ K D S
Sbjct: 153 ------FEGGQKYLQYLKQTIDEDFS 172


>sp|Q7V844|PROB_PROMM Glutamate 5-kinase OS=Prochlorococcus marinus
(strain MIT 9313) GN=proB PE=3 SV=1
Length = 361

Score = 33.1 bits (74), Expect = 0.44
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3

Query: 170 WRPHTPPTDHRNQWLRHINKPLYTLQL 90
+ PH P +R WL H KPL TLQL
Sbjct: 253 FHPHPQPLGNRKSWLAHALKPLGTLQL 279


>sp|A2SEX8|PANB2_METPP 3-methyl-2-oxobutanoate
hydroxymethyltransferase 2 OS=Methylibium petroleiphilum
(strain PM1) GN=panB2 PE=3 SV=2
Length = 279

Score = 31.6 bits (70), Expect = 1.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3

Query: 135 VPMISGRSMGPPSLQLISDYKPAGTTFSNAASILQHAKALKDRSAS 272
VP+ + + P S+ + Y+ G + AA++ +HAKAL D A+
Sbjct: 145 VPVCAHLGLTPQSVHALGGYRIQGKDEAGAATLRRHAKALADAGAA 190


>sp|Q02092|GHR_CHICK Growth hormone receptor OS=Gallus gallus GN=GHR
PE=1 SV=1
Length = 608

Score = 30.8 bits (68), Expect = 2.2
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1

Query: 133 WFL*SVGGVWGLQVCNS*VTISRQGRLFLMRHPSCSMPKLLKIE 264
WFL V GV GL V + +S+Q RL ++ P +PK+ I+
Sbjct: 240 WFLVVVFGVCGLAVTAILILLSKQPRLKMLIFPPVPVPKIKGID 283


>sp|P73754|Y863_SYNY3 Uncharacterized protein slr0863
OS=Synechocystis sp. (strain PCC 6803) GN=slr0863 PE=3
SV=1
Length = 463

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3

Query: 84 FEQLQSIERLVDVPEPLVPMISGRSMGPPSLQLISDYKPAG 206
F L + L + P+ L M GR GPP LQ+ P G
Sbjct: 247 FGHLSEADMLYENPDFLEVMSLGRRFGPPELQIFDGAAPPG 287


>sp|Q12609|STCF_EMENI Probable sterigmatocystin biosynthesis P450
monooxygenase stcF OS=Emericella nidulans GN=stcF PE=3
SV=2
Length = 478

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3

Query: 90 QLQSIERLVDVP---EPLVPMISGRSMGPPSLQLISDYKPAGTT 212
Q+Q ++ ++D P VPM S R + PP +L + P GT+
Sbjct: 331 QIQGLQAVLDESLRLYPAVPMQSNRIVPPPGARLAGSWVPGGTS 374


>sp|A1S3M7|PANB_SHEAM 3-methyl-2-oxobutanoate
hydroxymethyltransferase OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=panB PE=3 SV=2
Length = 264

Score = 29.6 bits (65), Expect = 4.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3

Query: 93 LQSIERLVDVPEPLVPMISGRSMGPPSLQLISDYKPAGTTFSNAASILQHAKALKDRSA 269
L+S+++L E VP+ + + P S+ + +K G NA IL AKAL+ A
Sbjct: 120 LESVKKLT---ERGVPVCAHIGLTPQSVHVFGGFKVQGRDADNAQRILNEAKALEAAGA 175


>sp|Q90375|GHR_COLLI Growth hormone receptor OS=Columba livia GN=GHR
PE=2 SV=1
Length = 611

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1

Query: 133 WFL*SVGGVWGLQVCNS*VTISRQGRLFLMRHPSCSMPKLLKIE 264
WFL + G GL V + +S+Q RL ++ P +PK+ I+
Sbjct: 243 WFLVVIFGACGLAVTVILILLSKQSRLKMLIFPPVPVPKIKGID 286


>sp|Q9JI97|GHR_CAVPO Growth hormone receptor OS=Cavia porcellus
GN=GHR PE=2 SV=1
Length = 628

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1

Query: 133 WFL*SVGGVWGLQVCNS*VTISRQGRLFLMRHPSCSMPKLLKIE 264
WFL + G++GL V V S+Q R+ ++ P +PK+ ++
Sbjct: 267 WFLIMIFGIFGLTVMLLVVMFSKQQRIKMLILPPVPVPKIKGVD 310


>sp|Q8R5K4|NOL6_MOUSE Nucleolar protein 6 OS=Mus musculus GN=Nol6
PE=2 SV=2
Length = 1152

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 8/36 (22%)
Frame = -3

Query: 209 RPCRLIVT--------YELQTWRPHTPPTDHRNQWL 126
RPCRL+ T Y Q+ + PPT H N W+
Sbjct: 272 RPCRLLPTKNNVRSAWYRGQSCPDYEPPTPHYNTWI 307


tr_hit_id A7PET4
Definition tr|A7PET4|A7PET4_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 42
Score (bit) 80.9
E-value 3.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915546|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_H05.
(310 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PET4|A7PET4_VITVI Chromosome chr11 scaffold_13, whole genom... 81 3e-14
tr|A5BUC0|A5BUC0_VITVI Putative uncharacterized protein OS=Vitis... 81 3e-14
tr|Q9LK00|Q9LK00_ARATH Similarity to nucleotide-binding protein ... 80 4e-14
tr|Q8LD16|Q8LD16_ARATH Mrp protein, putative (Putative PSI stabi... 80 4e-14
tr|Q6STH5|Q6STH5_ARATH [4Fe-4S] cluster assembly factor (Putativ... 80 4e-14
tr|A9U187|A9U187_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13
tr|Q0JJS8|Q0JJS8_ORYSJ Os01g0719700 protein OS=Oryza sativa subs... 79 1e-13
tr|A2ZXA7|A2ZXA7_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|A2WUI9|A2WUI9_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|Q00TE1|Q00TE1_OSTTA Predicted ATPase, nucleotide-binding (ISS... 47 4e-04
tr|A4S966|A4S966_OSTLU Predicted protein OS=Ostreococcus lucimar... 47 6e-04
tr|A6DSR2|A6DSR2_9BACT Putative uncharacterized protein OS=Lenti... 41 0.026
tr|B8CCD7|B8CCD7_THAPS Predicted protein (Fragment) OS=Thalassio... 39 0.17
tr|B6A9Y9|B6A9Y9_9CRYT Putative uncharacterized protein OS=Crypt... 39 0.17
tr|B5Y591|B5Y591_PHATR Predicted protein (Fragment) OS=Phaeodact... 38 0.29
tr|Q1BJ50|Q1BJ50_BURCA Twin-arginine translocation pathway signa... 36 1.1
tr|A0KE85|A0KE85_BURCH Aerobic-type carbon monoxide dehydrogenas... 36 1.1
tr|B4BRK4|B4BRK4_9BACI Phosphoglucosamine mutase OS=Geobacillus ... 35 1.4
tr|B4EQ85|B4EQ85_BURCJ Putative oxidoreductase OS=Burkholderia c... 35 1.9
tr|A0CZI6|A0CZI6_PARTE Chromosome undetermined scaffold_32, whol... 35 1.9
tr|B1KB75|B1KB75_BURCC Aerobic-type carbon monoxide dehydrogenas... 35 2.5
tr|A0BV47|A0BV47_PARTE Chromosome undetermined scaffold_13, whol... 35 2.5
tr|Q04EC9|Q04EC9_OENOB Predicted amidophosphoribosyltransferase ... 33 5.5
tr|B1FPB3|B1FPB3_9BURK Aerobic-type carbon monoxide dehydrogenas... 33 5.5
tr|A2CAG8|A2CAG8_PROM3 Putative glutamate 5-kinase OS=Prochloroc... 33 7.2
tr|A7RU13|A7RU13_NEMVE Predicted protein OS=Nematostella vectens... 33 7.2
tr|B0WD11|B0WD11_CULQU Ubiquitin-protein ligase OS=Culex quinque... 33 9.4

>tr|A7PET4|A7PET4_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016780001
PE=4 SV=1
Length = 331

Score = 80.9 bits (198), Expect = 3e-14
Identities = 34/42 (80%), Positives = 41/42 (97%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPE 128
IEPE +RPMGNYAVSITWPDGF+Q+AP++QLQ+IERLVDVP+
Sbjct: 195 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTIERLVDVPQ 236


>tr|A5BUC0|A5BUC0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043786 PE=4 SV=1
Length = 1372

Score = 80.9 bits (198), Expect = 3e-14
Identities = 34/42 (80%), Positives = 41/42 (97%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPE 128
IEPE +RPMGNYAVSITWPDGF+Q+AP++QLQ+IERLVDVP+
Sbjct: 1308 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTIERLVDVPQ 1349


>tr|Q9LK00|Q9LK00_ARATH Similarity to nucleotide-binding protein
OS=Arabidopsis thaliana PE=4 SV=1
Length = 550

Score = 80.5 bits (197), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPM 143
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ IERLVDVP PL P+
Sbjct: 503 IEPEDIRPMGNYAVSITWPDGFSQIAPYDQLEEIERLVDVP-PLSPV 548


>tr|Q8LD16|Q8LD16_ARATH Mrp protein, putative (Putative PSI
stabilising protein) OS=Arabidopsis thaliana GN=hcf101
PE=2 SV=1
Length = 532

Score = 80.5 bits (197), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPM 143
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ IERLVDVP PL P+
Sbjct: 485 IEPEDIRPMGNYAVSITWPDGFSQIAPYDQLEEIERLVDVP-PLSPV 530


>tr|Q6STH5|Q6STH5_ARATH [4Fe-4S] cluster assembly factor (Putative
mrp protein) OS=Arabidopsis thaliana GN=At3g24430 PE=2
SV=1
Length = 532

Score = 80.5 bits (197), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPM 143
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ IERLVDVP PL P+
Sbjct: 485 IEPEDIRPMGNYAVSITWPDGFSQIAPYDQLEEIERLVDVP-PLSPV 530


>tr|A9U187|A9U187_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_227402 PE=4 SV=1
Length = 584

Score = 79.0 bits (193), Expect = 1e-13
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPMISGRSMGPPSLQL 182
+ PES+RPMGNYA +I WPDGF+Q+AP++QL ++ERLVD+PEP VP+ P +
Sbjct: 507 LAPESIRPMGNYAAAINWPDGFSQIAPYDQLATMERLVDIPEP-VPV-------PENTAA 558

Query: 183 ISDYKPAGTTFSNAASILQHAKALK 257
+ AA+IL HA+ L+
Sbjct: 559 TQSTNEKPVKDAGAAAILNHARRLQ 583


>tr|Q0JJS8|Q0JJS8_ORYSJ Os01g0719700 protein OS=Oryza sativa subsp.
japonica GN=Os01g0719700 PE=4 SV=1
Length = 435

Score = 78.6 bits (192), Expect = 1e-13
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPMIS 149
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ +ERLVDVP +S
Sbjct: 386 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTAAVS 434


>tr|A2ZXA7|A2ZXA7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003179 PE=4 SV=1
Length = 500

Score = 78.6 bits (192), Expect = 1e-13
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPMIS 149
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ +ERLVDVP +S
Sbjct: 451 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTAAVS 499


>tr|A2WUI9|A2WUI9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03540 PE=4 SV=1
Length = 500

Score = 78.6 bits (192), Expect = 1e-13
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERLVDVPEPLVPMIS 149
IEPE +RPMGNYAVSITWPDGF+Q+AP++QL+ +ERLVDVP +S
Sbjct: 451 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTAAVS 499


>tr|Q00TE1|Q00TE1_OSTTA Predicted ATPase, nucleotide-binding (ISS)
OS=Ostreococcus tauri GN=Ot17g01480 PE=4 SV=1
Length = 686

Score = 47.4 bits (111), Expect = 4e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3

Query: 3 IEPESVRPMGNYAVSITWPDGFNQVAPFEQLQSIERL 113
I P + +GNYA+SITWPDG +QVA F L +ERL
Sbjct: 645 IAPVEMSVIGNYAMSITWPDGLSQVAAFSTLAKLERL 681