BP915550 |
Clone id |
YMU001_000072_H10 |
Library |
YMU01 |
Length |
506 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_H10. |
Accession |
BP915550 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1186Contig1 |
Sequence |
CCATCACTTTTCAAGGCATATGCAACCATATCATCAATAAGCCTGTGCTCGTACCATATA CCAGCTTCCTCATACTTTGACTTCCAATCAGCTTCATAGACCTCTTGGAAGATGTCTTTG AACCTTCCATCATACTTCTTCAATATAGTATGTTTCGTGCTCAAGTAAAGAGGCCATTTC TTTTCAAAAGCCATTGCCATAGAAGCCTCAGCAAAACTGCGAATAGACTCATCAGTATTG TACATGCTCAGGGCGACACCACCAGCTCCCTGAAAATCAAATACCTCCATCTCCTCAGCT TCACCTCCTTTTGAAGGAACAAAGACTAGCTTGAGCTTTCCAGGGCATTTGATGACAGTG TCAGTGGCTCTGTATTGATCACCAAAAGCATGCCTCCCGATGCAGATAGGTTTTGTCCAG CCTGGAACTAGCCTCGGAACATTCTTGCAAACAATAGGCTCTTGGAACACAGTGCCATTC AAAATATTTCTGATGGTACCATTTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P50217 |
Definition |
sp|P50217|IDHC_SOLTU Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum |
Align length |
168 |
Score (bit) |
310.0 |
E-value |
3.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915550|Adiantum capillus-veneris mRNA, clone: YMU001_000072_H10. (506 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P50217|IDHC_SOLTU Isocitrate dehydrogenase [NADP] OS=Solanum ... 310 3e-84 sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chloroplas... 307 2e-83 sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP] OS=Nicotian... 305 1e-82 sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] OS=Glycine ... 300 2e-81 sp|Q75JR3|IDHC_DICDI Isocitrate dehydrogenase [NADP] cytoplasmic... 247 3e-65 sp|O14254|IDHP_SCHPO Probable isocitrate dehydrogenase [NADP], m... 245 7e-65 sp|P41562|IDHC_RAT Isocitrate dehydrogenase [NADP] cytoplasmic O... 238 1e-62 sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitochondr... 236 3e-62 sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitochondria... 236 5e-62 sp|Q5R9C5|IDHC_PONAB Isocitrate dehydrogenase [NADP] cytoplasmic... 235 8e-62 sp|Q9Z2K9|IDHC_MICME Isocitrate dehydrogenase [NADP] cytoplasmic... 235 8e-62 sp|O75874|IDHC_HUMAN Isocitrate dehydrogenase [NADP] cytoplasmic... 235 8e-62 sp|P56574|IDHP_RAT Isocitrate dehydrogenase [NADP], mitochondria... 235 1e-61 sp|Q9XSG3|IDHC_BOVIN Isocitrate dehydrogenase [NADP] cytoplasmic... 235 1e-61 sp|Q9Z2K8|IDHC_MICOH Isocitrate dehydrogenase [NADP] cytoplasmic... 234 2e-61 sp|Q6XUZ5|IDHC_SHEEP Isocitrate dehydrogenase [NADP] cytoplasmic... 234 2e-61 sp|Q75JR2|IDHP_DICDI Isocitrate dehydrogenase [NADP], mitochondr... 233 3e-61 sp|Q04467|IDHP_BOVIN Isocitrate dehydrogenase [NADP], mitochondr... 233 5e-61 sp|O13285|IDH1_CANTR Isocitrate dehydrogenase [NADP], mitochondr... 233 5e-61 sp|Q4R502|IDHP_MACFA Isocitrate dehydrogenase [NADP], mitochondr... 232 7e-61 sp|P48735|IDHP_HUMAN Isocitrate dehydrogenase [NADP], mitochondr... 232 7e-61 sp|P79089|IDHP_ASPNG Isocitrate dehydrogenase [NADP], mitochondr... 232 7e-61 sp|O88844|IDHC_MOUSE Isocitrate dehydrogenase [NADP] cytoplasmic... 231 1e-60 sp|O13294|IDH2_CANTR Isocitrate dehydrogenase [NADP] peroxisomal... 227 3e-59 sp|P21954|IDHP_YEAST Isocitrate dehydrogenase [NADP], mitochondr... 223 3e-58 sp|P41939|IDHC_YEAST Isocitrate dehydrogenase [NADP] cytoplasmic... 218 2e-56 sp|P50215|IDH_SPHYA Isocitrate dehydrogenase [NADP] OS=Sphingomo... 214 1e-55 sp|P65097|IDH_MYCTU Isocitrate dehydrogenase [NADP] OS=Mycobacte... 211 1e-54 sp|P65098|IDH_MYCBO Isocitrate dehydrogenase [NADP] OS=Mycobacte... 211 1e-54 sp|P53982|IDHH_YEAST Isocitrate dehydrogenase [NADP] OS=Saccharo... 202 6e-52
>sp|P50217|IDHC_SOLTU Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1 Length = 416
Score = 310 bits (793), Expect = 3e-84 Identities = 147/168 (87%), Positives = 157/168 (93%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNILNGTVF+EPI+CKN+PRLVPGWTKPICIGRHAFGDQYRATDTVIK GKLKL Sbjct: 97 PNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKL 156
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VFVP E E EV++F GAGGVALSMYNTDES+RSFAEASM MAF+KKWPLYLSTK+T Sbjct: 157 VFVPEGSDEKTEFEVYNFTGAGGVALSMYNTDESVRSFAEASMNMAFQKKWPLYLSTKNT 216
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQEVYEA+WKSKYEEAGIWYEHRLIDDMVAYALKS+ Sbjct: 217 ILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMVAYALKSE 264
>sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1 Length = 433
Score = 307 bits (787), Expect = 2e-83 Identities = 144/168 (85%), Positives = 157/168 (93%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNILNGTVF+EPI+CKN+PRL+PGWTKPICIGRHAFGDQYRATD+VIK PGKLKL Sbjct: 118 PNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKL 177
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VFVP GE ++EV++F G GGVAL+MYNTDESIRSFAEASMA+A EKKWPLYLSTK+T Sbjct: 178 VFVPEGQGETTDLEVYNFTGEGGVALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKNT 237
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQEVYEA WKSKYE AGIWYEHRLIDDMVAYALKS+ Sbjct: 238 ILKKYDGRFKDIFQEVYEAGWKSKYEAAGIWYEHRLIDDMVAYALKSE 285
>sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1 Length = 415
Score = 305 bits (780), Expect = 1e-82 Identities = 144/168 (85%), Positives = 156/168 (92%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNILNGTVF+EPI+CKN+PRLVPGWTKPICIGRHAFGDQYRATDTVI+ GKLKL Sbjct: 97 PNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIQGAGKLKL 156
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VFVP E E EV++F GAGGVALSMYNTDES+RSFAEASM MA++KKWPLYLSTK+T Sbjct: 157 VFVPEGTDEKTEFEVYNFTGAGGVALSMYNTDESVRSFAEASMNMAYQKKWPLYLSTKNT 216
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQEVYEA+WKSKYEEAGIWYEHRLIDDM AYALKS+ Sbjct: 217 ILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMAAYALKSE 264
>sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2 Length = 413
Score = 300 bits (769), Expect = 2e-81 Identities = 144/168 (85%), Positives = 153/168 (91%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNILNGTVF+EPI+CKN+PRLVPGWTK ICIGRHAFGDQYRATDTVIK GKLKL Sbjct: 98 PNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIKGAGKLKL 157
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VFVP GE E EVF+F G GGV+L+MYNTDESIRSFAEASMA A EKKWPLYLSTK+T Sbjct: 158 VFVPEGQGEETEFEVFNFTGEGGVSLAMYNTDESIRSFAEASMATALEKKWPLYLSTKNT 217
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQEVYEA WKSK+E AGIWYEHRLIDDMVAYALKS+ Sbjct: 218 ILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSE 265
>sp|Q75JR3|IDHC_DICDI Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1 Length = 412
Score = 247 bits (630), Expect = 3e-65 Identities = 115/168 (68%), Positives = 136/168 (80%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRN L GT+F+EPIVCKNVPRLV W K I IGRHAFGDQYRATD V+K GKL+L Sbjct: 96 PNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLEL 155
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 + P+ G ++ +VFDF GGVAL MYNTD SI+ FA A + +KKWPLYLSTK+T Sbjct: 156 TYTPADGSAPQKFQVFDFPSDGGVALGMYNTDASIKEFAYACFNFSLDKKWPLYLSTKNT 215
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILK+YDGRFKDIFQE+YE ++K K++ AGIWYEHRLIDDMVAYA+KS+ Sbjct: 216 ILKRYDGRFKDIFQEIYEREYKVKFDTAGIWYEHRLIDDMVAYAMKSE 263
>sp|O14254|IDHP_SCHPO Probable isocitrate dehydrogenase [NADP], mitochondrial OS=Schizosaccharomyces pombe GN=idp1 PE=2 SV=1 Length = 418
Score = 245 bits (626), Expect = 7e-65 Identities = 116/169 (68%), Positives = 140/169 (82%), Gaps = 1/169 (0%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNILNGTVF+EPI+ KN+P+ +PGWT PICIGRHAFGDQY++TD V PGKL+L Sbjct: 105 PNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQYKSTDLVASGPGKLEL 164
Query: 326 VFVPSKGGEAEEM-EVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKH 150 F P A+E V++F G+G VA+SMYNTD+SIR FA +S MA +KK PLYLSTK+ Sbjct: 165 SFTPKGNPSAKETYNVYEFNGSG-VAMSMYNTDDSIRGFAHSSFQMALQKKMPLYLSTKN 223
Query: 149 TILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 TILKKYDGRFKD FQEVYE+D+K K+EE G+WY+HRLIDDMVA A+KS+ Sbjct: 224 TILKKYDGRFKDTFQEVYESDYKQKFEELGLWYQHRLIDDMVAQAIKSN 272
>sp|P41562|IDHC_RAT Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1 Length = 414
Score = 238 bits (607), Expect = 1e-62 Identities = 110/168 (65%), Positives = 131/168 (77%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNIL GTVF+E I+CKN+PRLV GW KPI IGRHA+GDQYRATD V+ PGK+++ Sbjct: 95 PNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEI 154
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 + P G + V DF+ GGVA+ MYN D+SI FA +S MA K WPLYLSTK+T Sbjct: 155 TYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNT 214
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQE+Y+ +KSK+E IWYEHRLIDDMVA A+KS+ Sbjct: 215 ILKKYDGRFKDIFQEIYDKQYKSKFEAQKIWYEHRLIDDMVAQAMKSE 262
>sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus GN=Idh2 PE=1 SV=3 Length = 452
Score = 236 bits (603), Expect = 3e-62 Identities = 111/167 (66%), Positives = 132/167 (79%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNIL GTVF+EPI+CKN+PRLVPGWTKPI IGRHA GDQY+ATD V+ G KL Sbjct: 135 PNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKL 194
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VF P G A+E EV++F AGGV + MYNTDESI FA + + +KKWPLYLSTK+T Sbjct: 195 VFTPKDGSSAKEWEVYNFP-AGGVGMGMYNTDESISGFAHSCFQYSIQKKWPLYLSTKNT 253
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKS 6 ILK YDGRFKDIFQE+++ +K+ +++ IWYEHRLIDDMVA LKS Sbjct: 254 ILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLIDDMVAQVLKS 300
>sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1 Length = 421
Score = 236 bits (602), Expect = 5e-62 Identities = 110/167 (65%), Positives = 132/167 (79%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNIL GTVF+EPI+CKN+PRLVPGWTKPI IGRHA GDQY+ATD V+ G K+ Sbjct: 104 PNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKI 163
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 VF P G A++ EV++F AGGV + MYNTDESI FA + A +KKWPLY+STK+T Sbjct: 164 VFTPKDGSSAKQWEVYNFP-AGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNT 222
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKS 6 ILK YDGRFKDIFQE++E +K+ +++ IWYEHRLIDDMVA LKS Sbjct: 223 ILKAYDGRFKDIFQEIFEKHYKTDFDKYKIWYEHRLIDDMVAQVLKS 269
>sp|Q5R9C5|IDHC_PONAB Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2 Length = 414
Score = 235 bits (600), Expect = 8e-62 Identities = 109/168 (64%), Positives = 132/168 (78%) Frame = -1
Query: 506 PNGTIRNILNGTVFQEPIVCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKCPGKLKL 327 PNGTIRNIL GTVF+E I+CKN+PRLV GW KPI IGRHA+GDQYRATD V+ PGK+++ Sbjct: 95 PNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEI 154
Query: 326 VFVPSKGGEAEEMEVFDFQGAGGVALSMYNTDESIRSFAEASMAMAFEKKWPLYLSTKHT 147 + PS G + V +F+ GGVA+ MYN D+SI FA +S MA K WPLYLSTK+T Sbjct: 155 TYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNT 214
Query: 146 ILKKYDGRFKDIFQEVYEADWKSKYEEAGIWYEHRLIDDMVAYALKSD 3 ILKKYDGRFKDIFQE+Y+ +KS++E IWYEHRLIDDMVA A+KS+ Sbjct: 215 ILKKYDGRFKDIFQEIYDKQYKSQFEARKIWYEHRLIDDMVAQAMKSE 262
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKH5 |
Definition |
tr|B8LKH5|B8LKH5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
168 |
Score (bit) |
313.0 |
E-value |
3.0e-84 |
Report |
|