BP915562 |
Clone id |
YMU001_000073_B01 |
Library |
YMU01 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000073_B01. |
Accession |
BP915562 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL34Contig1 |
Sequence |
CGATGCCATCGATTAGTTACAATATATGATACGCTCAAGATGGTTTTTCTGGATATGCAT AACTCGAGTCAAGAGCAATATAACTCATATGCCATGAAGAACACTCATTGCTGCTACACC ATCTTTCTCTCTCGTGAGAAGAGGAAGGCTATTTGCCGCTCACAGCAATTCTTTGTTAGT TACCCTCCATCCTAGAGACAGTCTGTACCCACTTAATGCACCTTTTCGACCTTCGACATT GATGCCAAATCTACCGACCAACTCTCAAATGCATTGTTCACAAAATCATAGTAACCGCCA TGAAGAGTCAACTCCCCTGAAGACATCTTTTCTCTAACAAATGGGTATGAAAGGCAGTTC CACAACGCATTGTTTACATTCTCCTTCTCACACTTTGTACACTGCTCTGTAAATTCAGCA GATTGGTGCAAGCTCTTCACCTTCTTAGAGGCAGTTTTCGAAATCAGAATCCAGTCTTCG ATGAATTCGCTGAACCTATTTGACCCATCCTCTTCAATGCCCATCAAAGCTTTGATGGCA CCACATCGGCTGTGGCCAATGACAGCAAGATGCTTCACCTTCAAGTGCAGCACCGCATAC TCAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P42737 |
Definition |
sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana |
Align length |
118 |
Score (bit) |
133.0 |
E-value |
6.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915562|Adiantum capillus-veneris mRNA, clone: YMU001_000073_B01. (605 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 133 6e-31 sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 132 1e-30 sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 132 1e-30 sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 131 2e-30 sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 131 3e-30 sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 130 4e-30 sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 130 7e-30 sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 129 2e-29 sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 129 2e-29 sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 128 3e-29 sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 120 4e-27 sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori G... 66 1e-10 sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori J... 64 8e-10 sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 59 2e-08 sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 56 1e-07 sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (s... 52 2e-06 sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O1... 52 2e-06 sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginos... 48 4e-05 sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenz... 47 8e-05 sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces po... 44 6e-04 sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisi... 40 0.009 sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans GN... 39 0.016 sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN... 37 0.078 sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (st... 37 0.078 sp|Q9PQ79|SYI_UREPA Isoleucyl-tRNA synthetase OS=Ureaplasma parv... 32 2.5 sp|B2KIQ4|WDR76_RHIFE WD repeat-containing protein 76 OS=Rhinolo... 32 3.3 sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=H... 32 3.3 sp|P46551|CD2L7_CAEEL Putative cell division cycle 2-related pro... 31 5.6 sp|Q3E9Z8|FB236_ARATH Putative F-box protein At4g17780 OS=Arabid... 30 9.5
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Length = 259
Score = 133 bits (335), Expect = 6e-31 Identities = 65/118 (55%), Positives = 83/118 (70%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV+++ VIGHS CG IK LM DG+N ++FIEDW+ I A KV + Sbjct: 133 IEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVLAES 191
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSV 252 +S+ F +QC +CE+E VN +L N L+YPFVRE + G L L GGYYDFVN +FE W + Sbjct: 192 ESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWEL 249
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Length = 319
Score = 132 bits (333), Expect = 1e-30 Identities = 65/119 (54%), Positives = 81/119 (68%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV+++ VIGHS CG IK LM + G ++FIEDW+ I A KV + H Sbjct: 193 IEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTT-TDFIEDWVKICLPAKHKVLAEH 251
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVD 249 +A F EQCT CEKE VN +L N L+YPFVR+ + L L GGYYDFVN +FE W ++ Sbjct: 252 GNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLE 310
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Length = 190
Score = 132 bits (333), Expect = 1e-30 Identities = 64/119 (53%), Positives = 86/119 (72%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV+++ VIGHS CG IK LM I +DG+ S+FIE W+ + A KVK+ Sbjct: 64 IEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPA-SDFIEQWVKLGLPAKSKVKANC 122
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVD 249 + EF + CTKCEKE VN +L N L+YPFVR+ + + +L+L G +YDFVN AF+ W++D Sbjct: 123 NNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLD 181
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Length = 347
Score = 131 bits (330), Expect = 2e-30 Identities = 69/131 (52%), Positives = 87/131 (66%), Gaps = 2/131 (1%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV+++ VIGHS CG IK LM DG+N ++FIEDW+ I A KV S Sbjct: 210 IEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVISEL 268
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVD- 249 + F +QC +CE+E VN +L N L+YPFVRE + G L L GGYYDFV AFE W ++ Sbjct: 269 GDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEF 328
Query: 248 -LASMSKVEKV 219 L+ S V+ V Sbjct: 329 GLSETSSVKDV 339
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 321
Score = 131 bits (329), Expect = 3e-30 Identities = 65/119 (54%), Positives = 79/119 (66%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV+++ VIGHS CG IK LM + DGS + FIEDW+ I A KV+ H Sbjct: 195 IEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSES-TAFIEDWVKIGLPAKAKVQGEH 253
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVD 249 F +QCT CEKE VN +L N L+YPFVRE + L L GG+YDFVN FE W ++ Sbjct: 254 VDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLE 312
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 328
Score = 130 bits (328), Expect = 4e-30 Identities = 65/124 (52%), Positives = 81/124 (65%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 IEYAVLHLKV ++ VIGHS CG IK L+ DG+ ++FIE+W+ I A KVK+ H Sbjct: 202 IEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS-TDFIEEWVKIGLPAKAKVKAQH 260
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVDL 246 A F E CT CEKE VN +L N L+YPFVRE + + L L GGYYDFV +FE W ++ Sbjct: 261 GDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEF 320
Query: 245 ASMS 234 S Sbjct: 321 GLSS 324
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Length = 330
Score = 130 bits (326), Expect = 7e-30 Identities = 61/124 (49%), Positives = 82/124 (66%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 +EYAVLHLKV+ + VIGHSRCG IK LM ++G + ++FIEDW+ + A KV + H Sbjct: 204 VEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVVAEH 262
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVDL 246 +QC +CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W++D Sbjct: 263 NGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322
Query: 245 ASMS 234 S Sbjct: 323 GLSS 326
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Length = 329
Score = 129 bits (323), Expect = 2e-29 Identities = 61/124 (49%), Positives = 81/124 (65%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 +EYAVLHLKV+ + VIGHSRCG IK LM ++G + ++FIEDW+ + A KV + H Sbjct: 203 VEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVVAEH 261
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVDL 246 +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W++D Sbjct: 262 NGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321
Query: 245 ASMS 234 S Sbjct: 322 GLSS 325
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Length = 330
Score = 129 bits (323), Expect = 2e-29 Identities = 61/124 (49%), Positives = 81/124 (65%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 +EYAVLHLKV+ + VIGHSRCG IK LM ++G + ++FIEDW+ + A KV + H Sbjct: 204 VEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVVAEH 262
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVDL 246 +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W++D Sbjct: 263 NGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322
Query: 245 ASMS 234 S Sbjct: 323 GLSS 326
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Length = 330
Score = 128 bits (321), Expect = 3e-29 Identities = 61/124 (49%), Positives = 81/124 (65%) Frame = -1
Query: 605 IEYAVLHLKVKHLAVIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVKSLH 426 +EYAVLHLKV+ + VIGHSRCG IK LM ++G + ++FIEDW+ + A KV + H Sbjct: 204 VEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVVAEH 262
Query: 425 QSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWSVDL 246 +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W++D Sbjct: 263 NGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322
Query: 245 ASMS 234 S Sbjct: 323 GLSS 326
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A1XX45 |
Definition |
tr|A1XX45|A1XX45_9MAGN Carbonic anhydrase OS=Pachysandra terminalis |
Align length |
119 |
Score (bit) |
134.0 |
E-value |
3.0e-30 |
Report |
|