BP915568
Clone id YMU001_000073_B08
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACAAAGTGCACTTTTATTCATTTAGCAATCTTTATTGAAGGATAAGACGTGTCAACGACA
TGCTGACCACTTCAGGTAAGCTTTTACATAGAATGGTGCTGATTGTTCAGCTCATCTACA
AGCTCACTCACAAGGAAACGGGAGTGTATGCATAGGATGTGTAGGTCTAGACTGAGTTTA
TAAACAGCTTCCAAAGAGGAGCTTCGCTTCTACTTTATGCTACCTCAAACATGCTCCAAA
TCGCTTCTCGCACGTCATCCATCAAACTAGAACGTCCTGCTTCTGCACCTCCATTCTCTC
TCAGTGCCTCTTCTTCATCTCCAGCTTGCCCATCTCGAGGAGCCCGGCTGCGTGGAGGCA
GCAGGATTGCCGTGTGTCGACGACTGCTTTCCTCATGCACACGCTTGTCCAGCTCCTTAC
TTATCTTGAACATTCCCATTCTCATTTCCGGCCTCATCATATTGAACACTGAATCCTTGC
CTGCAAGGTGCATCGATATTGGCATGTGGCTATTCATG
■■Homology search results ■■ -
sp_hit_id Q8KD63
Definition sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subunit hslU OS=Chlorobium tepidum
Align length 71
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915568|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_B08.
(518 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subu... 33 1.0
sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Glucon... 32 1.4
sp|Q5R8E2|KLC3_PONAB Kinesin light chain 3 OS=Pongo abelii GN=KL... 32 1.8
sp|Q6P597|KLC3_HUMAN Kinesin light chain 3 OS=Homo sapiens GN=KL... 32 1.8
sp|Q4ADK7|CFDP1_CAMDR Craniofacial development protein 1 OS=Came... 30 5.2
sp|P70390|SHOX2_MOUSE Short stature homeobox protein 2 OS=Mus mu... 30 6.8
sp|O60902|SHOX2_HUMAN Short stature homeobox protein 2 OS=Homo s... 30 6.8
sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thali... 30 8.8
sp|Q02897|GLUB2_ORYSJ Glutelin type-B 2 OS=Oryza sativa subsp. j... 30 8.8
sp|Q60FC2|CFDP1_TRAJA Craniofacial development protein 1 OS=Trag... 30 8.8

>sp|Q8KD63|HSLU_CHLTE ATP-dependent hsl protease ATP-binding subunit
hslU OS=Chlorobium tepidum GN=hslU PE=3 SV=1
Length = 491

Score = 32.7 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2

Query: 481 GKDSVFNMMRPEMRMGMFKISKELDKRVHEESS----RRHTAILLPPRSRAPRDGQAGDE 314
G+D V +M+R + + + E + V E+++ R ILLPP S GDE
Sbjct: 109 GRD-VESMIRDLVEQAVAMVRSEKTEEVREKAALLVEERLLDILLPPVSGLEESEHVGDE 167

Query: 313 EEALRENGGAE 281
EEA+ G AE
Sbjct: 168 EEAVVVEGDAE 178


>sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase
OS=Gluconobacter oxydans GN=glnD PE=3 SV=1
Length = 949

Score = 32.3 bits (72), Expect = 1.4
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = -2

Query: 436 GMFKISKELDKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMD 257
G I K ++ H +SRR AI +PP R D A D + NG R L+
Sbjct: 829 GRLDIRKGIEDASHHSTSRRMRAIHVPP--RVVIDNTASDRHTVIEVNG---RDRPGLLH 883

Query: 256 DVREAIWS 233
DV A+ S
Sbjct: 884 DVTSALSS 891


>sp|Q5R8E2|KLC3_PONAB Kinesin light chain 3 OS=Pongo abelii GN=KLC3
PE=2 SV=1
Length = 504

Score = 32.0 bits (71), Expect = 1.8
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -2

Query: 463 NMMRPEMRMGMFKISKELDKRV-HEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGG 287
N+ ++ ++ ++EL K + H+E LP AP G AGD E+ALR
Sbjct: 380 NLASAYLKQNKYQQAEELYKEILHKED--------LPAPLGAPNTGTAGDAEQALR---- 427

Query: 286 AEAGRSSLMDDVREAI 239
RSS + +RE+I
Sbjct: 428 ----RSSSLSKIRESI 439


>sp|Q6P597|KLC3_HUMAN Kinesin light chain 3 OS=Homo sapiens GN=KLC3
PE=1 SV=2
Length = 504

Score = 32.0 bits (71), Expect = 1.8
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -2

Query: 463 NMMRPEMRMGMFKISKELDKRV-HEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGG 287
N+ ++ ++ ++EL K + H+E LP AP G AGD E+ALR
Sbjct: 380 NLASAYLKQNKYQQAEELYKEILHKED--------LPAPLGAPNTGTAGDAEQALR---- 427

Query: 286 AEAGRSSLMDDVREAI 239
RSS + +RE+I
Sbjct: 428 ----RSSSLSKIRESI 439


>sp|Q4ADK7|CFDP1_CAMDR Craniofacial development protein 1 OS=Camelus
dromedarius GN=CFDP1 PE=2 SV=1
Length = 297

Score = 30.4 bits (67), Expect = 5.2
Identities = 19/80 (23%), Positives = 36/80 (45%)
Frame = -2

Query: 409 DKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMDDVREAIWSM 230
+++ + ++ A +P R R +EE+A E+GG+ + + + I +
Sbjct: 42 EEQTQKTKGKKRKAQSIPARKRKQGLSLEEEEEDANEESGGSSSEEEDAAAEQEKGIGA- 100

Query: 229 FEVA*SRSEAPLWKLFINSV 170
E A + E LW F+N V
Sbjct: 101 -EDARKKKEDELWASFLNDV 119


>sp|P70390|SHOX2_MOUSE Short stature homeobox protein 2 OS=Mus
musculus GN=Shox2 PE=2 SV=1
Length = 331

Score = 30.0 bits (66), Expect = 6.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2

Query: 359 QQD--CRVSTTAFLMHTLVQLLTYLEHSHSHFRPHHIEH 469
QQD C V+ +F + +QL + + H+H H PH H
Sbjct: 233 QQDSHCNVTPLSFQVQAQLQLDSAVAHAHHHLHPHLAAH 271


>sp|O60902|SHOX2_HUMAN Short stature homeobox protein 2 OS=Homo
sapiens GN=SHOX2 PE=2 SV=4
Length = 331

Score = 30.0 bits (66), Expect = 6.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2

Query: 359 QQD--CRVSTTAFLMHTLVQLLTYLEHSHSHFRPHHIEH 469
QQD C V+ +F + +QL + + H+H H PH H
Sbjct: 233 QQDSHCNVTPLSFQVQAQLQLDSAVAHAHHHLHPHLAAH 271


>sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thaliana
GN=COAA PE=2 SV=2
Length = 383

Score = 29.6 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2

Query: 419 TYLEHSHSHFRPHH--IEH*ILACKVHRYWHVAI 514
+Y + SH+ +PHH ++ IL C H + H+ +
Sbjct: 333 SYNDQSHNDLKPHHHTVQRAILNCSGHNFRHIPV 366


>sp|Q02897|GLUB2_ORYSJ Glutelin type-B 2 OS=Oryza sativa subsp.
japonica GN=GLUB2 PE=2 SV=2
Length = 495

Score = 29.6 bits (65), Expect = 8.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2

Query: 490 HLAGKDSVFNMMRPEMRMGMFKISKELDKRVHEESSRRHTA 368
HLAGK+SVF + ++ ++IS+E + + H A
Sbjct: 432 HLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGA 472


>sp|Q60FC2|CFDP1_TRAJA Craniofacial development protein 1
OS=Tragulus javanicus GN=CFDP1 PE=2 SV=1
Length = 298

Score = 29.6 bits (65), Expect = 8.8
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2

Query: 415 ELDKRVHEESSRRHTAILLPPRSRAPRDG----QAGDEEEALRENGGAEAGRSSLMDDVR 248
++++ H + A PR R + G + DEE+A RE+GG+ + +
Sbjct: 40 DVEEETHIIKGTKRKAERFMPRKR--KQGGLSLEEEDEEDAGRESGGSGSEEEDTATEQE 97

Query: 247 EAIWSMFEVA*SRSEAPLWKLFINSV 170
E S E A + E LW F+N V
Sbjct: 98 EGTES--EDARKKKEDELWASFLNDV 121


tr_hit_id Q9LQQ3
Definition tr|Q9LQQ3|Q9LQQ3_ARATH F24B9.13 protein (At1g07750/F24B9_13) (Putative globulin protein) OS=Arabidopsis thaliana
Align length 50
Score (bit) 39.7
E-value 0.091
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915568|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_B08.
(518 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9LQQ3|Q9LQQ3_ARATH F24B9.13 protein (At1g07750/F24B9_13) (Pu... 40 0.091
tr|Q8LA49|Q8LA49_ARATH Globulin-like protein OS=Arabidopsis thal... 40 0.091
tr|Q9SIA7|Q9SIA7_ARATH Legumin-like protein (Cupin family protei... 36 1.3
tr|B2VY02|B2VY02_PYRTR ATP-dependent RNA helicase DHH1 OS=Pyreno... 35 1.7
tr|Q8NNN4|Q8NNN4_CORGL Bacterial cell division membrane protein ... 35 2.2
tr|A4QFM4|A4QFM4_CORGB Putative uncharacterized protein OS=Coryn... 35 2.2
tr|Q1R1N4|Q1R1N4_CHRSD Lipopolysaccharide heptosyltransferase II... 34 3.8
tr|A5VB52|A5VB52_SPHWW Fusaric acid resistance protein conserved... 34 3.8
tr|A4YG92|A4YG92_METS5 Carboxymethylenebutenolidase OS=Metallosp... 34 5.0
tr|Q6Z380|Q6Z380_ORYSJ Putative uncharacterized protein P0519E02... 33 6.5
tr|B3MQ55|B3MQ55_DROAN GF20305 OS=Drosophila ananassae GN=GF2030... 33 6.5

>tr|Q9LQQ3|Q9LQQ3_ARATH F24B9.13 protein (At1g07750/F24B9_13)
(Putative globulin protein) OS=Arabidopsis thaliana
GN=At1g07750 PE=2 SV=1
Length = 356

Score = 39.7 bits (91), Expect = 0.091
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2

Query: 502 PISMHLAGKDSVFNMMRPEMRMGMFKISKELDKRVHEESSRRHTAILLPP 353
PI HLAG SV+ + PE+ FK++ E++K S+R +AI PP
Sbjct: 307 PIFTHLAGNTSVWKSLSPEVLQAAFKVAPEVEKSF--RSTRTSSAIFFPP 354


>tr|Q8LA49|Q8LA49_ARATH Globulin-like protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 356

Score = 39.7 bits (91), Expect = 0.091
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2

Query: 502 PISMHLAGKDSVFNMMRPEMRMGMFKISKELDKRVHEESSRRHTAILLPP 353
PI HLAG SV+ + PE+ FK++ E++K S+R +AI PP
Sbjct: 307 PIFTHLAGNTSVWKSLSPEVLQAAFKVAPEVEKSF--RSTRTSSAIFFPP 354


>tr|Q9SIA7|Q9SIA7_ARATH Legumin-like protein (Cupin family protein)
OS=Arabidopsis thaliana GN=At2g28680 PE=2 SV=1
Length = 356

Score = 35.8 bits (81), Expect = 1.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2

Query: 502 PISMHLAGKDSVFNMMRPEMRMGMFKISKELDKRVHEESSRRHTAILLPP 353
PI HLAG+ SV+ + PE+ FK+ E++K S R AI P
Sbjct: 307 PIFTHLAGRTSVWKALSPEVLQAAFKVDPEVEKAF--RSKRTSDAIFFSP 354


>tr|B2VY02|B2VY02_PYRTR ATP-dependent RNA helicase DHH1
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_03390 PE=4 SV=1
Length = 512

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -2

Query: 508 HMPISMHLAGKDSVFNMMRPEMRMG--MFKISKELDKRVHEESSRRHTAILLPPRSRAPR 335
H+ ++++L + FN+ R E +G + I + ++K ++ S + + RAP
Sbjct: 382 HLGLAINLINWEDRFNLYRIEQELGTEIQPIPQVIEKNLYVYESPESIPRPMSNQQRAPG 441

Query: 334 DGQAGDEEEALRENGGAEAG 275
GQ D+E A R N A G
Sbjct: 442 QGQPQDQEGAARGNPNARGG 461


>tr|Q8NNN4|Q8NNN4_CORGL Bacterial cell division membrane protein
OS=Corynebacterium glutamicum GN=ftsW PE=4 SV=1
Length = 550

Score = 35.0 bits (79), Expect = 2.2
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -2

Query: 394 EESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMDDVR 248
+ES R + R++APR G+AG + EA R + G+ GRSS D+ R
Sbjct: 455 KESRDRFGEPVTARRAQAPRSGRAGVQSEAPRRSTGSVKGRSSGQDNGR 503


>tr|A4QFM4|A4QFM4_CORGB Putative uncharacterized protein
OS=Corynebacterium glutamicum (strain R) GN=cgR_2041
PE=4 SV=1
Length = 550

Score = 35.0 bits (79), Expect = 2.2
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -2

Query: 394 EESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLMDDVR 248
+ES R + R++APR G+AG + EA R + G+ GRSS D+ R
Sbjct: 455 KESRDRFGEPVTARRAQAPRSGRAGVQSEAPRRSTGSVKGRSSGQDNGR 503


>tr|Q1R1N4|Q1R1N4_CHRSD Lipopolysaccharide heptosyltransferase II
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=Csal_0009 PE=4 SV=1
Length = 349

Score = 34.3 bits (77), Expect = 3.8
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Frame = -2

Query: 448 EMRMGMFKISKELDKRVHEESSRRHTAILLPPRSR--------APRDGQAGDEEEALREN 293
E R + ++LDKRV +++ +R ++ LP APR GDE++ LR++
Sbjct: 118 EQRYWLLNARRQLDKRVLDQTVKRFVSLGLPEEQALTGDFAIPAPRLDVNGDEQQRLRDS 177

Query: 292 GGAEAG 275
G +G
Sbjct: 178 LGLSSG 183


>tr|A5VB52|A5VB52_SPHWW Fusaric acid resistance protein conserved
region OS=Sphingomonas wittichii (strain RW1 / DSM 6014
/ JCM 10273) GN=Swit_3170 PE=4 SV=1
Length = 716

Score = 34.3 bits (77), Expect = 3.8
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2

Query: 439 MGMFKISKELDKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAEAGRSSLM 260
+GM I D+R + RR TA+ S P A + + LR+ GG A +L+
Sbjct: 252 LGMIAIHLPFDQRWAPATKRRVTALQQQLASILPLASAAANRLDRLRDGGGLPAELEALL 311

Query: 259 DDVRE 245
DDV +
Sbjct: 312 DDVSD 316


>tr|A4YG92|A4YG92_METS5 Carboxymethylenebutenolidase
OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348)
GN=Msed_1285 PE=4 SV=1
Length = 263

Score = 33.9 bits (76), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2

Query: 502 PISMHLAGKDSVFNMMRPEMRMGMFKISKELDKRVH 395
P+ H AG+DS N P+M M + KELD +++
Sbjct: 192 PVLAHYAGEDSAINQGVPDMVRAMIQYKKELDMKIY 227


>tr|Q6Z380|Q6Z380_ORYSJ Putative uncharacterized protein P0519E02.27
(Putative uncharacterized protein OSJNBa0081K20.2)
OS=Oryza sativa subsp. japonica GN=P0519E02.27 PE=4 SV=1
Length = 109

Score = 33.5 bits (75), Expect = 6.5
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -2

Query: 460 MMRPEMRMGMFKISKELDKRVHEESSRRHTAILLPPRSRAPRDGQAGDEEEALRENGGAE 281
+ RP +R ++ L +R HE +SR+ A PPR+ PR G AG A+ E GG E
Sbjct: 36 LARPSVRRAACRV---LGRR-HEAASRQRAASPGPPRATPPR-GPAGPLRPAVAEGGGEE 90