NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915569
Clone id YMU001_000073_B09
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGATGAGTTGAGAATACCCGTAAAATTCGTGGGTATAGGAGAAAGGCTGGAAGATCTTCA
GCCATTTGATGCTGAGGCTTTTGTAGAAGCAGTTTTCCCCTGATATTCATGTCCTACTGC
TGAAAGAGAGATTTGTTTCTGGTTTTCCTCTGCTCTCATTGTTTGTAAGAAAGATTCAAT
CAGCTGATAGCGGCTTACAAGGCTTTAGAGCAGGGATATGAAGTTAATGATGCCGGCAGA
ACCTCCTCTTTGGAACATGTGTCTGGGTAAAGCTCAGAAGTTATGATGTGCTTGAGAGGA
TATCTTATATGACCGAAGTTAGCGTAGGATACGAGCTGCTTGGCAAAAGTGACAGCAGCA
AGCATCTGGAGAGGAGAGCGATTATTCACAATCTCTACACTTTGCCAAACACGTTATTGT
GCTCCATTTTTGGAAGGTAAGCTGTTGATGAGCTCTGGTGCTGGTTCAAGGAGAGTTTTT
ACTCCTGTTTGTATTCATGAAAACTATATTATTATGGTCAGTATTGTATATACTCAGATG
AGGAAAATGAAGCAAC
■■Homology search results ■■ -
sp_hit_id O67066
Definition sp|O67066|FTSY_AQUAE Cell division protein ftsY homolog OS=Aquifex aeolicus
Align length 30
Score (bit) 49.7
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915569|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_B09.
         (556 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O67066|FTSY_AQUAE Cell division protein ftsY homolog OS=Aquif...    50   1e-05
sp|P83749|FTSY_THEAQ Cell division protein ftsY OS=Thermus aquat...    48   3e-05
sp|P10121|FTSY_ECOLI Cell division protein ftsY OS=Escherichia c...    48   4e-05
sp|P44870|FTSY_HAEIN Cell division protein ftsY homolog OS=Haemo...    45   2e-04
sp|P51835|FTSY_BACSU Cell division protein ftsY homolog OS=Bacil...    44   7e-04
sp|O30391|FTSY_NEIMC Cell division protein ftsY homolog OS=Neiss...    43   0.001
sp|P57011|FTSY_NEIMB Cell division protein ftsY homolog OS=Neiss...    43   0.001
sp|P57010|FTSY_NEIMA Cell division protein ftsY homolog OS=Neiss...    43   0.001
sp|P57137|FTSY_BUCAI Cell division protein ftsY homolog OS=Buchn...    42   0.002
sp|P14929|FTSY_NEIGO Cell division protein ftsY homolog OS=Neiss...    41   0.005
sp|P73930|FTSY_SYNY3 Cell division protein ftsY homolog OS=Synec...    40   0.008
sp|Q57565|SRP54_METJA Signal recognition 54 kDa protein OS=Metha...    40   0.010
sp|Q2NE47|SRP54_METST Signal recognition 54 kDa protein OS=Metha...    39   0.013
sp|Q5JJC8|SRP54_PYRKO Signal recognition 54 kDa protein OS=Pyroc...    39   0.017
sp|P66842|FTSY_MYCTU Cell division protein ftsY homolog OS=Mycob...    39   0.017
sp|P66843|FTSY_MYCBO Cell division protein ftsY homolog OS=Mycob...    39   0.017
sp|O59307|SRP54_PYRHO Signal recognition 54 kDa protein OS=Pyroc...    39   0.022
sp|A6UWG4|SRP54_META3 Signal recognition 54 kDa protein OS=Metha...    39   0.022
sp|O27376|SRP54_METTH Signal recognition 54 kDa protein OS=Metha...    38   0.029
sp|O33010|FTSY_MYCLE Cell division protein ftsY homolog OS=Mycob...    37   0.050
sp|Q9V1E8|SRP54_PYRAB Signal recognition 54 kDa protein OS=Pyroc...    37   0.065
sp|Q8U070|SRP54_PYRFU Signal recognition 54 kDa protein OS=Pyroc...    36   0.11 
sp|O67615|SRP54_AQUAE Signal recognition particle protein OS=Aqu...    36   0.11 
sp|P27414|DOCK_SULAC Probable signal recognition particle protei...    35   0.19 
sp|O25458|FTSY_HELPY Cell division protein ftsY homolog OS=Helic...    35   0.25 
sp|Q9ZL80|FTSY_HELPJ Cell division protein ftsY homolog OS=Helic...    35   0.25 
sp|Q8TUY9|SRP54_METKA Signal recognition 54 kDa protein OS=Metha...    34   0.42 
sp|Q55311|SRP54_SYNE7 Signal sequence-binding protein OS=Synecho...    34   0.55 
sp|O32861|FTSY_MYCHO Cell division protein ftsY homolog OS=Mycop...    34   0.55 
sp|Q8KA77|FTSY_BUCAP Cell division protein ftsY homolog OS=Buchn...    34   0.55 

>sp|O67066|FTSY_AQUAE Cell division protein ftsY homolog OS=Aquifex
           aeolicus GN=ftsY PE=3 SV=1
          Length = 461

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 28/30 (93%)
 Frame = +2

Query: 5   ELRIPVKFVGIGERLEDLQPFDAEAFVEAV 94
           EL+IP+K VG+GE ++DLQPFDA+A+VEA+
Sbjct: 430 ELKIPIKLVGVGEGIDDLQPFDADAYVEAL 459


>sp|P83749|FTSY_THEAQ Cell division protein ftsY OS=Thermus
           aquaticus GN=ftsY PE=1 SV=2
          Length = 304

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 20/29 (68%), Positives = 26/29 (89%)
 Frame = +2

Query: 8   LRIPVKFVGIGERLEDLQPFDAEAFVEAV 94
           L++P+KFVG+GE  +DLQPFD EAFVEA+
Sbjct: 273 LKVPIKFVGVGEGPDDLQPFDPEAFVEAL 301


>sp|P10121|FTSY_ECOLI Cell division protein ftsY OS=Escherichia coli
           (strain K12) GN=ftsY PE=1 SV=1
          Length = 497

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 17/32 (53%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVF 97
           D+  IP++++G+GER+EDL+PF A+ F+EA+F
Sbjct: 462 DQFGIPIRYIGVGERIEDLRPFKADDFIEALF 493


>sp|P44870|FTSY_HAEIN Cell division protein ftsY homolog
           OS=Haemophilus influenzae GN=ftsY PE=3 SV=1
          Length = 414

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 14/32 (43%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVF 97
           D+ ++P++++G+GE++EDL+ F+A+ F+EA+F
Sbjct: 378 DQFKLPIRYIGVGEKIEDLREFNAKEFIEALF 409


>sp|P51835|FTSY_BACSU Cell division protein ftsY homolog OS=Bacillus
           subtilis GN=ftsY PE=1 SV=2
          Length = 329

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVF 97
           +EL IPVK VG+GE+++DLQ FD E++V  +F
Sbjct: 289 NELHIPVKLVGLGEKVDDLQEFDPESYVYGLF 320


>sp|O30391|FTSY_NEIMC Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup C GN=ftsY PE=3 SV=1
          Length = 421

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 15/27 (55%), Positives = 25/27 (92%)
 Frame = +2

Query: 14  IPVKFVGIGERLEDLQPFDAEAFVEAV 94
           +PV+++G+GE ++DL+PFDA AFV+A+
Sbjct: 393 VPVRYIGVGEGIDDLRPFDARAFVDAL 419


>sp|P57011|FTSY_NEIMB Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup B GN=ftsY PE=3 SV=1
          Length = 421

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 15/27 (55%), Positives = 25/27 (92%)
 Frame = +2

Query: 14  IPVKFVGIGERLEDLQPFDAEAFVEAV 94
           +PV+++G+GE ++DL+PFDA AFV+A+
Sbjct: 393 VPVRYIGVGEGIDDLRPFDARAFVDAL 419


>sp|P57010|FTSY_NEIMA Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup A GN=ftsY PE=3 SV=1
          Length = 421

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 15/27 (55%), Positives = 25/27 (92%)
 Frame = +2

Query: 14  IPVKFVGIGERLEDLQPFDAEAFVEAV 94
           +PV+++G+GE ++DL+PFDA AFV+A+
Sbjct: 393 VPVRYIGVGEGIDDLRPFDARAFVDAL 419


>sp|P57137|FTSY_BUCAI Cell division protein ftsY homolog OS=Buchnera
           aphidicola subsp. Acyrthosiphon pisum GN=ftsY PE=3 SV=1
          Length = 378

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 13/32 (40%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVF 97
           D+ +IP++++GIGE+++DL  F+++ F+E++F
Sbjct: 346 DQFQIPIRYIGIGEKMQDLGHFNSQEFIESIF 377


>sp|P14929|FTSY_NEIGO Cell division protein ftsY homolog
           OS=Neisseria gonorrhoeae GN=ftsY PE=1 SV=2
          Length = 416

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 14/25 (56%), Positives = 23/25 (92%)
 Frame = +2

Query: 14  IPVKFVGIGERLEDLQPFDAEAFVE 88
           +PV+++G+GE ++DL+PFDA AFV+
Sbjct: 388 VPVRYIGVGEGIDDLRPFDARAFVD 412
tr_hit_id Q7XAF9
Definition tr|Q7XAF9|Q7XAF9_MAIZE Chloroplast SRP receptor cpFtsY OS=Zea mays
Align length 33
Score (bit) 62.0
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915569|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_B09.
         (556 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XAF9|Q7XAF9_MAIZE Chloroplast SRP receptor cpFtsY OS=Zea ma...    62   2e-08
tr|Q5JK67|Q5JK67_ORYSJ cDNA clone:001-017-E11, full insert seque...    62   2e-08
tr|Q5JK66|Q5JK66_ORYSJ cDNA clone:006-207-D11, full insert seque...    62   2e-08
tr|Q0JFW3|Q0JFW3_ORYSJ Os01g0958100 protein (Fragment) OS=Oryza ...    62   2e-08
tr|B8A9J0|B8A9J0_ORYSI Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|B6TZA9|B6TZA9_MAIZE Cell division protein ftsY OS=Zea mays PE...    62   2e-08
tr|A3A1P8|A3A1P8_ORYSJ Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|A9SNI6|A9SNI6_PHYPA Predicted protein OS=Physcomitrella paten...    57   5e-07
tr|A7PXY2|A7PXY2_VITVI Chromosome chr15 scaffold_37, whole genom...    56   1e-06
tr|A8J831|A8J831_CHLRE Chloroplast SRP receptor (Fragment) OS=Ch...    55   3e-06
tr|Q014I0|Q014I0_OSTTA Chloroplast SRP receptor cpFtsY (ISS) OS=...    55   3e-06
tr|Q9SWS7|Q9SWS7_ARATH Chloroplast SRP receptor homolog, alpha s...    54   6e-06
tr|O80842|O80842_ARATH Putative signal recognition particle rece...    54   6e-06
tr|B6XYD3|B6XYD3_ANATH Signal recognition particle-docking prote...    51   4e-05
tr|Q67PF1|Q67PF1_SYMTH Signal recognition particle OS=Symbiobact...    51   5e-05
tr|B3GYC6|B3GYC6_ACTP7 Cell division protein FtsY-like protein O...    51   5e-05
tr|B0BQT5|B0BQT5_ACTPJ Cell division protein OS=Actinobacillus p...    51   5e-05
tr|A3N1Z4|A3N1Z4_ACTP2 Cell division protein FtsY-like protein O...    51   5e-05
tr|A7JVS9|A7JVS9_PASHA Cell division protein FtsY OS=Mannheimia ...    51   5e-05
tr|B2V7V2|B2V7V2_SULSY Signal recognition particle-docking prote...    50   6e-05
tr|A4XJX7|A4XJX7_CALS8 Signal recognition particle-docking prote...    50   6e-05
tr|A0Q0Y6|A0Q0Y6_CLONN Signal recognition particle-docking prote...    50   6e-05
tr|B1BE29|B1BE29_CLOBO Signal recognition particle-docking prote...    50   6e-05
tr|A6CS76|A6CS76_9BACI Signal recognition particle-docking prote...    50   6e-05
tr|B1YIM9|B1YIM9_EXIS2 Signal recognition particle-docking prote...    50   8e-05
tr|A4IM69|A4IM69_GEOTN Signal recognition particle-docking prote...    50   8e-05
tr|B4BJ72|B4BJ72_9BACI Signal recognition particle-docking prote...    50   8e-05
tr|Q65JQ3|Q65JQ3_BACLD FtsY OS=Bacillus licheniformis (strain DS...    50   1e-04
tr|Q2INR8|Q2INR8_ANADE Signal recognition particle-docking prote...    50   1e-04
tr|B4UDF5|B4UDF5_ANASK Signal recognition particle-docking prote...    50   1e-04

>tr|Q7XAF9|Q7XAF9_MAIZE Chloroplast SRP receptor cpFtsY OS=Zea mays
           GN=csr1 PE=2 SV=1
          Length = 362

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 330 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 362


>tr|Q5JK67|Q5JK67_ORYSJ cDNA clone:001-017-E11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1294_F06.26-1 PE=2
           SV=1
          Length = 363

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 331 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 363


>tr|Q5JK66|Q5JK66_ORYSJ cDNA clone:006-207-D11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1294_F06.26-2 PE=2
           SV=1
          Length = 199

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 167 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 199


>tr|Q0JFW3|Q0JFW3_ORYSJ Os01g0958100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0958100 PE=4 SV=1
          Length = 347

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 315 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 347


>tr|B8A9J0|B8A9J0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05275 PE=4 SV=1
          Length = 363

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 331 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 363


>tr|B6TZA9|B6TZA9_MAIZE Cell division protein ftsY OS=Zea mays PE=2
           SV=1
          Length = 362

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 330 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 362


>tr|A3A1P8|A3A1P8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004720 PE=4 SV=1
          Length = 377

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKF+G+GE +EDLQPFDAEAFVEA+FP
Sbjct: 345 DELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP 377


>tr|A9SNI6|A9SNI6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_132686 PE=4 SV=1
          Length = 383

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           DEL IPVKFVG+GE ++DLQPFDA++FV+A+FP
Sbjct: 351 DELSIPVKFVGVGEGIDDLQPFDAQSFVDALFP 383


>tr|A7PXY2|A7PXY2_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026227001
           PE=4 SV=1
          Length = 367

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVF 97
           DEL IPVKFVG+GE +EDLQPFDAE FV A+F
Sbjct: 335 DELGIPVKFVGVGEGVEDLQPFDAEVFVNAIF 366


>tr|A8J831|A8J831_CHLRE Chloroplast SRP receptor (Fragment)
           OS=Chlamydomonas reinhardtii GN=FTSY PE=4 SV=1
          Length = 338

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = +2

Query: 2   DELRIPVKFVGIGERLEDLQPFDAEAFVEAVFP 100
           D+L +PVKF+G+GE  EDLQPFD EAF EA+FP
Sbjct: 295 DQLGLPVKFIGVGETAEDLQPFDPEAFAEALFP 327