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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915587
Clone id YMU001_000073_D04
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GACAAAAAAACATGCAGAGCGGTTCATAGCCAATATGGCATGTCTTTTCAAATACACCCA
TAAAGGGTAGTATGTCCTCTTGATCCAAAATTTAACCCTTGATTAAGATCGGAACATGCC
TAGACATCTGCACCGGAACTCCACTCTCCAAACTTGCTGAGAAAGGGGTTTTCAACAAGC
GCAGATACAAAATTCCAGACATCACATTTTGATTTAATGCCACCCCTCAAGAATCTGTCT
GCTCTTCAGACCCTGAAATGCCAAAAAGAAAATCGGCAAATGTCAATACACGTCCTTCAG
CAAGTGGCATGCACTGGCGTCTTTAAACAGCGTGTGATTGTTAACCTAATTTCTGCAAAC
CTATGCAACATACTGAGAGTACATGTACCACACAGACTCATCACCAGAACTCTGGGAATT
GACTGTTTGACTTTACCTTTCTACATCATCTTATACGCAAATGAAGCACTTTCAAATGTT
TA
■■Homology search results ■■ -
sp_hit_id B0JR45
Definition sp|B0JR45|PYRB_MICAN Aspartate carbamoyltransferase OS=Microcystis aeruginosa (strain NIES-843)
Align length 52
Score (bit) 30.4
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915587|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D04.
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0JR45|PYRB_MICAN Aspartate carbamoyltransferase OS=Microcyst...    30   4.4  
sp|Q10439|YDE5_SCHPO Uncharacterized peptidase C12B10.05 OS=Schi...    30   7.5  

>sp|B0JR45|PYRB_MICAN Aspartate carbamoyltransferase OS=Microcystis
           aeruginosa (strain NIES-843) GN=pyrB PE=3 SV=1
          Length = 326

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 124 TSAPELH---SPNLLRKGFSTSADTKFQTSHFDLMPPLKNLSALQTLKCQKE 270
           T+  E+H    P LL K F    D  F   H+DL P L+    + TL+ QKE
Sbjct: 194 TAGAEVHLSAPPTLLPKYFGELCDRLFL--HWDLEPALEKADFVMTLRLQKE 243


>sp|Q10439|YDE5_SCHPO Uncharacterized peptidase C12B10.05
           OS=Schizosaccharomyces pombe GN=SPAC12B10.05 PE=2 SV=2
          Length = 486

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 133 PELHSPNLLRKGFSTSADTKFQTSHFDLMPPLKNLSALQTLKCQKENRQMSIHVLQQV 306
           P   +P  ++   +    T  Q S  +L+ PL+++ +   L+C KE   +S +V +++
Sbjct: 200 PAASAPEFIQDTLTKLFRTSTQRSVDELLHPLRSIKSTAELECMKEAANISSNVYREI 257
tr_hit_id A5AYS8
Definition tr|A5AYS8|A5AYS8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 129
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915587|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D04.
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AYS8|A5AYS8_VITVI Putative uncharacterized protein OS=Vitis...    33   5.4  
tr|Q2GPY3|Q2GPY3_CHAGB Putative uncharacterized protein OS=Chaet...    33   7.0  
tr|Q0U7R8|Q0U7R8_PHANO Putative uncharacterized protein OS=Phaeo...    33   7.0  

>tr|A5AYS8|A5AYS8_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_039838 PE=4 SV=1
          Length = 1849

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
 Frame = +1

Query: 133  PELHSPNLLRKGFSTSADTKFQTSHFDLMP-PLKNLSALQTLK---CQKEN-----RQMS 285
            P L+ PN   KG           +HF  +P  L +L+ LQTL+   C+ E+     +   
Sbjct: 1365 PSLNIPNTFFKGMKKLKVLDLPKTHFTTLPSSLDSLTNLQTLRLDGCKLEDIALIGKLTK 1424

Query: 286  IHVLQQVACT-----GVFKQRVIVNLISANLCNILRVHVPHRLITRTLGIDCLTLPFYII 450
            + VL  +  T         +   + L+  N C  L V +P  +++    ++CL +     
Sbjct: 1425 LEVLSLMGSTIQQLPNEMSRLTNLRLLDLNDCEKLEV-IPRNILSSLSQLECLYMKSSFT 1483

Query: 451  LYANEALSN 477
             +A E  SN
Sbjct: 1484 QWATEGESN 1492


>tr|Q2GPY3|Q2GPY3_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_09971 PE=3 SV=1
          Length = 1086

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = +1

Query: 238 SALQTLKCQKENRQMSIHVLQQVACTGVFKQR-VIVNLISANL----CNILRVHVPH 393
           S  +  +  KEN   +I V  Q A TG+F  + V++ +I+  L    C+++RV  PH
Sbjct: 285 SVKEAAQMMKENHTTAILVTDQGAITGIFTSKDVVLRVIAPGLDPATCSVVRVMTPH 341


>tr|Q0U7R8|Q0U7R8_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_12196 PE=4 SV=2
          Length = 671

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +1

Query: 217 MPPLK---NLSALQTLKCQKENRQMSIHVLQQVACTGVFKQR-VIVNLISANL----CNI 372
           +PP+      S  +     KEN   ++ V  Q + TG+F  + V++ +I+A L    C++
Sbjct: 272 LPPVTVSVRTSVKEAASLMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAAGLDPATCSV 331

Query: 373 LRVHVPH 393
           +RV  PH
Sbjct: 332 VRVMTPH 338