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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915589
Clone id YMU001_000073_D06
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACAAGAAGGGATCCAATTCTTCTGCAGATTTAAAACAGCAACAGATGATGCATACTGTT
GCAAGGATATCTGCCACCCTACCCAAGCTATTTAGGCACGAATCCGACTTTTTAAGAGGA
GCGGGTATGTCTACAGGTGGATATAGAGCTAGTATGCTTGGTATGTGGGGAGGTTGTTTG
GCATGGAGCCTGGCATGTAGGGATTCCCTTATGGATTCCACAAGGGTGGGATCAATGGTA
TACAGAGGAGGAATGCCGCCGACTTTTGGCAAGACGTTTGGTGGATTTCATTAGAGACTG
TGACTGGATGCCTGACAAACACTTCCTTCCTTTAGTCCACTGAGCACACTCATGAGTAGC
ATCCGCAAGTAGGATTGTTGGCACAATAGAAGCCGTTCAATTTTTAAAATCCTACTCAGG
TAAATTTGAACTTGTTGATATGGATGGTGAGCATATAATGCTACTAACATGAACACCTGA
AGAGTATTGTGTGGAGGGATTTGACTTTTATTTTCGTAAACTGTGAAAGTTTAGTCGTGA
ATTT
■■Homology search results ■■ -
sp_hit_id Q7V6J8
Definition sp|Q7V6J8|DXR_PROMM 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313)
Align length 63
Score (bit) 34.7
E-value 0.31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915589|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D06.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7V6J8|DXR_PROMM 1-deoxy-D-xylulose 5-phosphate reductoisomer...    35   0.31 
sp|Q4L1J4|MAGI1_RAT Membrane-associated guanylate kinase, WW and...    33   1.2  
sp|Q92733|PRCC_HUMAN Proline-rich protein PRCC OS=Homo sapiens G...    31   3.4  
sp|P27137|TFDF1_RALEJ Maleylacetate reductase 1 OS=Ralstonia eut...    30   5.8  
sp|P04706|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1                  30   7.6  

>sp|Q7V6J8|DXR_PROMM 1-deoxy-D-xylulose 5-phosphate reductoisomerase
           OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3
           SV=1
          Length = 412

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -3

Query: 233 DPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIPAPLKKSDSCLNSLGRVADILATV 54
           D +L+  +++ L+A    +QPPH+P +LA    +++ A    +D  ++ +   A +L T+
Sbjct: 53  DASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTL 112

Query: 53  CII 45
             I
Sbjct: 113 AAI 115


>sp|Q4L1J4|MAGI1_RAT Membrane-associated guanylate kinase, WW and
           PDZ domain-containing protein 1 OS=Rattus norvegicus
           GN=Magi1 PE=1 SV=1
          Length = 1255

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 188 LHAKQPPHIPSILALYPPVDIPAP 117
           LH   P H   +L  YPP D+PAP
Sbjct: 754 LHTASPSHSAQVLPEYPPADVPAP 777


>sp|Q92733|PRCC_HUMAN Proline-rich protein PRCC OS=Homo sapiens
           GN=PRCC PE=1 SV=1
          Length = 491

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -3

Query: 284 PPNVLP-KVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHI---PSILALYPPVDIPAP 117
           PP  LP  +GG PP   + P     + E L   L + + P +   P I    PP+ +P P
Sbjct: 79  PPPPLPFGLGGFPPPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKP 138

Query: 116 LKKSD 102
            K+ +
Sbjct: 139 KKRKE 143


>sp|P27137|TFDF1_RALEJ Maleylacetate reductase 1 OS=Ralstonia
           eutropha (strain JMP134) GN=tfdFI PE=3 SV=1
          Length = 354

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 353 MSVLSGLKEGSVCQASSHSL**NPPNVLPKVGGIPPLYTIDPTLVESIRESLHARLHAKQ 174
           M+ + G+ EG + +          P VLPK     PL T+D  L  S+  +L+A  HA +
Sbjct: 124 MTTIWGVTEGGMKRTG------RDPKVLPKTVIYDPLLTVDLPLAISVTSALNAIAHAAE 177


>sp|P04706|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1
          Length = 223

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 24/93 (25%), Positives = 37/93 (39%)
 Frame = -3

Query: 395 RLLLCQQSYLRMLLMSVLSGLKEGSVCQASSHSL**NPPNVLPKVGGIPPLYTIDPTLVE 216
           R+LL   + L +   +  +    G  CQ         PP  LP    +PP   + P +  
Sbjct: 2   RVLLVALALLALAASATSTHTSGGCGCQPP-------PPVHLPPPVHLPPPVHLPPPV-- 52

Query: 215 SIRESLHARLHAKQPPHIPSILALYPPVDIPAP 117
                L   +H   P H+P  + + PPV +P P
Sbjct: 53  ----HLPPPVHLPPPVHLPPPVHVPPPVHLPPP 81
tr_hit_id Q4S2D6
Definition tr|Q4S2D6|Q4S2D6_TETNG Chromosome 16 SCAF14763, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 73
Score (bit) 38.5
E-value 0.23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915589|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D06.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4S2D6|Q4S2D6_TETNG Chromosome 16 SCAF14763, whole genome sho...    39   0.23 
tr|A5D102|A5D102_PELTS Type II secretory pathway, component ExeA...    38   0.39 
tr|A5CZH4|A5CZH4_PELTS Type II secretory pathway, component ExeA...    38   0.39 
tr|Q21ZE5|Q21ZE5_RHOFD Putative uncharacterized protein OS=Rhodo...    36   1.1  
tr|A2C806|A2C806_PROM3 1-deoxy-D-xylulose 5-phosphate reductoiso...    35   3.3  
tr|Q2H247|Q2H247_CHAGB Putative uncharacterized protein OS=Chaet...    34   4.4  
tr|Q90050|Q90050_FHV1 Herpes simplex virus glycoprotein B (GB) h...    34   5.7  
tr|Q8S9E8|Q8S9E8_WHEAT P450 OS=Triticum aestivum GN=CYP71C7v2 PE...    33   7.4  
tr|Q8GZU7|Q8GZU7_WHEAT Cytochrome P450 OS=Triticum aestivum PE=2...    33   7.4  
tr|Q58A33|Q58A33_WHEAT P450 OS=Triticum aestivum GN=CYP71C7v1 PE...    33   7.4  
tr|Q58A32|Q58A32_WHEAT P450 OS=Triticum aestivum GN=CYP71C7v3 PE...    33   7.4  
tr|A1IHG3|A1IHG3_TRIMO Cytochrome P450 OS=Triticum monococcum su...    33   7.4  
tr|Q5CS61|Q5CS61_CRYPV RRPp/PMC2 like exosome 3'-5' exoribonucle...    33   7.4  
tr|Q5CFZ7|Q5CFZ7_CRYHO Putative uncharacterized protein (Fragmen...    33   7.4  
tr|B2AN18|B2AN18_PODAN Predicted CDS Pa_6_8700 OS=Podospora anse...    33   7.4  
tr|Q12NM8|Q12NM8_SHEDO 2,3-dimethylmalate lyase OS=Shewanella de...    33   7.6  
tr|B1KGQ7|B1KGQ7_SHEWM Methylisocitrate lyase OS=Shewanella wood...    33   7.6  
tr|A8FV47|A8FV47_SHESH Methylisocitrate lyase OS=Shewanella sedi...    33   7.6  
tr|B6AF93|B6AF93_9CRYT Putative uncharacterized protein OS=Crypt...    33   9.7  

>tr|Q4S2D6|Q4S2D6_TETNG Chromosome 16 SCAF14763, whole genome shotgun
            sequence. (Fragment) OS=Tetraodon nigroviridis
            GN=GSTENG00025134001 PE=4 SV=1
          Length = 1216

 Score = 38.5 bits (88), Expect = 0.23
 Identities = 30/73 (41%), Positives = 38/73 (52%)
 Frame = -3

Query: 272  LPKVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIPAPLKKSDSCL 93
            LP   GIPP  +IDP L  + ++SLH  L   QPP I    +L    D PAP   S+S L
Sbjct: 863  LPLPPGIPPASSIDPRLSRA-QQSLHTPLPHAQPPTINPSASL----DAPAP-SSSNSSL 916

Query: 92   NSLGRVADILATV 54
                 ++ IL TV
Sbjct: 917  PDFELLSRILKTV 929


>tr|A5D102|A5D102_PELTS Type II secretory pathway, component ExeA
           OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
           JCM 10971 / SI) GN=ExeA PE=4 SV=1
          Length = 276

 Score = 37.7 bits (86), Expect = 0.39
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = -3

Query: 242 YTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIPAPLKKSDSCLNSLGRVADIL 63
           Y++     E IRE   +RL             L+  +  PA  +   +  N L R+ + L
Sbjct: 187 YSMRGLKAEEIREYCVSRL---------KYAGLHEEIFTPAAFEAIYAVTNGLPRLVNNL 237

Query: 62  ATVCIICCCFKSAEELDP 9
            T C+IC C K   E+DP
Sbjct: 238 VTTCLICACSKKQREIDP 255


>tr|A5CZH4|A5CZH4_PELTS Type II secretory pathway, component ExeA
           OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
           JCM 10971 / SI) GN=ExeA PE=4 SV=1
          Length = 267

 Score = 37.7 bits (86), Expect = 0.39
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = -3

Query: 242 YTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIPAPLKKSDSCLNSLGRVADIL 63
           Y++     E IRE   +RL             L+  +  PA  +   +  N L R+ + L
Sbjct: 187 YSMRGLKAEEIREYCVSRL---------KYAGLHEEIFTPAAFEAIYAVTNGLPRLVNNL 237

Query: 62  ATVCIICCCFKSAEELDP 9
            T C+IC C K   E+DP
Sbjct: 238 VTTCLICACSKKQREIDP 255


>tr|Q21ZE5|Q21ZE5_RHOFD Putative uncharacterized protein
           OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
           BAA-621 / T118) GN=Rfer_1117 PE=4 SV=1
          Length = 219

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -3

Query: 281 PNVLPKVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIP 123
           P V+PKV   PP Y   P +   +  +  A +    PP  P+ +A  PP D P
Sbjct: 78  PLVMPKVEAPPPPYVPPPDVTPQVSSNAPAIVSVATPPRAPAEIAPPPPPDTP 130


>tr|A2C806|A2C806_PROM3 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase OS=Prochlorococcus marinus (strain MIT
           9303) GN=dxr PE=4 SV=1
          Length = 412

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -3

Query: 233 DPTLVESIRESLHARLHAKQPPHIPSILALYPPVDIPAPLKKSDSCLNSLGRVADILATV 54
           D +L+  +++ L+A    +QPPH+P +LA    +++ A    +D  ++ +   A +L T+
Sbjct: 53  DASLLPQLKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTL 112

Query: 53  CII 45
             I
Sbjct: 113 AAI 115


>tr|Q2H247|Q2H247_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_04149 PE=4 SV=1
          Length = 734

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
 Frame = -3

Query: 482 LQVFMLVALYA-HHPYQQVQIYLSRILKIERLLLCQQSYLRMLLMSVLSGLKEGSVCQAS 306
           L++  LV +Y  HH  Q+  + L  I  I++ L      +R L +  +SG++   + Q  
Sbjct: 85  LEIKKLVYIYLIHHAEQEPDLALLSINTIQKSLSDTNPQVRALALRTMSGIRVPVISQIV 144

Query: 305 SHSL**NPPNVLPKVG-----GIPPLYTIDPTLVESIRESLHARLHAKQ 174
           S ++     ++ P V       +P  Y +DP+ +  + E L   L  KQ
Sbjct: 145 SLAIRKGAGDMSPYVRRAAALAVPKCYRLDPSQLPQLLEYLSTLLGDKQ 193


>tr|Q90050|Q90050_FHV1 Herpes simplex virus glycoprotein B (GB)
           homolog OS=Feline herpesvirus 1 GN=glycoprotein B
           homolog PE=4 SV=1
          Length = 948

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
 Frame = -3

Query: 269 PKVGGIPPLYTIDPTLVESIRESLHA---------RLHAKQPPHIPSILALYPPVDIP 123
           P+VGG PP  T DPT +  +RE+L A           +   PP   +++ L PP   P
Sbjct: 89  PEVGGTPPKPTTDPTDMSDMREALRASQIEANGPSTFYMCPPPSGSTVVRLEPPRACP 146


>tr|Q8S9E8|Q8S9E8_WHEAT P450 OS=Triticum aestivum GN=CYP71C7v2 PE=2
           SV=1
          Length = 527

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -3

Query: 275 VLPKVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDI 126
           +L ++G +P L+   P+  E++  + H ++ A +PP + + +  Y P DI
Sbjct: 91  LLLRIGAVPTLFVSSPSAAEAVLRT-HDQIFASRPPSMAANIIRYGPTDI 139


>tr|Q8GZU7|Q8GZU7_WHEAT Cytochrome P450 OS=Triticum aestivum PE=2
           SV=1
          Length = 527

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -3

Query: 275 VLPKVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDI 126
           +L ++G +P L+   P+  E++  + H ++ A +PP + + +  Y P DI
Sbjct: 91  LLLRIGAVPTLFVSSPSAAEAVLRT-HDQIFASRPPSMAADIIRYGPTDI 139


>tr|Q58A33|Q58A33_WHEAT P450 OS=Triticum aestivum GN=CYP71C7v1 PE=2
           SV=1
          Length = 527

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -3

Query: 275 VLPKVGGIPPLYTIDPTLVESIRESLHARLHAKQPPHIPSILALYPPVDI 126
           +L ++G +P L+   P+  E++  + H ++ A +PP + + +  Y P DI
Sbjct: 91  LLLRIGAVPTLFVSSPSAAEAVLRT-HDQIFASRPPSMAADIIRYGPTDI 139