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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915591
Clone id YMU001_000073_D08
Library
Length 326
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGGAAGAATTCGCGGCCTTGACACATATTGTAAGCAAAATAATTGCAAATCCATAGG
AGTAAGGAACATGCAATGCCTGCAAACCGGCCTTTAAGACCTTGAGAATGCCTTCAAGTC
TATCTGTAAGTCCACTTAGCCAATCCCGATTCGTTGTCTGCACGGTGTCAGCCACTGAGG
CATCAGTAGAAACTGCAGCATCTGCAATGGTGTAAAGGAGGCCCTCAGCTTTTTCAACAA
GCTGGGGCAGACCTGTGGAAATGAATTCTGAGGTTGCCTCTATGTGACTATCAAATTCTG
CAAAGCTAGCCCGAACTGCAAGCATC
■■Homology search results ■■ -
sp_hit_id Q9FYL3
Definition sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana
Align length 76
Score (bit) 66.6
E-value 4.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915591|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D08.
         (306 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=A...    67   4e-11
sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic O...    63   5e-10
sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplast...    59   8e-09
sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like protein 1, chl...    50   3e-06
sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like protein 2, chl...    39   0.006
sp|P36165|TGL4_YEAST Lipase 4 OS=Saccharomyces cerevisiae GN=TGL...    30   2.9  

>sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic
           OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3
          Length = 499

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = -2

Query: 215 EKAEGLLYTIXXXXXXXXXXXXXXVQTTNR-----DWLSGLTDRLEGILKVLKAGLQALH 51
           + AE LLYTI                TT +     DW SG+ + +E ILKVLK GL  +H
Sbjct: 60  DHAENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVH 119

Query: 50  VPYSYGFAIILLTICV 3
           VPYSYGFAIILLT+ V
Sbjct: 120 VPYSYGFAIILLTVLV 135


>sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic
           OS=Pisum sativum GN=PPF-1 PE=2 SV=2
          Length = 442

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -2

Query: 239 STGLPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTT-NRDWLSGLTDRLEGILKVLKAGL 63
           S  L  +  +AEGLLYT+              V    N  W   ++D +E +LKVLK GL
Sbjct: 50  SVDLSGIFARAEGLLYTLADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGL 109

Query: 62  QALHVPYSYGFAIILLTICV 3
            ++HVPYSYGFAIILLT+ V
Sbjct: 110 SSVHVPYSYGFAIILLTVIV 129


>sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic
           OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2
          Length = 462

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = -2

Query: 239 STGLPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTT---NRDWLSGLTDRLEGILKVLKA 69
           S  +  +  +AE LLYTI                +    +  W   ++D +E +LK+LK 
Sbjct: 70  SVDIGAIFTRAESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKD 129

Query: 68  GLQALHVPYSYGFAIILLTICV 3
           GL A+HVPY+YGFAIILLTI V
Sbjct: 130 GLSAVHVPYAYGFAIILLTIIV 151


>sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like protein 1,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1
           PE=3 SV=1
          Length = 495

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = -2

Query: 122 WLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           W++ + D LE +L  L+ GL  LHVPYSYG++IILLT+ V
Sbjct: 113 WVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIV 152


>sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like protein 2,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2
           PE=2 SV=1
          Length = 422

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -2

Query: 110 LTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           L    E +L+ L  GL++  +PYSYGFAII LT+ V
Sbjct: 77  LAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLV 112


>sp|P36165|TGL4_YEAST Lipase 4 OS=Saccharomyces cerevisiae GN=TGL4
           PE=1 SV=1
          Length = 910

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 185 QWCKGGPQLFQQAGADLWK*ILRLPLCDYQILQ 283
           +WC  G +L    G   WK  L  PL DY++++
Sbjct: 160 EWCSAGARLDDLTGKTEWKQKLESPLYDYKLIK 192
tr_hit_id B8LKE4
Definition tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 76
Score (bit) 72.0
E-value 1.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915591|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_D08.
         (306 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea...    72   1e-11
tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea...    72   1e-11
tr|Q0WVR0|Q0WVR0_ARATH Putative uncharacterized protein At1g2450...    67   6e-10
tr|Q75LC5|Q75LC5_ORYSJ Putative inner membrane protein (With alt...    66   1e-09
tr|Q75LC4|Q75LC4_ORYSJ Putative inner membrane protein (With alt...    66   1e-09
tr|Q10AQ5|Q10AQ5_ORYSJ ARTEMIS protein, chloroplast, putative, e...    66   1e-09
tr|Q0DLV1|Q0DLV1_ORYSJ Os03g0844700 protein OS=Oryza sativa subs...    66   1e-09
tr|A2XNZ3|A2XNZ3_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A7P455|A7P455_VITVI Chromosome chr1 scaffold_5, whole genome ...    65   1e-09
tr|B6TRE2|B6TRE2_MAIZE Inner membrane protein ALBINO3 OS=Zea may...    64   5e-09
tr|A7XUJ9|A7XUJ9_PONTR Chloroplast PPF-1 OS=Poncirus trifoliata ...    61   2e-08
tr|B4FSN2|B4FSN2_MAIZE Putative uncharacterized protein OS=Zea m...    59   9e-08
tr|B6UBJ7|B6UBJ7_MAIZE Inner membrane protein ALBINO3 OS=Zea may...    59   1e-07
tr|B3H4X4|B3H4X4_ARATH Uncharacterized protein At2g28800.3 OS=Ar...    59   1e-07
tr|A7NZ37|A7NZ37_VITVI Chromosome chr6 scaffold_3, whole genome ...    59   2e-07
tr|Q5ZEK1|Q5ZEK1_ORYSJ Putative PPF-1 protein (Os01g0151200 prot...    58   2e-07
tr|B8ADB5|B8ADB5_ORYSI Putative uncharacterized protein OS=Oryza...    58   2e-07
tr|A2ZPB5|A2ZPB5_ORYSJ Putative uncharacterized protein OS=Oryza...    58   2e-07
tr|Q5G2X9|Q5G2X9_GONPE Albino3-like protein OS=Gonium pectorale ...    52   2e-05
tr|A9TBG1|A9TBG1_PHYPA Predicted protein (Fragment) OS=Physcomit...    52   2e-05
tr|A8HYK7|A8HYK7_CHLRE Inner membrane ALBINO3-like protein 1 OS=...    50   4e-05
tr|A9TZ57|A9TZ57_PHYPA Predicted protein (Fragment) OS=Physcomit...    47   6e-04
tr|A5AUT8|A5AUT8_VITVI Putative uncharacterized protein OS=Vitis...    47   6e-04
tr|Q01CT0|Q01CT0_OSTTA Putative PPF-1 protein (ISS) OS=Ostreococ...    41   0.026
tr|A4RX67|A4RX67_OSTLU Oxa1 family transporter: 60 KD inner memb...    41   0.035
tr|A4RUA3|A4RUA3_OSTLU Oxa1 family transporter: 60 KD inner memb...    40   0.077
tr|B6Y5I2|B6Y5I2_ANATH 60 kDa inner membrane insertion protein O...    37   0.50 
tr|A4XN53|A4XN53_CALS8 60 kDa inner membrane insertion protein O...    35   1.9  
tr|Q019Q7|Q019Q7_OSTTA Chloroplast membrane protein (ISS) OS=Ost...    35   1.9  
tr|A0C1A9|A0C1A9_PARTE Chromosome undetermined scaffold_141, who...    35   2.5  

>tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 471

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 38/76 (50%), Positives = 46/76 (60%)
 Frame = -2

Query: 230 LPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTTNRDWLSGLTDRLEGILKVLKAGLQALH 51
           +P+LV +AEGLLYT+               Q TN  W   + D LEG LKVLK GL  +H
Sbjct: 65  IPRLVSRAEGLLYTLADAAVATSDSVAPA-QKTNGSWFGFIADGLEGFLKVLKDGLTTVH 123

Query: 50  VPYSYGFAIILLTICV 3
           VPY+YGFAII LT+ V
Sbjct: 124 VPYAYGFAIITLTVLV 139


>tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 471

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 38/76 (50%), Positives = 46/76 (60%)
 Frame = -2

Query: 230 LPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTTNRDWLSGLTDRLEGILKVLKAGLQALH 51
           +P+LV +AEGLLYT+               Q TN  W   + D LEG LKVLK GL  +H
Sbjct: 65  IPRLVSRAEGLLYTLADAAVATSDSVAPA-QKTNGSWFGFIADGLEGFLKVLKDGLTTVH 123

Query: 50  VPYSYGFAIILLTICV 3
           VPY+YGFAII LT+ V
Sbjct: 124 VPYAYGFAIITLTVLV 139


>tr|Q0WVR0|Q0WVR0_ARATH Putative uncharacterized protein At1g24500
           OS=Arabidopsis thaliana GN=At1g24500 PE=2 SV=1
          Length = 302

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = -2

Query: 215 EKAEGLLYTIXXXXXXXXXXXXXXVQTTNR-----DWLSGLTDRLEGILKVLKAGLQALH 51
           + AE LLYTI                TT +     DW SG+ + +E ILKVLK GL  +H
Sbjct: 60  DHAENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVH 119

Query: 50  VPYSYGFAIILLTICV 3
           VPYSYGFAIILLT+ V
Sbjct: 120 VPYSYGFAIILLTVLV 135


>tr|Q75LC5|Q75LC5_ORYSJ Putative inner membrane protein (With
           alternative splicing) (ARTEMIS protein, chloroplast,
           putative, expressed) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0032G11.18 PE=3 SV=1
          Length = 489

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL ALHVPY YGFAIILLT+ V
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLV 138


>tr|Q75LC4|Q75LC4_ORYSJ Putative inner membrane protein (With
           alternative splicing) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0032G11.18 PE=3 SV=1
          Length = 185

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL ALHVPY YGFAIILLT+ V
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLV 138


>tr|Q10AQ5|Q10AQ5_ORYSJ ARTEMIS protein, chloroplast, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g62750 PE=3 SV=1
          Length = 510

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL ALHVPY YGFAIILLT+ V
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLV 138


>tr|Q0DLV1|Q0DLV1_ORYSJ Os03g0844700 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0844700 PE=3 SV=1
          Length = 523

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL ALHVPY YGFAIILLT+ V
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLV 138


>tr|A2XNZ3|A2XNZ3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14293 PE=3 SV=1
          Length = 533

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL ALHVPY YGFAIILLT+ V
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLV 138


>tr|A7P455|A7P455_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030703001
           PE=3 SV=1
          Length = 393

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = -2

Query: 125 DWLSGLTDRLEGILKVLKAGLQALHVPYSYGFAIILLTICV 3
           DWLSG+T+ +E +LKVLK GL  LHVPY+YGFAIILLT+ V
Sbjct: 90  DWLSGITNYMETVLKVLKGGLSTLHVPYAYGFAIILLTVLV 130


>tr|B6TRE2|B6TRE2_MAIZE Inner membrane protein ALBINO3 OS=Zea mays
           PE=2 SV=1
          Length = 449

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
 Frame = -2

Query: 239 STGLPQL---VEKAEGLLYTIXXXXXXXXXXXXXXVQTT----NRDWLSGLTDRLEGILK 81
           S G P L   +E+AE  LYT+               Q      N  W   +++ LE +LK
Sbjct: 56  SVGGPHLQAALERAEAALYTLADAAVAAAGAGADAGQAAAVQKNSGWFGFISEALEVVLK 115

Query: 80  VLKAGLQALHVPYSYGFAIILLTICV 3
           VLK GL A+HVPYSYGFAIILLTI V
Sbjct: 116 VLKDGLSAVHVPYSYGFAIILLTIIV 141