BP915601 |
Clone id |
YMU001_000073_E06 |
Library |
YMU01 |
Length |
422 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000073_E06. |
Accession |
BP915601 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL417Contig1 |
Sequence |
AATGTGAGGGAATATGGCCTTATGGTGATCTAGAGCCCCTACGATGTCCAGGCCTCTTGG ACCTGCATCAAATTCGACAGCCACTCCAAGCCATTTTCCGTTTTTTGCAAAAGAGACTTT CGCTTTGGATGGATTATCTAAATCAACTGCACACATGATTATATCTCCAACACCAAAGAC GCCTCCATAACCAGTGAAATCTCCACCATGTGAAAACTTCCCGGTTCCTCCATAGCCAAA ACTAGTGCTGCTTTCACCAAGACTGCCAACATCACTGTCACCTCTAGACAGACCCACTCT ACAAAGGTTTTGCTGATCCTTGGCAGTATCCTCCATGATTACTTGCTGATTCTCAATCAC TCGACATCCAAAACAGTACTTGCCTCCCTTCACACCAAAAGTTGCTCGTGCACCTGACCA GC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VDM6 |
Definition |
sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus |
Align length |
140 |
Score (bit) |
79.7 |
E-value |
4.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XQR8 |
Definition |
tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica |
Align length |
145 |
Score (bit) |
159.0 |
E-value |
8.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915601|Adiantum capillus-veneris mRNA, clone: YMU001_000073_E06. (422 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa ... 159 8e-38 tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0... 159 8e-38 tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subs... 159 8e-38 tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza... 159 8e-38 tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, who... 157 2e-37 tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis... 157 2e-37 tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U... 152 1e-35 tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U... 152 1e-35 tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U... 83 6e-15 tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio ... 83 6e-15 tr|B7P318|B7P318_IXOSC E1b-55kD-associated protein, putative (Fr... 82 1e-14 tr|B6KKR9|B6KKR9_TOXGO SPRY domain-containing protein OS=Toxopla... 80 5e-14 tr|A4FUC2|A4FUC2_BOVIN HNRNPUL1 protein OS=Bos taurus GN=HNRNPUL... 80 7e-14 tr|B7Z4B8|B7Z4B8_HUMAN cDNA FLJ56481, highly similar to Heteroge... 80 7e-14 tr|B3KMW7|B3KMW7_HUMAN cDNA FLJ12801 fis, clone NT2RP2002099, hi... 80 7e-14 tr|A8K5K0|A8K5K0_HUMAN cDNA FLJ78309, highly similar to Homo sap... 80 7e-14 tr|A8K3W4|A8K3W4_HUMAN cDNA FLJ75163, highly similar to Homo sap... 80 7e-14 tr|A8K6U7|A8K6U7_HUMAN cDNA FLJ78252, highly similar to Homo sap... 77 6e-13 tr|A7SN18|A7SN18_NEMVE Predicted protein (Fragment) OS=Nematoste... 75 1e-12 tr|A7ST89|A7ST89_NEMVE Predicted protein (Fragment) OS=Nematoste... 73 6e-12 tr|A7SFI0|A7SFI0_NEMVE Predicted protein (Fragment) OS=Nematoste... 73 6e-12 tr|Q28Z53|Q28Z53_DROPS GA24297 OS=Drosophila pseudoobscura pseud... 73 8e-12 tr|B4GI97|B4GI97_DROPE GL16796 OS=Drosophila persimilis GN=GL167... 73 8e-12 tr|B3MDS7|B3MDS7_DROAN GF11942 OS=Drosophila ananassae GN=GF1194... 72 1e-11 tr|Q4RFS1|Q4RFS1_TETNG Chromosome 16 SCAF15113, whole genome sho... 72 1e-11 tr|B4P4B5|B4P4B5_DROYA GE13899 OS=Drosophila yakuba GN=GE13899 P... 68 3e-10 tr|B6M8E1|B6M8E1_BRAFL Putative uncharacterized protein OS=Branc... 67 3e-10 tr|B6M8C5|B6M8C5_BRAFL Putative uncharacterized protein OS=Branc... 67 4e-10 tr|B4MQN2|B4MQN2_DROWI GK21907 OS=Drosophila willistoni GN=GK219... 66 1e-09 tr|B3SC93|B3SC93_TRIAD Putative uncharacterized protein OS=Trich... 66 1e-09
>tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0043L09.29 PE=4 SV=2 Length = 717
Score = 159 bits (401), Expect = 8e-38 Identities = 78/145 (53%), Positives = 99/145 (68%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ Sbjct: 67 WSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGH 126
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + F++NG+WLG+A FDA Sbjct: 127 SFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDA 186
Query: 63 GPRGLDI----VGALDHHKAIFPHI 1 +GL + V ++ AIFPH+ Sbjct: 187 SDKGLGLVESPVSSMQWESAIFPHV 211
>tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0410G08.12 PE=4 SV=1 Length = 717
Score = 159 bits (401), Expect = 8e-38 Identities = 78/145 (53%), Positives = 99/145 (68%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ Sbjct: 67 WSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGH 126
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + F++NG+WLG+A FDA Sbjct: 127 SFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDA 186
Query: 63 GPRGLDI----VGALDHHKAIFPHI 1 +GL + V ++ AIFPH+ Sbjct: 187 SDKGLGLVESPVSSMQWESAIFPHV 211
>tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subsp. japonica GN=Os04g0636000 PE=4 SV=1 Length = 717
Score = 159 bits (401), Expect = 8e-38 Identities = 78/145 (53%), Positives = 99/145 (68%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ Sbjct: 67 WSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGH 126
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + F++NG+WLG+A FDA Sbjct: 127 SFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDA 186
Query: 63 GPRGLDI----VGALDHHKAIFPHI 1 +GL + V ++ AIFPH+ Sbjct: 187 SDKGLGLVESPVSSMQWESAIFPHV 211
>tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015603 PE=4 SV=1 Length = 745
Score = 159 bits (401), Expect = 8e-38 Identities = 78/145 (53%), Positives = 99/145 (68%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ Sbjct: 95 WSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGH 154
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + F++NG+WLG+A FDA Sbjct: 155 SFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDA 214
Query: 63 GPRGLDI----VGALDHHKAIFPHI 1 +GL + V ++ AIFPH+ Sbjct: 215 SDKGLGLVESPVSSMQWESAIFPHV 239
>tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009742001 PE=4 SV=1 Length = 489
Score = 157 bits (398), Expect = 2e-37 Identities = 77/144 (53%), Positives = 97/144 (67%), Gaps = 4/144 (2%) Frame = -3
Query: 420 WSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTS 241 WSGAR G+ GGKYCFGC++I Q V MEDT DQQ++CR+G+SRGD VG+LGE+ S Sbjct: 67 WSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHS 126
Query: 240 FGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDAG 61 FG+GGTGKFS D I+CAV+L+ A +SF+KNGKWLGVA EFDAG Sbjct: 127 FGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAG 186
Query: 60 PRGLDIVGA----LDHHKAIFPHI 1 +GL +V + L A+FPH+ Sbjct: 187 VKGLGVVDSPMRQLHWESALFPHV 210
>tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016567 PE=4 SV=1 Length = 1021
Score = 157 bits (398), Expect = 2e-37 Identities = 77/144 (53%), Positives = 97/144 (67%), Gaps = 4/144 (2%) Frame = -3
Query: 420 WSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTS 241 WSGAR G+ GGKYCFGC++I Q V MEDT DQQ++CR+G+SRGD VG+LGE+ S Sbjct: 234 WSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHS 293
Query: 240 FGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDAG 61 FG+GGTGKFS D I+CAV+L+ A +SF+KNGKWLGVA EFDAG Sbjct: 294 FGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAG 353
Query: 60 PRGLDIVGA----LDHHKAIFPHI 1 +GL +V + L A+FPH+ Sbjct: 354 VKGLGVVDSPMRQLHWESALFPHV 377
>tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 625
Score = 152 bits (383), Expect = 1e-35 Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT G +GG +YCFGCR++ Q V M+ T +++LCR+G+SRGD VG+LGES Sbjct: 65 WSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQH 124
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + FA+NG+WLG+A FDA Sbjct: 125 SFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGIARHFDA 184
Query: 63 GPRGLDIVGA----LDHHKAIFPHI 1 G +GL +V A + A+FPH+ Sbjct: 185 GEKGLGLVDAPLRPMRWGSALFPHV 209
>tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 663
Score = 152 bits (383), Expect = 1e-35 Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 5/145 (3%) Frame = -3
Query: 420 WSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESST 244 WSGARAT G +GG +YCFGCR++ Q V M+ T +++LCR+G+SRGD VG+LGES Sbjct: 65 WSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQH 124
Query: 243 SFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDA 64 SFG+GGTGKFSH D ++CAVDLD+ A + FA+NG+WLG+A FDA Sbjct: 125 SFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGIARHFDA 184
Query: 63 GPRGLDIVGA----LDHHKAIFPHI 1 G +GL +V A + A+FPH+ Sbjct: 185 GEKGLGLVDAPLRPMRWGSALFPHV 209
>tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U-like 1 OS=Danio rerio GN=hnrnpul1 PE=2 SV=1 Length = 784
Score = 83.2 bits (204), Expect = 6e-15 Identities = 52/140 (37%), Positives = 75/140 (53%) Frame = -3
Query: 420 WSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTS 241 WSGARAT+GV G+ C+ +V E V +++ ++ RVG S DS LGE + S Sbjct: 233 WSGARATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVRVGWSL-DSCSTQLGEEAFS 291
Query: 240 FGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDAG 61 +GYGGTGK S DII C +D D+ + +++F+KNGKWL VA Sbjct: 292 YGYGGTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVEMAFSKNGKWLDVAFRVSKE 351
Query: 60 PRGLDIVGALDHHKAIFPHI 1 ++ G +A+FPH+ Sbjct: 352 ----ELAG-----QALFPHV 362
>tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio GN=hnrnpul1 PE=1 SV=1 Length = 784
Score = 83.2 bits (204), Expect = 6e-15 Identities = 52/140 (37%), Positives = 75/140 (53%) Frame = -3
Query: 420 WSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTS 241 WSGARAT+GV G+ C+ +V E V +++ ++ RVG S DS LGE + S Sbjct: 233 WSGARATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVRVGWSL-DSCSTQLGEEAFS 291
Query: 240 FGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAKVSFAKNGKWLGVAVEFDAG 61 +GYGGTGK S DII C +D D+ + +++F+KNGKWL VA Sbjct: 292 YGYGGTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVEMAFSKNGKWLDVAFRVSKE 351
Query: 60 PRGLDIVGALDHHKAIFPHI 1 ++ G +A+FPH+ Sbjct: 352 ----ELAG-----QALFPHV 362
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