BP915602
Clone id YMU001_000073_E07
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCTGTCTTTTCCTCCCTCCAACCTTCCATCTCCGCTTTCCACTCCATCTCTTTTTCCATC
TCTATAAATCGCTTGTGTGTGAGCATGAATGTCGCCTTCAACGTCTTGGGGAGAGTCCAC
GCAAGACACGGAGTGGCGGATTCAAAGGGCTGGCACCACAAAATGGGGTTGTCTGTACAA
TTGCCATGTCAGCAAGGGAACGTTTACGCAAAACACAGGCAAATCCGTAGAACTTAACCA
CGTCATCAATTTACGCAAATCTGGGAGTCATTGGCTTTTAGGGTTTAAGCCCCTCATCCA
TAATATGCAAGTAGGTCAATTCCTTGTGTTTTAGGCCTCTCGGCCAAGTCTTCTAAGTTT
ATCAGGGTTTAGGGTTAAAAACCGTAAAGTATCTGGTATCTGCAGCCACATCAGCAACTT
GTAAGAGGGAGCATTGATATATCAAGCTCAAAATATGGTTTGCATGAATGAATTCTCGCT
TATATTTATCATTGGCACAAGGTAGCCGACAACGATCATCGCCAATGATACTACAGCTCG
A
■■Homology search results ■■ -
sp_hit_id Q8R3Y8
Definition sp|Q8R3Y8|I2BP1_MOUSE Interferon regulatory factor 2-binding protein 1 OS=Mus musculus
Align length 49
Score (bit) 33.9
E-value 0.53
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915602|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_E07.
(541 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8R3Y8|I2BP1_MOUSE Interferon regulatory factor 2-binding pro... 34 0.53
sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding pro... 34 0.53
sp|P05885|ENV_SIVM1 Envelope glycoprotein gp160 OS=Simian immuno... 30 9.9
sp|A4WJK5|DAPA_PYRAR Dihydrodipicolinate synthase OS=Pyrobaculum... 30 9.9

>sp|Q8R3Y8|I2BP1_MOUSE Interferon regulatory factor 2-binding
protein 1 OS=Mus musculus GN=Irf2bp1 PE=2 SV=2
Length = 584

Score = 33.9 bits (76), Expect = 0.53
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1

Query: 76 CVSMNVAFN----VLGRVHARHGVADSKGWHHKMGLSVQLPCQQGNVYA 210
C NV F ++GRV A A G+ ++ L + PC GNVYA
Sbjct: 239 CAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYA 287


>sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding
protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1
Length = 584

Score = 33.9 bits (76), Expect = 0.53
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1

Query: 76 CVSMNVAFN----VLGRVHARHGVADSKGWHHKMGLSVQLPCQQGNVYA 210
C NV F ++GRV A A G+ ++ L + PC GNVYA
Sbjct: 239 CAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYA 287


>sp|P05885|ENV_SIVM1 Envelope glycoprotein gp160 OS=Simian
immunodeficiency virus (isolate Mm142-83) GN=env PE=3
SV=1
Length = 882

Score = 29.6 bits (65), Expect = 9.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2

Query: 137 RIQRAGTTKWGCLYNCHVSKGTFTQNTGKSVELNHVIN 250
R ++ T KWG + + T T T KSVE ++N
Sbjct: 112 RCNKSETDKWGLTKSSTTTASTTTTTTAKSVETRDIVN 149


>sp|A4WJK5|DAPA_PYRAR Dihydrodipicolinate synthase OS=Pyrobaculum
arsenaticum (strain DSM 13514 / JCM 11321) GN=dapA PE=3
SV=1
Length = 301

Score = 29.6 bits (65), Expect = 9.9
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = -2

Query: 237 LSSTDLPVFCVNVPLLTWQLYRQPHFVVPAL*IRHSVSCVDSPQDVEGDIHAHTQAIYRD 58
L TD+PV +PL T Y P V + + S V +D GD H IY
Sbjct: 123 LDKTDVPVILYTIPLATG--YNIPVEVFEL--VANEYSQVVGVKDSSGDFRYHLDLIYLL 178

Query: 57 GKRDGVESG 31
G+R V G
Sbjct: 179 GRRLSVLQG 187


tr_hit_id B2RCD8
Definition tr|B2RCD8|B2RCD8_HUMAN cDNA, FLJ96012, highly similar to Homo sapiens interferon regulatory factor 2 binding protein 1 (IRF2BP1), mRNA OS=Homo sapiens
Align length 49
Score (bit) 33.9
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915602|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_E07.
(541 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2RCD8|B2RCD8_HUMAN cDNA, FLJ96012, highly similar to Homo sa... 34 5.7

>tr|B2RCD8|B2RCD8_HUMAN cDNA, FLJ96012, highly similar to Homo
sapiens interferon regulatory factor 2 binding protein 1
(IRF2BP1), mRNA OS=Homo sapiens PE=2 SV=1
Length = 584

Score = 33.9 bits (76), Expect = 5.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1

Query: 76 CVSMNVAFN----VLGRVHARHGVADSKGWHHKMGLSVQLPCQQGNVYA 210
C NV F ++GRV A A G+ ++ L + PC GNVYA
Sbjct: 239 CAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYA 287