BP915606
Clone id YMU001_000073_E11
Library
Length 476
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGTGCAGATCATGTAGGAGATCTTGCAGACTTGCCATTTATTGACGCCTCCACCTGCGTA
GATTTCTATATAAGGAGGTGAGGGTTGCTTTGGTCCCTCACTTAGCCTTGTTTTTGCGTT
TTGTGTGTATGTGAAAGTGAGGAGAGAGGTATTTCTCTACGCCTGCTTATTGTGGAGGTA
TGGAGTTGGTTGAACATGGTGTGGCTCCTCAGGTCGATAAACTGCCAAAATGGCTTTGTT
CTGCAAAATTATATTATGGTCCTTTTTTTGTACTCTACACTGGCCCAAAAAGAATGGGGC
TTAGTTTTTGGATGATATACCATTGATGACTTTGCATAGTAGGTTGGTTTGTTGGCGCAT
GTACGCTGTCTGCATCATACTGTTCGAAACACTGATTTTTTACACATACAATAAACAGTC
GTTTCTTTTGTATCATGTTGGACTTGTTAATGTGGTTATCTCATGGGAGTAATATG
■■Homology search results ■■ -
sp_hit_id Q54BC9
Definition sp|Q54BC9|DYRK2_DICDI Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum
Align length 68
Score (bit) 31.2
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915606|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_E11.
(476 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54BC9|DYRK2_DICDI Probable serine/threonine-protein kinase d... 31 2.5
sp|Q5WJ82|PUR9_BACSK Bifunctional purine biosynthesis protein pu... 30 5.5
sp|Q97CR8|PYRG_THEVO CTP synthase OS=Thermoplasma volcanium GN=p... 30 7.2

>sp|Q54BC9|DYRK2_DICDI Probable serine/threonine-protein kinase
dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1
Length = 915

Score = 31.2 bits (69), Expect = 2.5
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -3

Query: 336 CKVINGISSKN*APFFLGQCRVQKKDHNIILQNKAILAVYRPEEPHHVQPTPYLHNKQA* 157
C+V+ G K L R QK+ HN L IL + +P+ +L+N
Sbjct: 617 CQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYF 676

Query: 156 RNTSLLTF 133
RN +LTF
Sbjct: 677 RNHLILTF 684


>sp|Q5WJ82|PUR9_BACSK Bifunctional purine biosynthesis protein purH
OS=Bacillus clausii (strain KSM-K16) GN=purH PE=3 SV=1
Length = 511

Score = 30.0 bits (66), Expect = 5.5
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3

Query: 264 KDHNIILQNKAILAVYRPEEPHHVQPTPYLHNKQA*RNTSLLTFTYTQNAKTRLSEGPKQ 85
K+ + L+ K V+R + YL + N LT TYT R E P Q
Sbjct: 162 KEEQLALRQKLAAKVFRHTAAYDAMIGSYLTDAVGEENPESLTVTYTHKQTLRYGENPHQ 221

Query: 84 PSPPY 70
+ Y
Sbjct: 222 KAAFY 226


>sp|Q97CR8|PYRG_THEVO CTP synthase OS=Thermoplasma volcanium GN=pyrG
PE=3 SV=1
Length = 540

Score = 29.6 bits (65), Expect = 7.2
Identities = 19/90 (21%), Positives = 42/90 (46%)
Frame = -3

Query: 297 PFFLGQCRVQKKDHNIILQNKAILAVYRPEEPHHVQPTPYLHNKQA*RNTSLLTFTYTQN 118
PF +++++++N+I + ++ P E +PT H+ +A R +
Sbjct: 152 PFLEAVRQLKREENNVIFAHVTLVPEIGPTEEQKTKPTQ--HSVKALREIGIQPDIIFAR 209

Query: 117 AKTRLSEGPKQPSPPYIEIYAGGGVNKWQV 28
+K RL E K+ + ++ GG ++ + V
Sbjct: 210 SKNRLLEETKKRISLFTDVPEGGIISVYDV 239


tr_hit_id Q7XYP1
Definition tr|Q7XYP1|Q7XYP1_BIGNA Ribosomal protein rpL11 OS=Bigelowiella natans
Align length 71
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915606|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_E11.
(476 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XYP1|Q7XYP1_BIGNA Ribosomal protein rpL11 OS=Bigelowiella n... 35 2.4
tr|A8Q5W4|A8Q5W4_BRUMA LIM domain containing protein OS=Brugia m... 33 7.1
tr|B1DDJ7|B1DDJ7_9BACL Cystathionine gamma-synthase OS=Paenibaci... 33 9.2
tr|Q17DV8|Q17DV8_AEDAE Glucose dehydrogenase OS=Aedes aegypti GN... 33 9.2
tr|A8XN63|A8XN63_CAEBR Putative uncharacterized protein OS=Caeno... 33 9.2

>tr|Q7XYP1|Q7XYP1_BIGNA Ribosomal protein rpL11 OS=Bigelowiella
natans PE=2 SV=1
Length = 235

Score = 34.7 bits (78), Expect = 2.4
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3

Query: 219 YRPEEPHHVQPTPYLHNKQA*-----RNTSLLTFTYTQNAKTRLSEGPKQPSPPYIEIYA 55
YRP P+H P +H A RNT + TQ K L G P+PP
Sbjct: 65 YRPH-PYHA---PVMHEASARAFRLGRNTMVNAAKVTQIIKLALDAGKANPAPPVGPALG 120

Query: 54 GGGVNKWQVCK 22
GVN Q CK
Sbjct: 121 AAGVNIMQFCK 131


>tr|A8Q5W4|A8Q5W4_BRUMA LIM domain containing protein OS=Brugia
malayi GN=Bm1_43575 PE=4 SV=1
Length = 1596

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1

Query: 311 PKTKPHSFWASVEYKKRTII*FCRTKPFWQFIDLRSHTMFNQLHTSTISRRREIPLSSLS 132
P K H+ W +V R I + F T+ N + TSTIS +R+ S
Sbjct: 577 PPCKNHAEWVNVSTDARVIYISSIVEAFKSDSQRMRETLMNAIRTSTISHKRKTRQVDTS 636

Query: 131 HTHKTQ 114
T KT+
Sbjct: 637 RTKKTE 642


>tr|B1DDJ7|B1DDJ7_9BACL Cystathionine gamma-synthase
OS=Paenibacillus sp. JDR-2 GN=Pjdr2DRAFT_3198 PE=3 SV=1
Length = 386

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3

Query: 255 NIILQNKAILAVYRPEEPHHVQPTPYLHNKQA*RNTSLLTF 133
N +L+++AI VY P PHH P + NKQ+ NT + +F
Sbjct: 261 NFLLEHEAIEDVYYPALPHH--PGHDVQNKQSSGNTGIFSF 299


>tr|Q17DV8|Q17DV8_AEDAE Glucose dehydrogenase OS=Aedes aegypti
GN=AAEL004014 PE=3 SV=1
Length = 704

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3

Query: 156 STPAYCGGMELVEHGVAPQVDKLPKWLCSAKLYYGPFFVLYTGPKRMGLSF 308
S P Y G + P K+ K A L G +V Y GPK++G+SF
Sbjct: 272 SYPGYAGKNGPLAVSYVPYKSKISKLFLEASLQAGIPYVDYNGPKQVGISF 322


>tr|A8XN63|A8XN63_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG16067 PE=4 SV=2
Length = 227

Score = 32.7 bits (73), Expect = 9.2
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3

Query: 180 MELVEHGVAPQVDKLPKWLCSAKLYYGPFFVLYTGPKRMGLSFWMIYH**LCIVGWFVGA 359
+ + E+GV P V KLP LC K+ + + TG + W+ Y C + W V
Sbjct: 9 LHINENGVYPVVKKLPSPLCCFKVMH-----IRTG------TLWIAY----CEIMWIVSQ 53

Query: 360 CTL-SASYCSKH*FFTHTI--NSRFFCIMLDLLMWLSHG 467
C+ +A + F + I F CI L L+ +L G
Sbjct: 54 CSFWTAESIVREAFPPYVIIAGFTFTCIQLVLVFFLIQG 92