BP915615 [AcEST]

BP915615
Clone id	YMU001_000073_F08
Library	YMU01
Length	475
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000073_F08.
Accession	BP915615
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3512Contig1
Sequence	ATACTCCAACTGATTATTTTGAGAAGGTAGGTGAAATCATTCTTAGGTGTATGCATGCAT GTAACATGTGAAAGGATGTGGGATTGGTAGTAGATAGGAATATAGGACTTAGTGGTTTGC GCTTGCATCTAGACAGACCATTCTGCATCTTATCAAGGATAGAATAGCTTTGCTGCAAAT TTGAACGCAGGAGAGTGGATTAGTTAAGCAAGACATCATGGCAATCCCAAAGCCGCCTAA AGGAAGTTTCAGTACTTGCTTGTCATGTGATTTGACATTGGTTCAGGAAAATGTTAGACC AGATAAGCTATGGCTCTAAATGGAATGGATTATTAAATCTGTGCCATCCTACTTATGACA CATCTCTGCACAGGACAAACCCCCAACACTTTTTACCGGAAAAAGACATAATTTTAGAGT CATTCTTTGCAAGAAAACTCAATCTACTTTTTCATAGGACGCTTTAAAGCGACGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O95561
Definition	sp\|O95561\|CA105_HUMAN Uncharacterized protein C1orf105 OS=Homo sapiens
Align length	33
Score (bit)	29.6
E-value	7.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915615\|Adiantum capillus-veneris mRNA, clone: YMU001_000073_F08. (475 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O95561\|CA105_HUMAN Uncharacterized protein C1orf105 OS=Homo s... 30 7.2 >sp\|O95561\|CA105_HUMAN Uncharacterized protein C1orf105 OS=Homo sapiens GN=C1orf105 PE=1 SV=1 Length = 183 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 188 QESGLVKQDIMAIPKPPKGSFSTCLSCDLTLVQ 286 QE +V+ M IP PK SF C+S ++L Q Sbjct: 87 QEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQ 119
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7U4W3
Definition	tr\|A7U4W3\|A7U4W3_9CHLO Putative uncharacterized protein OS=Dunaliella viridis
Align length	66
Score (bit)	34.3
E-value	3.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915615\|Adiantum capillus-veneris mRNA, clone: YMU001_000073_F08. (475 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7U4W3\|A7U4W3_9CHLO Putative uncharacterized protein OS=Dunal... 34 3.2 >tr\|A7U4W3\|A7U4W3_9CHLO Putative uncharacterized protein OS=Dunaliella viridis PE=4 SV=1 Length = 4640 Score = 34.3 bits (77), Expect = 3.2 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Frame = +3 Query: 216 SWQSQSRLKEVSVL--ACHVI*HWFRKMLDQISYGSKWNGL------LNLCHPTYDTSLH 371 +W S+ K S L A H +W + D++ +G+ +N ++CHPTYD L Sbjct: 3685 AWACVSKEKMASALNFAPHTTSYWSARQRDRV-FGANYNAFATKFTGFSMCHPTYDDQLM 3743 Query: 372 RTNPQH 389 + QH Sbjct: 3744 FESAQH 3749