BP915627 |
Clone id |
YMU001_000073_G10 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000073_G10. |
Accession |
BP915627 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1569Contig1 |
Sequence |
GAAAGCTTATCGGGACACCTACGTTCCAGACACTATGGTACAGTTTGCAGCACCCGACTC TCTCTTTCTCTATAGGAATCCTAACTCTATTTAAGACGCACACGCAACAAGAGCTCAAAA CATACTGTTTCGCACCTTAGGTTCCCCGCACTGGCCCACCACCGCCAATGGGGCGACCAG CGCCACCACCTTGCATTGCTTGCATTTGATATTGTGCTTGCACATATTGATGTTGGGGAT AGACATAACCTCCTTGTGGCAGCATCATTTGCACTGATCCTGGCATACCCCCTCCATTAA TAACACCATTAACTCCCATCAAGCCTGCGGGAGACCCACTCATTGCGCCCGATTCTTTGT GCATATTTTGCTCACTTTGCTTTGCCATGCTGACTCTCTCGCCCTCAATCTCCCTGTACT TAAGCAGATAAGCTTTAAGAGGCTCCAAATAGTCCTCAAACCCAAGGGTACCCATGGCCC ATAGCAAATCATCACCATTGACTGTTTTTCGCTTCTCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P25209 |
Definition |
sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS=Zea mays |
Align length |
57 |
Score (bit) |
84.7 |
E-value |
2.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NR95 |
Definition |
tr|A9NR95|A9NR95_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
64 |
Score (bit) |
93.6 |
E-value |
5.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915627|Adiantum capillus-veneris mRNA, clone: YMU001_000073_G10. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NR95|A9NR95_PICSI Putative uncharacterized protein OS=Picea... 94 5e-18 tr|A9NL76|A9NL76_PICSI Putative uncharacterized protein OS=Picea... 93 7e-18 tr|A9TS17|A9TS17_PHYPA Predicted protein OS=Physcomitrella paten... 89 2e-16 tr|A9U3B5|A9U3B5_PHYPA Predicted protein (Fragment) OS=Physcomit... 87 5e-16 tr|A9XXD2|A9XXD2_9TRAC CCAAT-box binding factor HAP3-like protei... 86 1e-15 tr|A6XB85|A6XB85_MAIZE Transcription factor subunit NF-YB2 OS=Ze... 85 2e-15 tr|Q3EBK1|Q3EBK1_ARATH Uncharacterized protein At2g38880.3 OS=Ar... 84 4e-15 tr|A7R042|A7R042_VITVI Chromosome undetermined scaffold_296, who... 84 4e-15 tr|A7Q978|A7Q978_VITVI Chromosome chr19 scaffold_66, whole genom... 84 4e-15 tr|A6XB86|A6XB86_ARATH Transcription factor subunit NF-YB1 OS=Ar... 84 4e-15 tr|A5C8J3|A5C8J3_VITVI Putative uncharacterized protein OS=Vitis... 84 4e-15 tr|A5C0V6|A5C0V6_VITVI Putative uncharacterized protein OS=Vitis... 84 4e-15 tr|B4FVF9|B4FVF9_MAIZE Putative uncharacterized protein OS=Zea m... 84 5e-15 tr|A9P2F4|A9P2F4_PICSI Putative uncharacterized protein OS=Picea... 84 5e-15 tr|A7PTW4|A7PTW4_VITVI Chromosome chr7 scaffold_31, whole genome... 83 7e-15 tr|A5ALQ9|A5ALQ9_VITVI Putative uncharacterized protein OS=Vitis... 83 7e-15 tr|B7EQX8|B7EQX8_ORYSJ cDNA clone:J023121O11, full insert sequen... 83 9e-15 tr|A3B4V3|A3B4V3_ORYSJ Putative uncharacterized protein OS=Oryza... 83 9e-15 tr|A0MEK8|A0MEK8_ARATH Putative uncharacterized protein (Fragmen... 81 3e-14 tr|A7Q300|A7Q300_VITVI Chromosome chr12 scaffold_47, whole genom... 80 5e-14 tr|A5B7N5|A5B7N5_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5B0K3|A5B0K3_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|B6SUG8|B6SUG8_MAIZE Nuclear transcription factor Y subunit B-... 80 6e-14 tr|B6STN2|B6STN2_MAIZE Nuclear transcription factor Y subunit B-... 80 6e-14 tr|A9SIX4|A9SIX4_PHYPA Predicted protein (Fragment) OS=Physcomit... 79 1e-13 tr|Q2A9Q6|Q2A9Q6_BRAOL Transcription factor Hap3b, putative OS=B... 79 1e-13 tr|A9XXD7|A9XXD7_9TRAC CCAAT-box binding factor HAP3-like protei... 79 1e-13 tr|A9XXD6|A9XXD6_9TRAC CCAAT-box binding factor HAP3-like protei... 79 1e-13 tr|A9XXD5|A9XXD5_9TRAC CCAAT-box binding factor HAP3-like protei... 79 1e-13 tr|A9XXD3|A9XXD3_9TRAC CCAAT-box binding factor HAP3-like protei... 79 1e-13
>tr|A9NR95|A9NR95_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 228
Score = 93.6 bits (231), Expect = 5e-18 Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKESG-A 344 REKRKT+NGDDLLWAM TLGFEDY+EPLK YL KYRE+EGE+VSMAKQ +Q KE + Sbjct: 85 REKRKTINGDDLLWAMTTLGFEDYVEPLKIYLHKYREMEGEKVSMAKQGDQIPSKEGNTS 144
Query: 343 MSGS 332 ++GS Sbjct: 145 INGS 148
>tr|A9NL76|A9NL76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 220
Score = 93.2 bits (230), Expect = 7e-18 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 8/73 (10%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQS-EQNMHKE--- 353 REKRKT+NGDDLLWAMGTLGFE+Y+EPLK YL KYRE+EGE+ SMAKQS +Q+ K+ Sbjct: 87 REKRKTINGDDLLWAMGTLGFENYVEPLKVYLQKYRELEGEKTSMAKQSGDQSPSKDASS 146
Query: 352 ----SGAMSGSPA 326 +G+ +G+P+ Sbjct: 147 GSTVNGSSAGNPS 159
>tr|A9TS17|A9TS17_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96394 PE=4 SV=1 Length = 175
Score = 88.6 bits (218), Expect = 2e-16 Identities = 41/56 (73%), Positives = 46/56 (82%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKE 353 REKRKT+NGDDLLWAM TLGFEDY+EPLK YL KYRE+EGE+ S AK +Q KE Sbjct: 88 REKRKTINGDDLLWAMSTLGFEDYVEPLKVYLHKYRELEGEKASTAKGGDQQGGKE 143
>tr|A9U3B5|A9U3B5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_36907 PE=4 SV=1 Length = 111
Score = 87.0 bits (214), Expect = 5e-16 Identities = 39/56 (69%), Positives = 46/56 (82%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKE 353 REKRKT+NGDDLLWAM TLGFEDY+EPLK YL KYRE+EGE+ S+ K + + KE Sbjct: 56 REKRKTINGDDLLWAMSTLGFEDYVEPLKVYLHKYRELEGEKTSVTKGGDHSAGKE 111
>tr|A9XXD2|A9XXD2_9TRAC CCAAT-box binding factor HAP3-like protein (Fragment) OS=Selaginella moellendorffii GN=HAP3A2 PE=2 SV=1 Length = 135
Score = 85.9 bits (211), Expect = 1e-15 Identities = 38/56 (67%), Positives = 45/56 (80%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKE 353 REKRKT+NGDDLLWAM TLGFEDY+EPL+ YL KYRE EGE+ +AK E+ H + Sbjct: 62 REKRKTINGDDLLWAMSTLGFEDYVEPLRVYLHKYREQEGEKAMLAKAGERESHAD 117
>tr|A6XB85|A6XB85_MAIZE Transcription factor subunit NF-YB2 OS=Zea mays PE=2 SV=1 Length = 185
Score = 84.7 bits (208), Expect = 2e-15 Identities = 38/57 (66%), Positives = 47/57 (82%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKES 350 REKRKT+NGDDLLWAM TLGFEDY+EPLK YL KYRE+EG+ AK S+ ++ K++ Sbjct: 91 REKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDA 147
>tr|Q3EBK1|Q3EBK1_ARATH Uncharacterized protein At2g38880.3 OS=Arabidopsis thaliana GN=At2g38880 PE=4 SV=2 Length = 140
Score = 84.0 bits (206), Expect = 4e-15 Identities = 38/62 (61%), Positives = 45/62 (72%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKESGAM 341 +EKRKTVNGDDLLWAM TLGFEDYLEPLK YL +YRE+EG+ K + + G + Sbjct: 74 KEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKSGDGSNRDAGGGV 133
Query: 340 SG 335 SG Sbjct: 134 SG 135
>tr|A7R042|A7R042_VITVI Chromosome undetermined scaffold_296, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010961001 PE=4 SV=1 Length = 207
Score = 84.0 bits (206), Expect = 4e-15 Identities = 39/62 (62%), Positives = 49/62 (79%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKESGAM 341 REKRKT+NGDDLLWAM TLGFE+Y+EPLK YL K+RE+EGE+ ++ +Q E K+ G Sbjct: 81 REKRKTINGDDLLWAMMTLGFEEYVEPLKVYLQKFREVEGEKTAVGRQVE----KDGGGS 136
Query: 340 SG 335 SG Sbjct: 137 SG 138
>tr|A7Q978|A7Q978_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033366001 PE=4 SV=1 Length = 210
Score = 84.0 bits (206), Expect = 4e-15 Identities = 37/58 (63%), Positives = 48/58 (82%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKESG 347 REKRKT+NGDDLLWAM TLGFEDY++PLK YL ++RE+EGE+ SM +Q E++ +G Sbjct: 76 REKRKTINGDDLLWAMTTLGFEDYVDPLKIYLHRFREMEGEKTSMGRQGEKDGPSAAG 133
>tr|A6XB86|A6XB86_ARATH Transcription factor subunit NF-YB1 OS=Arabidopsis thaliana GN=At2g38880 PE=2 SV=1 Length = 141
Score = 84.0 bits (206), Expect = 4e-15 Identities = 38/62 (61%), Positives = 45/62 (72%) Frame = -1
Query: 520 REKRKTVNGDDLLWAMGTLGFEDYLEPLKAYLLKYREIEGERVSMAKQSEQNMHKESGAM 341 +EKRKTVNGDDLLWAM TLGFEDYLEPLK YL +YRE+EG+ K + + G + Sbjct: 74 KEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKSGDGSNRDAGGGV 133
Query: 340 SG 335 SG Sbjct: 134 SG 135
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