BP915629 |
Clone id |
YMU001_000073_G12 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000073_G12. |
Accession |
BP915629 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGAGAACATGCAACTTGAAACTGCAGCTGGCAATTTCAAACCAGCAGCAACAAATCTCA TGTTTAGGAAAACAAACTATACAAATCAAGTAATAAAAGTGGGGTTCCTTTGAACCATTC ACAAGGCAACACACAAAACCACTACCTCTTACCACAACACTCCAGCAAAACCACCTGAAA TTGATTCCCTCAGCTCGAAAAGACTAGCAGCTTTTTACATAGCTTACTCAGACTCGACGG AGAGAGTTTAGTAAAAGGGACTTCTCTCAATATGGGTACAACCAAACACAACTCATGGGC AGCTTGTGTTCAATTTACCCCTGTTTGTGCAGAAGCTCTAAAAGGCTGGTCGCCTTTCGT TTGGCTCTCGCTGTTCCAGAAACTGTAGGCTCCACAAGAGGCCCTTCAGCTCCAAGCTGA CAAGCTCTCACTAGATGACTTGGGTCACTGTTGCTTAACGCAAGAAGGATAGCAGCTGCA TTCTCCTTATTGCGTGGTGAGCTATCCTTTATAAGCTCTACCAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SNC6 |
Definition |
sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana |
Align length |
67 |
Score (bit) |
61.2 |
E-value |
3.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T0Z7 |
Definition |
tr|A9T0Z7|A9T0Z7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
68 |
Score (bit) |
64.3 |
E-value |
3.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915629|Adiantum capillus-veneris mRNA, clone: YMU001_000073_G12. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T0Z7|A9T0Z7_PHYPA Predicted protein OS=Physcomitrella paten... 64 3e-09 tr|A7PI07|A7PI07_VITVI Chromosome chr13 scaffold_17, whole genom... 59 2e-07 tr|Q5VRH9|Q5VRH9_ORYSJ Os06g0102700 protein OS=Oryza sativa subs... 56 1e-06 tr|Q5VRH8|Q5VRH8_ORYSJ Putative cell death-related protein SPL11... 56 1e-06 tr|A3B7I6|A3B7I6_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|A7NZ27|A7NZ27_VITVI Chromosome chr6 scaffold_3, whole genome ... 56 1e-06 tr|Q6Z2K3|Q6Z2K3_ORYSJ Os02g0732200 protein OS=Oryza sativa subs... 55 2e-06 tr|B8AI18|B8AI18_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|A3AB22|A3AB22_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|A7P3J9|A7P3J9_VITVI Chromosome chr1 scaffold_5, whole genome ... 54 4e-06 tr|A9SM32|A9SM32_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06 tr|B3H660|B3H660_ARATH Uncharacterized protein At1g71020.2 OS=Ar... 54 6e-06 tr|A2Y893|A2Y893_ORYSI Putative uncharacterized protein OS=Oryza... 53 8e-06 tr|B7ZYB0|B7ZYB0_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|B7ZXS6|B7ZXS6_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|B6SXY9|B6SXY9_MAIZE Spotted leaf protein 11 OS=Zea mays PE=2 ... 52 2e-05 tr|B6SVE7|B6SVE7_MAIZE Spotted leaf protein 11 OS=Zea mays PE=2 ... 52 2e-05 tr|B4FED0|B4FED0_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|B4F8U3|B4F8U3_MAIZE Putative uncharacterized protein OS=Zea m... 51 4e-05 tr|A9T7I6|A9T7I6_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 7e-05 tr|A7NSW3|A7NSW3_VITVI Chromosome chr18 scaffold_1, whole genome... 49 1e-04 tr|A5C7C9|A5C7C9_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|Q6Z250|Q6Z250_ORYSJ Os08g0481200 protein OS=Oryza sativa subs... 48 3e-04 tr|A3BU66|A3BU66_ORYSJ Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|A2YWB9|A2YWB9_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|Q570L8|Q570L8_ARATH Putative uncharacterized protein At1g2303... 48 3e-04 tr|B8BMK8|B8BMK8_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A3CIL2|A3CIL2_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A2Q4E9|A2Q4E9_MEDTR U box OS=Medicago truncatula GN=MtrDRAFT_... 45 0.003 tr|A7P8P6|A7P8P6_VITVI Chromosome chr3 scaffold_8, whole genome ... 44 0.006
>tr|A9T0Z7|A9T0Z7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234651 PE=4 SV=1 Length = 650
Score = 64.3 bits (155), Expect = 3e-09 Identities = 36/68 (52%), Positives = 41/68 (60%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LV+LIK SPRNKEN L+ DP HLV +LGA+ PL GT RAKRKA Sbjct: 569 LVDLIKSGSPRNKENAVAITVNLATHDPVHLVTTYKLGAQDPLRSLVNDGTPRAKRKAAQ 628
Query: 344 LLELLHKQ 321 LLE + KQ Sbjct: 629 LLENMRKQ 636
>tr|A7PI07|A7PI07_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018150001 PE=4 SV=1 Length = 628
Score = 58.5 bits (140), Expect = 2e-07 Identities = 34/67 (50%), Positives = 42/67 (62%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LVE+IK SPRN+EN L D HL A +LGAE L E + +GT RAKRKA + Sbjct: 555 LVEVIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKELSENGTDRAKRKAGN 614
Query: 344 LLELLHK 324 +LELL + Sbjct: 615 ILELLQR 621
>tr|Q5VRH9|Q5VRH9_ORYSJ Os06g0102700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075G19.19-1 PE=2 SV=1 Length = 611
Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/67 (46%), Positives = 42/67 (62%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LVE+IK SPRN+EN L ++D + A G E L E + +GT RAKRKA+S Sbjct: 534 LVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASS 593
Query: 344 LLELLHK 324 +LEL+H+ Sbjct: 594 ILELMHQ 600
>tr|Q5VRH8|Q5VRH8_ORYSJ Putative cell death-related protein SPL11 OS=Oryza sativa subsp. japonica GN=OSJNBa0075G19.19-2 PE=4 SV=1 Length = 604
Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/67 (46%), Positives = 42/67 (62%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LVE+IK SPRN+EN L ++D + A G E L E + +GT RAKRKA+S Sbjct: 534 LVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASS 593
Query: 344 LLELLHK 324 +LEL+H+ Sbjct: 594 ILELMHQ 600
>tr|A3B7I6|A3B7I6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019008 PE=4 SV=1 Length = 566
Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/67 (46%), Positives = 42/67 (62%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LVE+IK SPRN+EN L ++D + A G E L E + +GT RAKRKA+S Sbjct: 496 LVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASS 555
Query: 344 LLELLHK 324 +LEL+H+ Sbjct: 556 ILELMHQ 562
>tr|A7NZ27|A7NZ27_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024348001 PE=4 SV=1 Length = 682
Score = 55.8 bits (133), Expect = 1e-06 Identities = 31/63 (49%), Positives = 37/63 (58%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 LVE+I + SPRN+EN L D HL A +LG GPLV+ +GT R KRKA Sbjct: 564 LVEVIGNGSPRNRENAAAVLVHLCAGDQHHLAEAQELGVMGPLVDLAQNGTDRGKRKAAQ 623
Query: 344 LLE 336 LLE Sbjct: 624 LLE 626
>tr|Q6Z2K3|Q6Z2K3_ORYSJ Os02g0732200 protein OS=Oryza sativa subsp. japonica GN=P0643A10.18 PE=2 SV=1 Length = 637
Score = 55.1 bits (131), Expect = 2e-06 Identities = 32/67 (47%), Positives = 41/67 (61%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 L++L++ S RNKEN L D +L +LGA+ PL E + +GT RAKRKATS Sbjct: 567 LIDLLRSSQARNKENAAAILLALCKKDAENLACIGRLGAQIPLTELSKTGTDRAKRKATS 626
Query: 344 LLELLHK 324 LLE L K Sbjct: 627 LLEHLSK 633
>tr|B8AI18|B8AI18_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08816 PE=4 SV=1 Length = 637
Score = 55.1 bits (131), Expect = 2e-06 Identities = 32/67 (47%), Positives = 41/67 (61%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 L++L++ S RNKEN L D +L +LGA+ PL E + +GT RAKRKATS Sbjct: 567 LIDLLRSSQARNKENAAAILLALCKKDAENLACIGRLGAQIPLTELSKTGTDRAKRKATS 626
Query: 344 LLELLHK 324 LLE L K Sbjct: 627 LLEHLSK 633
>tr|A3AB22|A3AB22_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_007994 PE=4 SV=1 Length = 620
Score = 55.1 bits (131), Expect = 2e-06 Identities = 32/67 (47%), Positives = 41/67 (61%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 L++L++ S RNKEN L D +L +LGA+ PL E + +GT RAKRKATS Sbjct: 550 LIDLLRSSQARNKENAAAILLALCKKDAENLACIGRLGAQIPLTELSKTGTDRAKRKATS 609
Query: 344 LLELLHK 324 LLE L K Sbjct: 610 LLEHLSK 616
>tr|A7P3J9|A7P3J9_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030470001 PE=4 SV=1 Length = 569
Score = 54.3 bits (129), Expect = 4e-06 Identities = 32/67 (47%), Positives = 39/67 (58%) Frame = -2
Query: 524 LVELIKDSSPRNKENXXXXXXXLSNSDPSHLVRACQLGAEGPLVEPTVSGTARAKRKATS 345 L++L++ PRNKEN L D +L +LGA PL E SGT RAKRKATS Sbjct: 499 LIDLLRTGLPRNKENAAAILLSLCKRDNENLACISRLGAVIPLAELAKSGTERAKRKATS 558
Query: 344 LLELLHK 324 LLE L + Sbjct: 559 LLEHLQR 565
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