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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915631
Clone id YMU001_000073_H02
Library
Length 317
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGATCTACACAGAAGCAGAATAGTGACGATGATGCTCTCATATCTCTGGGAGAAGATTC
CGAGCATTTGTGATTCGAGGATGCCGTGAATGCATCAAGAGAAACTTATACGAAGGAGAT
AGATTTACCTGAAAGGTTTCAGATGCATGAACAGGATCTTACAGCAACCGCTTCAATGAA
TGATTGGACTAAAGAGGCTCACTGGATTCACAACAGATTATCTGGAGACTTCACAACAAT
CAAAGAAGACGAGGAACTTAAATGTATCACAGACATTGACAAGGAGGAAATAATCAAAGA
AATTGTAGCTGTGCTCA
■■Homology search results ■■ -
sp_hit_id Q9VKA5
Definition sp|Q9VKA5|GR33A_DROME Putative gustatory receptor 33a OS=Drosophila melanogaster
Align length 57
Score (bit) 37.0
E-value 0.03
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915631|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H02.
         (317 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VKA5|GR33A_DROME Putative gustatory receptor 33a OS=Drosoph...    37   0.030
sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6 OS=Can...    30   2.8  
sp|P42812|LOLB_PSEAE Outer-membrane lipoprotein lolB OS=Pseudomo...    29   6.3  
sp|Q02G06|LOLB_PSEAB Outer-membrane lipoprotein lolB OS=Pseudomo...    29   6.3  
sp|P53569|CEBPZ_MOUSE CCAAT/enhancer-binding protein zeta OS=Mus...    29   6.3  
sp|Q4ZXX0|LOLB_PSEU2 Outer-membrane lipoprotein lolB OS=Pseudomo...    29   8.3  
sp|Q888C4|LOLB_PSESM Outer-membrane lipoprotein lolB OS=Pseudomo...    29   8.3  
sp|A6VC64|LOLB_PSEA7 Outer-membrane lipoprotein lolB OS=Pseudomo...    29   8.3  
sp|Q48MV7|LOLB_PSE14 Outer-membrane lipoprotein lolB OS=Pseudomo...    29   8.3  

>sp|Q9VKA5|GR33A_DROME Putative gustatory receptor 33a OS=Drosophila
           melanogaster GN=Gr33a PE=2 SV=3
          Length = 475

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N DDD   S  ED +   +++A  A     T E +LP+ F++H++ L  +   N
Sbjct: 261 QQKNDDDDLDTSNDEDEDDFDYDNATIAENTGNTSEANLPDLFKLHDKILALSVITN 317


>sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6
           OS=Candida albicans GN=SPT6 PE=3 SV=1
          Length = 1401

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +2

Query: 26  DDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLT-ATASMNDWTKEAH 202
           D +   SL E  EH   ++ +    +   + ID+PER+QM+   LT       +   E  
Sbjct: 244 DKEEPASLDEVFEHSELKERMLTEEDNLIRIIDVPERYQMYRSALTYIDLDDEELELEKT 303

Query: 203 WIHNRL 220
           W+ N L
Sbjct: 304 WVANTL 309


>sp|P42812|LOLB_PSEAE Outer-membrane lipoprotein lolB OS=Pseudomonas
           aeruginosa GN=lolB PE=3 SV=2
          Length = 205

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERLKLHGQDLDVTLVIKDW 198


>sp|Q02G06|LOLB_PSEAB Outer-membrane lipoprotein lolB OS=Pseudomonas
           aeruginosa (strain UCBPP-PA14) GN=lolB PE=3 SV=1
          Length = 205

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERLKLHGQDLDVTLVIKDW 198


>sp|P53569|CEBPZ_MOUSE CCAAT/enhancer-binding protein zeta OS=Mus
           musculus GN=Cebpz PE=2 SV=2
          Length = 1052

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = +2

Query: 23  SDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMNDWTKEAH 202
           SD++  + +G+DS+   F DA   +     KE++  E     E + +A A   +  K A 
Sbjct: 629 SDEENFVDVGDDSDDEKFTDADKGTATDAVKEVESKET----EPESSAEA---EKPKAAS 681

Query: 203 WIHNRLSGDFTTIKEDEELK 262
           W+H      F  +K  +++K
Sbjct: 682 WVH------FDNLKGGKQIK 695


>sp|Q4ZXX0|LOLB_PSEU2 Outer-membrane lipoprotein lolB OS=Pseudomonas
           syringae pv. syringae (strain B728a) GN=lolB PE=3 SV=1
          Length = 205

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERVKLHGQDLDVTLVIKDW 198


>sp|Q888C4|LOLB_PSESM Outer-membrane lipoprotein lolB OS=Pseudomonas
           syringae pv. tomato GN=lolB PE=3 SV=1
          Length = 205

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERVKLHGQDLDVTLVIKDW 198


>sp|A6VC64|LOLB_PSEA7 Outer-membrane lipoprotein lolB OS=Pseudomonas
           aeruginosa (strain PA7) GN=lolB PE=3 SV=1
          Length = 205

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERLKLHGQDLDITLVIKDW 198


>sp|Q48MV7|LOLB_PSE14 Outer-membrane lipoprotein lolB OS=Pseudomonas
           syringae pv. phaseolicola (strain 1448A / Race 6)
           GN=lolB PE=3 SV=1
          Length = 205

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 125 LPERFQMHEQDLTATASMNDW 187
           LPER ++H QDL  T  + DW
Sbjct: 178 LPERVKLHGQDLDVTLVIKDW 198
tr_hit_id B4MVE6
Definition tr|B4MVE6|B4MVE6_DROWI GK15487 OS=Drosophila willistoni
Align length 60
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915631|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H02.
         (317 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4MVE6|B4MVE6_DROWI GK15487 OS=Drosophila willistoni GN=GK154...    35   1.4  
tr|A1T3U6|A1T3U6_MYCVP Acyl-CoA thioesterase OS=Mycobacterium va...    35   1.9  
tr|B4KM03|B4KM03_DROMO GI18363 OS=Drosophila mojavensis GN=GI183...    35   1.9  
tr|B3N3W3|B3N3W3_DROER GG23772 OS=Drosophila erecta GN=GG23772 P...    35   1.9  
tr|Q29M68|Q29M68_DROPS Gr33a OS=Drosophila pseudoobscura pseudoo...    35   2.4  
tr|B4Q3R3|B4Q3R3_DROSI GD23824 OS=Drosophila simulans GN=GD23824...    34   4.2  
tr|B4IE74|B4IE74_DROSE GM26747 OS=Drosophila sechellia GN=GM2674...    34   4.2  
tr|A6ELZ4|A6ELZ4_9BACT Cation efflux system protein/acriflavin r...    33   5.4  
tr|B4P1Z5|B4P1Z5_DROYA GE18576 OS=Drosophila yakuba GN=GE18576 P...    33   7.1  
tr|B4G9N7|B4G9N7_DROPE GL18615 OS=Drosophila persimilis GN=GL186...    33   7.1  

>tr|B4MVE6|B4MVE6_DROWI GK15487 OS=Drosophila willistoni GN=GK15487
           PE=4 SV=1
          Length = 481

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 2   GSTQKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           G  Q++N DDD   S  ED +   +++         T E +LP+ F++H++ L+ +   N
Sbjct: 264 GQGQQKNDDDDMDTSNDEDEDDFDYDNGSVTENTGITSEANLPDLFKLHDKILSLSVLTN 323


>tr|A1T3U6|A1T3U6_MYCVP Acyl-CoA thioesterase OS=Mycobacterium
           vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_1008 PE=4
           SV=1
          Length = 283

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 95  SRETYTKEIDLPERFQMHEQDLTATASMNDWTKEAHWIHNR 217
           +R   TK   LPER+  H + LTA   M+DW  +  W  +R
Sbjct: 145 ARSAVTKATRLPERWADHFEVLTARDGMDDWPVQPMWFRSR 185


>tr|B4KM03|B4KM03_DROMO GI18363 OS=Drosophila mojavensis GN=GI18363
           PE=4 SV=1
          Length = 853

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 122 DLPERFQMHEQDLTATASMNDWTKEAHWIHNRLSGDFTTIKED 250
           DLP R Q H+Q+   T S + WTK    + +R SG  T  + D
Sbjct: 547 DLPPRQQHHKQESQTTTSSSVWTKPVEALFSRKSGGHTESRAD 589


>tr|B3N3W3|B3N3W3_DROER GG23772 OS=Drosophila erecta GN=GG23772 PE=4
           SV=1
          Length = 475

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +DD   S  ED +   +++A  A     T E +LP+ F++H++ L  +   N
Sbjct: 261 QQKNDEDDLDTSNDEDEDDYDYDNATIAENTGNTSEANLPDLFKLHDKILALSVITN 317


>tr|Q29M68|Q29M68_DROPS Gr33a OS=Drosophila pseudoobscura
           pseudoobscura GN=Gr33a PE=4 SV=2
          Length = 484

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +D+   S  ED +   +++A  A     T E +LP+ F++H++ L+ +   N
Sbjct: 270 QQKNEEDEMDSSYDEDEDDFDYDNATIAENTGNTSEANLPDLFKLHDKILSLSVITN 326


>tr|B4Q3R3|B4Q3R3_DROSI GD23824 OS=Drosophila simulans GN=GD23824
           PE=4 SV=1
          Length = 475

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +D+   S  ED +   +++A  A     T E +LP+ F++H++ L  +   N
Sbjct: 261 QQKNDEDELDTSNDEDEDDFDYDNATIAENTGNTSEANLPDLFKLHDKILALSVITN 317


>tr|B4IE74|B4IE74_DROSE GM26747 OS=Drosophila sechellia GN=GM26747
           PE=4 SV=1
          Length = 475

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +D+   S  ED +   +++A  A     T E +LP+ F++H++ L  +   N
Sbjct: 261 QQKNDEDELDTSNDEDEDDFDYDNATIAENTGNTSEANLPDLFKLHDKILALSVITN 317


>tr|A6ELZ4|A6ELZ4_9BACT Cation efflux system protein/acriflavin
           resistance protein B family OS=unidentified eubacterium
           SCB49 GN=SCB49_07292 PE=4 SV=1
          Length = 387

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 80  DAVNASRETYTKEIDLPERFQMHEQDLTATASMNDWTKE 196
           D +N    T++ EID+P + +  + +LTA   +ND+T E
Sbjct: 270 DFINPDNRTFSVEIDVPNKDKSIKPNLTARLKVNDYTSE 308


>tr|B4P1Z5|B4P1Z5_DROYA GE18576 OS=Drosophila yakuba GN=GE18576 PE=4
           SV=1
          Length = 474

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +D++  S  ED +   +++A        T E +LP+ F++H++ L  +   N
Sbjct: 260 QQKNDEDESDTSNDEDEDDFDYDNATIVENTGNTSEANLPDLFKLHDKILALSVITN 316


>tr|B4G9N7|B4G9N7_DROPE GL18615 OS=Drosophila persimilis GN=GL18615
           PE=4 SV=1
          Length = 508

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +2

Query: 11  QKQNSDDDALISLGEDSEHL*FEDAVNASRETYTKEIDLPERFQMHEQDLTATASMN 181
           Q++N +D+   S  ED +   +++A        T E +LP+ F++H++ L+ +   N
Sbjct: 247 QQKNEEDEMDSSYDEDEDDFDYDNATIVENTGNTSEANLPDLFKLHDKILSLSVITN 303