BP915632
Clone id YMU001_000073_H03
Library
Length 436
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGATGGAGTCCTTCAGTGAAAGCACAGGAGGACCTGGAAGCCAAAGACTTGTGGAATTA
GATACCTTTTGTGAGGCAAGAGCAGCTGATAGCAAAGGTCTTGGTATAACATCAGCAGTG
CCTGGATCAAATATGCAAAACTCTGTTGCTGATAATGAACAGGCAAATGTTGCGGCACAA
GCTCATGGCAAGATATTGACAGCAGAAAACCAGAGGTCTTGTGTGCAGGATCTTGCGGTA
GCAGCGCGAAAAAGAAAATCACAAGTCTTGCAAGAAAGTGTCACTAAAGTGCTAGGCAAA
AGAGAAGGATTGAAAGGACTTCCTGAGAGGCTTGTGGCTGAAAAGAAATCAAACAAAGAC
ACAGTTGTTGATACAAGGCACCATGCCAAGAGCGTGAGGCATCATATCTCTAGAAGTGAA
GGTTTGTCAGTATCAG
■■Homology search results ■■ -
sp_hit_id Q7W0R8
Definition sp|Q7W0R8|RPOC_BORPE DNA-directed RNA polymerase subunit beta' OS=Bordetella pertussis
Align length 85
Score (bit) 33.9
E-value 0.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915632|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H03.
(436 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7W0R8|RPOC_BORPE DNA-directed RNA polymerase subunit beta' O... 34 0.30
sp|Q7W2G8|RPOC_BORPA DNA-directed RNA polymerase subunit beta' O... 34 0.30
sp|Q7WRD8|RPOC_BORBR DNA-directed RNA polymerase subunit beta' O... 34 0.30
sp|Q60LV4|MYO3_CAEBR Myosin-3 OS=Caenorhabditis briggsae GN=myo-... 34 0.30
sp|Q1LI21|RPOC_RALME DNA-directed RNA polymerase subunit beta' O... 33 0.52
sp|Q8BUK6|HOOK3_MOUSE Protein Hook homolog 3 OS=Mus musculus GN=... 33 0.52
sp|P12844|MYO3_CAEEL Myosin-3 OS=Caenorhabditis elegans GN=myo-3... 32 0.89
sp|Q2L2L3|RPOC_BORA1 DNA-directed RNA polymerase subunit beta' O... 31 2.6
sp|P03186|TEGU_EBV Large tegument protein OS=Epstein-Barr virus ... 30 3.3
sp|Q9E7N7|VP4A_LNYV Phosphoprotein OS=Lettuce necrotic yellows v... 30 3.4
sp|Q32KR6|FDFT_BOVIN Squalene synthetase OS=Bos taurus GN=FDFT1 ... 30 3.4
sp|Q7YZS9|CXI_CONVR I-superfamily conotoxin ViTx OS=Conus virgo ... 30 3.4
sp|P69500|CXI1_CONVX I-superfamily conotoxin-1 OS=Conus vexillum... 30 3.4
sp|Q92111|CP19A_ICTPU Cytochrome P450 19A1 OS=Ictalurus punctatu... 30 3.4
sp|Q891Q9|Y2309_CLOTE UPF0597 protein CTC_02309 OS=Clostridium t... 30 4.4
sp|Q21SF8|RPOC_RHOFD DNA-directed RNA polymerase subunit beta' O... 30 4.4
sp|P17210|KINH_DROME Kinesin heavy chain OS=Drosophila melanogas... 30 4.4
sp|Q8PAA6|HUTI_XANCP Imidazolonepropionase OS=Xanthomonas campes... 30 4.4
sp|Q4UTC0|HUTI_XANC8 Imidazolonepropionase OS=Xanthomonas campes... 30 4.4
sp|Q13439|GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapien... 30 4.4
sp|P43098|FAS2_CANAL Fatty acid synthase subunit alpha OS=Candid... 30 4.4
sp|A4G9U4|RPOC_HERAR DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|A4JAN3|RPOC_BURVG DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|Q39KH4|RPOC_BURS3 DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|Q63Q04|RPOC_BURPS DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|A3NEI6|RPOC_BURP6 DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|Q3JMQ4|RPOC_BURP1 DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|A3P0C4|RPOC_BURP0 DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|A1V8B1|RPOC_BURMS DNA-directed RNA polymerase subunit beta' O... 30 5.7
sp|Q62GJ7|RPOC_BURMA DNA-directed RNA polymerase subunit beta' O... 30 5.7

>sp|Q7W0R8|RPOC_BORPE DNA-directed RNA polymerase subunit beta'
OS=Bordetella pertussis GN=rpoC PE=3 SV=1
Length = 1414

Score = 33.9 bits (76), Expect = 0.30
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1

Query: 103 GITSAVPGSNMQNSVADNEQANVAAQ-----AHGKILTAENQRSCVQD--LAVAARKRKS 261
G T +PG ++ S NE V A+ ++ +L + S D ++ A+ + +
Sbjct: 1269 GDTEFIPGEQVERSELLNENDRVVAEDKRPASYDNVLLGITKASLSTDSFISAASFQETT 1328

Query: 262 QVLQESVTKVLGKREGLKGLPERLV 336
+VL E+ ++GKR+ L+GL E ++
Sbjct: 1329 RVLTEAA--IMGKRDDLRGLKENVI 1351


>sp|Q7W2G8|RPOC_BORPA DNA-directed RNA polymerase subunit beta'
OS=Bordetella parapertussis GN=rpoC PE=3 SV=1
Length = 1414

Score = 33.9 bits (76), Expect = 0.30
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1

Query: 103 GITSAVPGSNMQNSVADNEQANVAAQ-----AHGKILTAENQRSCVQD--LAVAARKRKS 261
G T +PG ++ S NE V A+ ++ +L + S D ++ A+ + +
Sbjct: 1269 GDTEFIPGEQVERSELLNENDRVVAEDKRPASYDNVLLGITKASLSTDSFISAASFQETT 1328

Query: 262 QVLQESVTKVLGKREGLKGLPERLV 336
+VL E+ ++GKR+ L+GL E ++
Sbjct: 1329 RVLTEAA--IMGKRDDLRGLKENVI 1351


>sp|Q7WRD8|RPOC_BORBR DNA-directed RNA polymerase subunit beta'
OS=Bordetella bronchiseptica GN=rpoC PE=3 SV=1
Length = 1414

Score = 33.9 bits (76), Expect = 0.30
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1

Query: 103 GITSAVPGSNMQNSVADNEQANVAAQ-----AHGKILTAENQRSCVQD--LAVAARKRKS 261
G T +PG ++ S NE V A+ ++ +L + S D ++ A+ + +
Sbjct: 1269 GDTEFIPGEQVERSELLNENDRVVAEDKRPASYDNVLLGITKASLSTDSFISAASFQETT 1328

Query: 262 QVLQESVTKVLGKREGLKGLPERLV 336
+VL E+ ++GKR+ L+GL E ++
Sbjct: 1329 RVLTEAA--IMGKRDDLRGLKENVI 1351


>sp|Q60LV4|MYO3_CAEBR Myosin-3 OS=Caenorhabditis briggsae GN=myo-3
PE=3 SV=1
Length = 1969

Score = 33.9 bits (76), Expect = 0.30
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1

Query: 106 ITSAVPGSNMQNSVADNEQANVAAQAHGKILTAENQRSCVQDLAVAARK--RKSQVLQES 279
+ AV + S + + A++ + + L+ E +++ + D K + L+
Sbjct: 872 LEEAVQRGEIARSQLETQVADLVEEKNALFLSLETEKANLADAEERNEKLNQLKATLESK 931

Query: 280 VTKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSVRHHISRSE 420
+T + G+ E ++ E L +KK + + DT+ H + + + ++E
Sbjct: 932 LTDITGQLEDMQERHEDLTRQKKKTEQELSDTKKHVQDLELTLRKAE 978


>sp|Q1LI21|RPOC_RALME DNA-directed RNA polymerase subunit beta'
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=rpoC PE=3 SV=1
Length = 1413

Score = 33.1 bits (74), Expect = 0.52
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Frame = +1

Query: 100 LGITSAVPGSNMQNSVADNEQANVAAQA-----HGKILTAENQRSCVQD--LAVAARKRK 258
+G T +PG ++ S +E V A H +L + S D ++ A+ +
Sbjct: 1275 VGDTKFIPGEQVERSELLDENDRVIADGKRPATHENLLLGITKASLSTDSFISAASFQET 1334

Query: 259 SQVLQESVTKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSVRHHISRSEGLSVS 435
++VL E+ ++GK + L+GL E ++ + T + H A+ R R ++S
Sbjct: 1335 TRVLTEAA--IMGKTDDLRGLKENVIVGRLIPAGTGL-AYHRARKAREAAERERAQAIS 1390


>sp|Q8BUK6|HOOK3_MOUSE Protein Hook homolog 3 OS=Mus musculus
GN=Hook3 PE=1 SV=2
Length = 718

Score = 33.1 bits (74), Expect = 0.52
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +1

Query: 133 MQNSVADNEQANVAAQAHGKILTAENQRSCVQDLAVAARKRKSQVLQESVTKVLGKREGL 312
MQN+V+ E+ A A G++ T + Q +Q+ ++ +K+ L ++ K +GL
Sbjct: 348 MQNTVSLEEELRKANAARGQLETYKRQVVELQN-RLSDESKKADKLDFEYKRLKEKVDGL 406

Query: 313 KGLPERLVAEKKSNKDTVVDTR 378
+ +RL E+ S K+T+ + R
Sbjct: 407 QKEKDRLRTERDSLKETIEELR 428


>sp|P12844|MYO3_CAEEL Myosin-3 OS=Caenorhabditis elegans GN=myo-3 PE=1
SV=1
Length = 1969

Score = 32.3 bits (72), Expect = 0.89
Identities = 19/107 (17%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1

Query: 106 ITSAVPGSNMQNSVADNEQANVAAQAHGKILTAENQRSCVQDLAVAARK--RKSQVLQES 279
+ AV + S +++ A++ + + L+ E +++ + D K + L+
Sbjct: 872 LEEAVQRGEIARSQLESQVADLVEEKNALFLSLETEKANLADAEERNEKLNQLKATLESK 931

Query: 280 VTKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSVRHHISRSE 420
++ + G+ E ++ E L +KK + DT+ H + + + ++E
Sbjct: 932 LSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQDLELSLRKAE 978


>sp|Q2L2L3|RPOC_BORA1 DNA-directed RNA polymerase subunit beta'
OS=Bordetella avium (strain 197N) GN=rpoC PE=3 SV=1
Length = 1413

Score = 30.8 bits (68), Expect = 2.6
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1

Query: 103 GITSAVPGSNMQNSVADNEQANVAAQ-----AHGKILTAENQRSCVQD--LAVAARKRKS 261
G +PG ++ S NE V A+ + +L + S D ++ A+ + +
Sbjct: 1269 GDADFIPGEQVERSELLNENDRVIAEDKRPAQYDNVLLGITKASLSTDSFISAASFQETT 1328

Query: 262 QVLQESVTKVLGKREGLKGLPERLV 336
+VL E+ ++GKR+ L+GL E ++
Sbjct: 1329 RVLTEAA--IMGKRDDLRGLKENVI 1351


>sp|P03186|TEGU_EBV Large tegument protein OS=Epstein-Barr virus
(strain B95-8) GN=BPLF1 PE=3 SV=1
Length = 3149

Score = 30.4 bits (67), Expect = 3.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3

Query: 128 DPGTADVIPRPLLSAALASQKVSNSTSLWLPGPPVLSLKD 9
DPG A++ P P + A A ++++ ++LW P +L+ ++
Sbjct: 1649 DPGQANLPPPPTIPQATAPPRLASDSALWPKKPQLLTRRE 1688


>sp|Q9E7N7|VP4A_LNYV Phosphoprotein OS=Lettuce necrotic yellows
virus GN=P PE=2 SV=1
Length = 300

Score = 30.4 bits (67), Expect = 3.4
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +1

Query: 1 KMESFSESTGGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNS-VADNEQANVAA 177
KM++ S+ + L+EL AA S+G+ +T MQN+ +A + + A
Sbjct: 50 KMDNKGSSSSSKAVKDLLEL-------AAKSQGIVVTDV-----MQNTAIALHHNLGLDA 97

Query: 178 QAHGKILTAEN--QRSCVQDLAVAARKRKSQVLQESVTKVLGKREGLKGLPERLVAEKKS 351
+ + S + + V+A K LQ V + G+KG E LV++ K+
Sbjct: 98 SSLDWFVAGITFANNSMIMEKMVSAIKE----LQIEVRNIQVASSGIKGTSEELVSKMKA 153

Query: 352 NKDTVV 369
NK+ +V
Sbjct: 154 NKNDIV 159


tr_hit_id Q5CV61
Definition tr|Q5CV61|Q5CV61_CRYPV Signal peptide containing protein OS=Cryptosporidium parvum Iowa II
Align length 135
Score (bit) 37.7
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915632|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H03.
(436 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5CV61|Q5CV61_CRYPV Signal peptide containing protein OS=Cryp... 38 0.29
tr|B4ICT6|B4ICT6_DROSE GM16690 OS=Drosophila sechellia GN=GM1669... 37 0.64
tr|B3K6V8|B3K6V8_9BACI Aminoglycoside phosphotransferase OS=Geob... 35 1.9
tr|B4NLI8|B4NLI8_DROWI GK18410 OS=Drosophila willistoni GN=GK184... 35 1.9
tr|B4NBS8|B4NBS8_DROWI GK18649 OS=Drosophila willistoni GN=GK186... 35 1.9
tr|B4JCJ6|B4JCJ6_DROGR GH11081 OS=Drosophila grimshawi GN=GH1108... 35 2.4
tr|Q89F37|Q89F37_BRAJA Flagellar M-ring protein OS=Bradyrhizobiu... 34 3.2
tr|B5DJQ9|B5DJQ9_DROPS GA29007 OS=Drosophila pseudoobscura pseud... 34 3.2
tr|B4MJT9|B4MJT9_DROWI GK20895 OS=Drosophila willistoni GN=GK208... 34 3.2
tr|B4GT49|B4GT49_DROPE GL26659 OS=Drosophila persimilis GN=GL266... 34 3.2
tr|Q2SX64|Q2SX64_BURTA Non-ribosomal peptide synthetase, putativ... 34 4.1
tr|A9IJ22|A9IJ22_BORPD DNA-directed RNA polymerase OS=Bordetella... 33 5.4
tr|B6BV84|B6BV84_9PROT DNA-directed RNA polymerase, beta' subuni... 33 5.4
tr|B4VI29|B4VI29_9CYAN Aminotransferase, classes I and II superf... 33 5.4
tr|A8J1W4|A8J1W4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 33 5.4
tr|A4I673|A4I673_LEIIN Kinesin-like protein OS=Leishmania infant... 33 5.4
tr|B7XNB9|B7XNB9_9MICR Transcriptional regulatory protein OS=Ent... 33 5.4
tr|Q7TQ77|Q7TQ77_RAT Ac1288 OS=Rattus norvegicus GN=Hook3 PE=1 SV=1 33 7.1
tr|Q5BKS5|Q5BKS5_MOUSE Hook homolog 3 (Drosophila) OS=Mus muscul... 33 7.1
tr|Q540A0|Q540A0_MOUSE Microtubule binding protein hook3 OS=Mus ... 33 7.1
tr|B2UFV8|B2UFV8_RALPJ RNA binding S1 domain protein OS=Ralstoni... 33 7.1
tr|B0SK95|B0SK95_LEPBP Chemotaxis MotB protein OS=Leptospira bif... 33 7.1
tr|B0SA56|B0SA56_LEPBA Endoflagellar motor protein OS=Leptospira... 33 7.1
tr|Q1DPY9|Q1DPY9_COCIM Putative uncharacterized protein OS=Cocci... 33 7.1
tr|B6JXK2|B6JXK2_SCHJP Predicted protein OS=Schizosaccharomyces ... 33 7.1
tr|B1I534|B1I534_DESAP Methyl-accepting chemotaxis sensory trans... 33 9.2
tr|Q4MSC0|Q4MSC0_BACCE Carbohydrate diacid regulator OS=Bacillus... 33 9.2

>tr|Q5CV61|Q5CV61_CRYPV Signal peptide containing protein
OS=Cryptosporidium parvum Iowa II GN=cgd8_5300 PE=4 SV=1
Length = 816

Score = 37.7 bits (86), Expect = 0.29
Identities = 33/135 (24%), Positives = 55/135 (40%)
Frame = +1

Query: 19 ESTGGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNSVADNEQANVAAQAHGKIL 198
ES+ P S+ + D F D + A+PG + S +E
Sbjct: 162 ESSSEPKSESMK--DGFISIYDEDYDRMLNKGAIPGIVSEESGKSSEYVG---------- 209

Query: 199 TAENQRSCVQDLAVAARKRKSQVLQESVTKVLGKREGLKGLPERLVAEKKSNKDTVVDTR 378
E Q+S V + + K +L+ S +++LG++ +GLPE +V + S D
Sbjct: 210 -GEEQKSAVPEQSEVEESNKEDILRSSDSQILGEKSLQEGLPESVVLNEGSRSSIAKDVE 268

Query: 379 HHAKSVRHHISRSEG 423
+ SV+H S G
Sbjct: 269 NE-DSVKHKPSTVSG 282


>tr|B4ICT6|B4ICT6_DROSE GM16690 OS=Drosophila sechellia GN=GM16690
PE=4 SV=1
Length = 2936

Score = 36.6 bits (83), Expect = 0.64
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1

Query: 10 SFSESTGGPGSQRLVELDTFCEARAADSKGLGI---TSAVPGSNMQNSVADNEQANVAAQ 180
S S ST S+R E D F + +K LG+ S +P S+ S A + AN AA
Sbjct: 2597 SASASTSHSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSSAGGSSASSSTANAAAA 2656

Query: 181 AHGKILTAENQRSCVQDLAVAARKR 255
A+ L AE Q Q A++ R R
Sbjct: 2657 AYAAALDAEQQHQ-QQQKALSKRSR 2680


>tr|B3K6V8|B3K6V8_9BACI Aminoglycoside phosphotransferase
OS=Geobacillus sp. Y412MC10 GN=GYMC10DRAFT_1395 PE=4
SV=1
Length = 333

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1

Query: 262 QVLQESVTKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSV 396
Q+LQE+ T++ G+ E LK LP++LV + + +VD+ K +
Sbjct: 175 QILQEAYTEISGRLESLKNLPQQLVHGDLNFSNLLVDSEQSGKVI 219


>tr|B4NLI8|B4NLI8_DROWI GK18410 OS=Drosophila willistoni GN=GK18410
PE=4 SV=1
Length = 334

Score = 35.0 bits (79), Expect = 1.9
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1

Query: 16 SESTGGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNSV------ADNEQANVAA 177
S+ G PG+ V +D AA S G GIT + G + + ADNE A V+A
Sbjct: 178 SQIYGSPGTVGAVAIDACGNVAAATSTG-GITGKLSGRIGDSPILGGGTYADNETAAVSA 236

Query: 178 QAHGKILTAENQRSCVQDLAVAARKRKSQVLQESVTKVLGK 300
HG+ + N V +A + + QE+ +VL +
Sbjct: 237 TGHGETIMRYN----VVSRMLALVQHANHTAQEAAERVLNE 273


>tr|B4NBS8|B4NBS8_DROWI GK18649 OS=Drosophila willistoni GN=GK18649
PE=4 SV=1
Length = 334

Score = 35.0 bits (79), Expect = 1.9
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1

Query: 16 SESTGGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNSV------ADNEQANVAA 177
S+ G PG+ V +D AA S G GIT + G + + ADNE A V+A
Sbjct: 178 SQIYGSPGTVGAVAIDACGNVAAATSTG-GITGKLSGRIGDSPILGGGTYADNETAAVSA 236

Query: 178 QAHGKILTAENQRSCVQDLAVAARKRKSQVLQESVTKVLGK 300
HG+ + N V +A + + QE+ +VL +
Sbjct: 237 TGHGETIMRYN----VVSRMLALVQHANHTAQEAAERVLNE 273


>tr|B4JCJ6|B4JCJ6_DROGR GH11081 OS=Drosophila grimshawi GN=GH11081
PE=4 SV=1
Length = 326

Score = 34.7 bits (78), Expect = 2.4
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1

Query: 28 GGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNSV------ADNEQANVAAQAHG 189
G PG+ V +D AA S G G+ +PG +SV ADNE ++A HG
Sbjct: 176 GPPGTVGAVAIDACGNVAAATSTG-GLMGKLPGRIGDSSVLGAGTYADNESGAISATGHG 234

Query: 190 KILTAENQRSCVQDLAVAARKRKSQVLQESVTKVL 294
+ + N S + L + +Q +Q++ VL
Sbjct: 235 ETIMRFNVASRILTLV----QHGNQTMQQATEHVL 265


>tr|Q89F37|Q89F37_BRAJA Flagellar M-ring protein OS=Bradyrhizobium
japonicum GN=fliF PE=4 SV=1
Length = 553

Score = 34.3 bits (77), Expect = 3.2
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Frame = +1

Query: 10 SFSESTGGPGSQRLVELDTFCEARAADSKGLGITSAVPGSNMQNSVADNEQANVAAQAHG 189
SF + P + ++ D EAR A S + +A+PG + A G
Sbjct: 174 SFRATQQPPSASVVLRTDGAIEARTAQSIRHLVAAAIPGMSRDKV--------TVLDADG 225

Query: 190 KILTAENQRSCVQDLAVAA-RKRKSQVLQESVTKVLGKREGLK----GLPERLVAEKKSN 354
+L AE + +A+ +K ++QE++ K L GL + +L +K+
Sbjct: 226 SMLLAEEDEATAAPTKMASLQKTVGGMVQENIRKALTPYLGLDNFEVSVAPQLSTDKRQT 285

Query: 355 KDTVVDTRHHA-KSVRH 402
+TV D A +SVR+
Sbjct: 286 NETVYDPEGRAERSVRN 302


>tr|B5DJQ9|B5DJQ9_DROPS GA29007 OS=Drosophila pseudoobscura
pseudoobscura GN=GA29007 PE=4 SV=1
Length = 308

Score = 34.3 bits (77), Expect = 3.2
Identities = 25/122 (20%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1

Query: 55 ELDTFCEARAADSKGLGITSAVPGSNMQNSVADNEQANVAAQAHGKILTAENQRSCVQDL 234
+L+ CE++A+ S G +S+ S + S+AD + + Q ++ + +++
Sbjct: 165 QLNDDCESQASSSMGCSSSSSSSSSRVSGSIADVDDDWLPEQTSSS--SSSPAYTSMENT 222

Query: 235 AVAARKRKSQVLQESV-TKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSVRHHIS 411
++AA K++++ V + + K+E K R +KK ++V+ H +
Sbjct: 223 SMAAPKKRTRTYGRGVEDRKIRKKEQNKNAATRYRQKKKIEMESVLGEEHELTQENEGLR 282

Query: 412 RS 417
R+
Sbjct: 283 RT 284


>tr|B4MJT9|B4MJT9_DROWI GK20895 OS=Drosophila willistoni GN=GK20895
PE=4 SV=1
Length = 977

Score = 34.3 bits (77), Expect = 3.2
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1

Query: 127 SNMQNSVADNEQANVAAQAHGKILTAENQRSCVQDLAVAARKRKSQVL--QESVTKVLGK 300
+NM SVADNE+A +AA+ +++ + + A + K QV+ +E + +
Sbjct: 425 ANMSASVADNERARLAAECERLYQQLDDKDEEINQQSQYAEQLKEQVMEQEELIANARRE 484

Query: 301 REGLKGLPERLVAEKKSNKDTV 366
E L+ R+ E +S K+ V
Sbjct: 485 YEALQSEMARIQQENESAKEEV 506


>tr|B4GT49|B4GT49_DROPE GL26659 OS=Drosophila persimilis GN=GL26659
PE=4 SV=1
Length = 308

Score = 34.3 bits (77), Expect = 3.2
Identities = 25/122 (20%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1

Query: 55 ELDTFCEARAADSKGLGITSAVPGSNMQNSVADNEQANVAAQAHGKILTAENQRSCVQDL 234
+L+ CE++A+ S G +S+ S + S+AD + + Q ++ + +++
Sbjct: 165 QLNDDCESQASSSMGCSSSSSSSSSRVSGSIADVDDDWLPEQTSSS--SSSPAYTSMENT 222

Query: 235 AVAARKRKSQVLQESV-TKVLGKREGLKGLPERLVAEKKSNKDTVVDTRHHAKSVRHHIS 411
++AA K++++ V + + K+E K R +KK ++V+ H +
Sbjct: 223 SMAAPKKRTRTYGRGVEDRKIRKKEQNKNAATRYRQKKKIEMESVLGEEHELTQENEGLR 282

Query: 412 RS 417
R+
Sbjct: 283 RT 284