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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915634
Clone id YMU001_000073_H05
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000073_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGAGTGGAGGGTGAATTGGCAGATACCCCTCAAATTTGGAATCTATACCTTAAGACCTT
TGGTTTTGGAGCTTCCAAGGAAGAAGCTTGGTTAGGTCATTTTAGCAATTAGGTGTAGTG
CTTGTTGTATAAAGGGGAGCACTGTGTGCTCTCTTGTAAACACATTGACCGATGTGAGAA
CATAATAGTCACTTTAACACACTAAGGTAATGAGCTGACAATACTTTGCCCGTGACAAGT
CCATTGGTACACCTGGGTGGGTTTGATGTGATATGTCGAGCCAAGGTGTGATGTTTAGTG
ATTGACCTCGGGACGAGTCTAATGTAAAAGGTTGGACCAAGAGGTGGAATCCAATGTGAA
ACGTTGGACCCACATGAAAAGTTTAATGTGAAATGTTGATGAATGCTTTATGGTGTGTAT
GCCATACATGATATTGTGTAATGATGCATTGACACGATGATTTGCATACATGTTTGTAAG
CCATCGTTACTAAAATTTTATGTTGTCTCTACAGGTGTAATCGGAGACGATTACTCTTCT
TTT
■■Homology search results ■■ -
sp_hit_id O46421
Definition sp|O46421|EST1_MACFA Liver carboxylesterase 1 OS=Macaca fascicularis
Align length 44
Score (bit) 34.3
E-value 0.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915634|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H05.
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O46421|EST1_MACFA Liver carboxylesterase 1 OS=Macaca fascicul...    34   0.40 
sp|P23141|EST1_HUMAN Liver carboxylesterase 1 OS=Homo sapiens GN...    32   2.6  
sp|P16303|CES3_RAT Carboxylesterase 3 OS=Rattus norvegicus GN=Ce...    31   3.4  
sp|Q8VCT4|CES3_MOUSE Carboxylesterase 3 OS=Mus musculus GN=Ces3 ...    31   3.4  

>sp|O46421|EST1_MACFA Liver carboxylesterase 1 OS=Macaca
           fascicularis GN=CES1 PE=2 SV=1
          Length = 566

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLS 216
           PPLGP   +R  P    +  +  ++ TS PP C+   V G+VLS
Sbjct: 58  PPLGP---LRFTPPQPAEPWSFVKNATSYPPMCSQDAVAGQVLS 98


>sp|P23141|EST1_HUMAN Liver carboxylesterase 1 OS=Homo sapiens
           GN=CES1 PE=1 SV=2
          Length = 567

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLS 216
           PPLGP   +R  P    +  +  ++ TS PP CT     G++LS
Sbjct: 58  PPLGP---LRFTPPQPAEPWSFVKNATSYPPMCTQDPKAGQLLS 98


>sp|P16303|CES3_RAT Carboxylesterase 3 OS=Rattus norvegicus GN=Ces3
           PE=1 SV=2
          Length = 565

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLSAHYLSVLK*LLCSHIG 168
           PPLG    +R  P    +     ++ TS PP C+   V G+VLS  + +  + +      
Sbjct: 58  PPLGS---LRFAPPQPAEPWNFVKNTTSYPPMCSQDAVGGQVLSELFTNRKENIPLQFSE 114

Query: 167 QCVYKRAHS-APLYTTSTTP 111
            C+Y   ++ A L   S  P
Sbjct: 115 DCLYLNVYTPADLTKNSRLP 134


>sp|Q8VCT4|CES3_MOUSE Carboxylesterase 3 OS=Mus musculus GN=Ces3
           PE=1 SV=1
          Length = 565

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLSAHYLSVLK*LLCSHIG 168
           PPLG    +R  P    +  +  ++ TS PP C+   V G+VLS  + +  + +      
Sbjct: 58  PPLGS---LRFAPPQPAEPWSFVKNTTSYPPMCSQDAVGGQVLSELFTNRKENIPLQFSE 114

Query: 167 QCVYKRAHS-APLYTTSTTP 111
            C+Y   ++ A L   S  P
Sbjct: 115 DCLYLNIYTPADLTKNSRLP 134
tr_hit_id B8CEM0
Definition tr|B8CEM0|B8CEM0_THAPS Predicted protein (Fragment) OS=Thalassiosira pseudonana CCMP1335
Align length 86
Score (bit) 39.3
E-value 0.14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915634|Adiantum capillus-veneris mRNA, clone:
YMU001_000073_H05.
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8CEM0|B8CEM0_THAPS Predicted protein (Fragment) OS=Thalassio...    39   0.14 
tr|Q95N05|Q95N05_CANFA Carboxylesterase D1 OS=Canis familiaris G...    34   5.7  
tr|Q8TDZ9|Q8TDZ9_HUMAN Brain carboxylesterase hBr2 OS=Homo sapie...    34   5.7  
tr|Q5FWH4|Q5FWH4_MOUSE Predicted OS=Mus musculus GN=EG244595 PE=...    33   7.4  
tr|B6X670|B6X670_9ENTR Putative uncharacterized protein OS=Provi...    33   7.4  

>tr|B8CEM0|B8CEM0_THAPS Predicted protein (Fragment)
           OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_38469
           PE=4 SV=1
          Length = 305

 Score = 39.3 bits (90), Expect = 0.14
 Identities = 24/86 (27%), Positives = 38/86 (44%)
 Frame = -2

Query: 485 DGLQTCMQIIVSMHHYTISCMAYTP*SIHQHFTLNFSCGSNVSHWIPPLGPTFYIRLVPR 306
           DG+    ++I+S H  +  CMA+   S +Q++ L    G N+ +W P + P        +
Sbjct: 44  DGVNFSFELIMSAHDQSFRCMAW---SHNQNYLLTSDSGGNIKYWSPSIAPV-------Q 93

Query: 305 SITKHHTLARHITSNPPRCTNGLVTG 228
           SI  H     H  S  P  T  +  G
Sbjct: 94  SIDSHDGQPIHALSFSPADTKFVSCG 119


>tr|Q95N05|Q95N05_CANFA Carboxylesterase D1 OS=Canis familiaris
           GN=CESdD1 PE=2 SV=1
          Length = 565

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLS 216
           PPLGP   +R  P    +     ++ TS PP C+   V G+VLS
Sbjct: 58  PPLGP---LRFAPPQAAEPWNFVKNTTSYPPMCSQDAVGGQVLS 98


>tr|Q8TDZ9|Q8TDZ9_HUMAN Brain carboxylesterase hBr2 OS=Homo sapiens
           GN=CES hBr2 PE=2 SV=1
          Length = 565

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLS 216
           PPLGP   +R  P    +     ++ TS PP C+   V G+VLS
Sbjct: 58  PPLGP---LRFAPPQAAEPWNFVKNTTSYPPMCSQDAVGGQVLS 98


>tr|Q5FWH4|Q5FWH4_MOUSE Predicted OS=Mus musculus GN=EG244595 PE=2
           SV=1
          Length = 563

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = -2

Query: 347 PPLGPTFYIRLVPRSITKHHTLARHITSNPPRCTNGLVTGKVLSAHYLSVLK*LLCSHIG 168
           PPLGP   +R  P    +  +  ++ TS PP C+     G VLS  + + L+ +   +  
Sbjct: 58  PPLGP---LRFAPPQPAETWSSVKNTTSYPPMCSQITGVGPVLSDVFTNQLENVPLEYSE 114

Query: 167 QCVYKRAHS 141
            C+Y   +S
Sbjct: 115 DCLYLNIYS 123


>tr|B6X670|B6X670_9ENTR Putative uncharacterized protein
           OS=Providencia rustigianii DSM 4541 GN=PROVRUST_02754
           PE=4 SV=1
          Length = 359

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = -2

Query: 515 PVETT*NFSNDGLQTCMQIIVSMHHYTISCMAYTP*SIHQHFTLNFSC 372
           P+ TT NFSN GL      +VS+   +I+ +  TP + +  F LNF+C
Sbjct: 203 PILTTCNFSNQGL------VVSLPPVSINTVKNTPRAGYTPFNLNFAC 244