BP915638 [AcEST]

BP915638
Clone id	YMU001_000073_H10
Library	YMU01
Length	518
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000073_H10.
Accession	BP915638
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2073Contig1
Sequence	GAACAAGAAGTGTTGCAGCTCGTTTATGTGTGTATTTGGCTCCCAAAATAGTGTTTTTTG CATATCTCCGTCACACAGAGTCGGATGAATATGATTTAGGAGTCTAGGTTGGAGTTTTGG CACATTCTAGACGCGATGGTGATGTCCATTTTTTGAAATTTTGGTCAAAATTACAATAGG TGCAATAGCAACAAGTTTATGCTACGTTTTCTAGCTGAAAACGAATGTTTTCGACATATA TCTCACACCCAGACTCAGATATATGTGATTTAGGAGTTTACCTTGGGATTCTGGCACGTT CTCGAAGCGCTTGTCATATCAAAAATTTGAAGTTTCGAGCGTAGAATTTTGTGCAACAGC CTGTCAAAAATCTCAACATATCAAACTTTCGCAGTTTGATTCCTACATAGTAGAGAATGA TGCGATTTGCATCTTTGGCTATGTATGGCACATTGTGATGCTATTTGAGAGAGAATTCAT CTTGTTTTTGCATATGGAAGTGGTGCTTTGGGGTGTGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q5BIW4
Definition	sp\|Q5BIW4\|ALS2_PANTR Alsin OS=Pan troglodytes
Align length	37
Score (bit)	30.4
E-value	4.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915638\|Adiantum capillus-veneris mRNA, clone: YMU001_000073_H10. (504 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q5BIW4\|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1 30 4.9 sp\|Q96Q42\|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=1 30 4.9 >sp\|Q5BIW4\|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1 Length = 1657 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 274 EFTLGFWHVLEALVISKISFERRILCNSLSKISTYQ 384 E+TLGFW + + ERR+LC S ++ + Q Sbjct: 890 EYTLGFWKTFPGKMTDSLRKPERRLLCESSNRALSLQ 926 >sp\|Q96Q42\|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=1 Length = 1657 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 274 EFTLGFWHVLEALVISKISFERRILCNSLSKISTYQ 384 E+TLGFW + + ERR+LC S ++ + Q Sbjct: 890 EYTLGFWKTFPGKMTDSLRKPERRLLCESSNRALSLQ 926
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0CR33
Definition	tr\|B0CR33\|B0CR33_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length	62
Score (bit)	32.7
E-value	9.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915638\|Adiantum capillus-veneris mRNA, clone: YMU001_000073_H10. (504 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0CR33\|B0CR33_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.9 >tr\|B0CR33\|B0CR33_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_187225 PE=4 SV=1 Length = 565 Score = 32.7 bits (73), Expect = 9.9 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +3 Query: 252 DSDICDLGVYLGILARSRSACHIKNLKFRANFVQQPVKNLNISNFRSLIPT*RMMRFA 431 DS IC V GI++ S+ C L NF+ L+ F S+ P R + F Sbjct: 163 DSFICAAAVQAGIISNSKGGCGTLQLAGNFTNFLPYTANGLSSLGFPSVFPLSFRFLDFT 222 Query: 432 SL 437 SL Sbjct: 223 SL 224