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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915645
Clone id YMU001_000074_A09
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGTTGCTCAAATGGAAGATCCTAATTAGACATTTTTGTCAAAGTGTGATCTGTGCTATC
CCCCTTTGTACAGCAAGACTTTGCCATTTATTGCATTCTGAGGTTCCTTGGTGATTTAGC
TCAGCCTTGTTTGTGAGCATTGTCGTACAAATGCTCTCTGCCTTCTATGTTAATACGTTA
GAACACCCTTTTTCAAGCGCCCGCTGTTTTCAAGCGCCACGTCCCTAGGTATACATACCT
AAAAGCGCTACCATCTACACAGATCTACACAGGCTGACGAGAGCATCAGAGACAGAATAT
TCCTAGGACCATTCCTAGTGCATCATTCCAGGGGGGAGACTAAGTCCAAACCAGCAATCT
TCCCACAGGGCACACCATACACTATCTCAAGTGAGCATTACTTCAATTCACCAGCCTGCA
TATCATCAATTTCATAACGAACCTCTTCAATGTACTCATTGATAGCTGACACGGCATCTT
GCACGCCTTTTATAGCTTCATTCAAAGCAGCATTGTATTCAAACTCTG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915645|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_A09.
         (514 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B6UGE0
Definition tr|B6UGE0|B6UGE0_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 34
Score (bit) 50.1
E-value 7.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915645|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_A09.
         (514 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6UGE0|B6UGE0_MAIZE Putative uncharacterized protein OS=Zea m...    50   7e-05
tr|Q9FF82|Q9FF82_ARATH Dbj|BAA90353.1 OS=Arabidopsis thaliana GN...    50   9e-05
tr|Q1PE01|Q1PE01_ARATH Putative uncharacterized protein OS=Arabi...    50   9e-05
tr|A0MFD8|A0MFD8_ARATH Putative uncharacterized protein (Fragmen...    50   9e-05
tr|B6UF75|B6UF75_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|Q5NBH1|Q5NBH1_ORYSJ cDNA clone:002-180-E02, full insert seque...    47   4e-04
tr|A2ZRK0|A2ZRK0_ORYSJ Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A2WN70|A2WN70_ORYSI Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A5B8C0|A5B8C0_VITVI Putative uncharacterized protein (Chromos...    47   6e-04
tr|A8IXX2|A8IXX2_BRACM Putative uncharacterized protein OS=Brass...    47   7e-04
tr|A9S9F0|A9S9F0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.9  

>tr|B6UGE0|B6UGE0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 241

 Score = 50.1 bits (118), Expect = 7e-05
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -1

Query: 514 NAALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           +AAL EAI+GVQ AVS+INE++EEVRYEID ++A
Sbjct: 187 DAALKEAIQGVQVAVSSINEHMEEVRYEIDGLEA 220


>tr|Q9FF82|Q9FF82_ARATH Dbj|BAA90353.1 OS=Arabidopsis thaliana
           GN=At5g04910 PE=4 SV=1
          Length = 217

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 21/32 (65%), Positives = 30/32 (93%)
 Frame = -1

Query: 508 ALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           AL EAI+GVQDAV++INEY+E++RYEI+ ++A
Sbjct: 185 ALKEAIRGVQDAVTSINEYLEDIRYEIEALEA 216


>tr|Q1PE01|Q1PE01_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana GN=At5g04910 PE=2 SV=1
          Length = 222

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 21/32 (65%), Positives = 30/32 (93%)
 Frame = -1

Query: 508 ALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           AL EAI+GVQDAV++INEY+E++RYEI+ ++A
Sbjct: 190 ALKEAIRGVQDAVTSINEYLEDIRYEIEALEA 221


>tr|A0MFD8|A0MFD8_ARATH Putative uncharacterized protein (Fragment)
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 223

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 21/32 (65%), Positives = 30/32 (93%)
 Frame = -1

Query: 508 ALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           AL EAI+GVQDAV++INEY+E++RYEI+ ++A
Sbjct: 190 ALKEAIRGVQDAVTSINEYLEDIRYEIEALEA 221


>tr|B6UF75|B6UF75_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 241

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 514 NAALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           +AAL EAI GVQ AVS+INE++EEVRYEID ++A
Sbjct: 187 DAALKEAIHGVQVAVSSINEHMEEVRYEIDGLEA 220


>tr|Q5NBH1|Q5NBH1_ORYSJ cDNA clone:002-180-E02, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0499C11.19 PE=2 SV=1
          Length = 241

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = -1

Query: 514 NAALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           + AL EAI+GVQ+AV++INE++EEVRYEID + A
Sbjct: 187 DGALKEAIQGVQEAVTSINEHMEEVRYEIDALGA 220


>tr|A2ZRK0|A2ZRK0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001172 PE=4 SV=1
          Length = 211

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = -1

Query: 514 NAALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           + AL EAI+GVQ+AV++INE++EEVRYEID + A
Sbjct: 157 DGALKEAIQGVQEAVTSINEHMEEVRYEIDALGA 190


>tr|A2WN70|A2WN70_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01298 PE=4 SV=1
          Length = 241

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = -1

Query: 514 NAALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           + AL EAI+GVQ+AV++INE++EEVRYEID + A
Sbjct: 187 DGALKEAIQGVQEAVTSINEHMEEVRYEIDALGA 220


>tr|A5B8C0|A5B8C0_VITVI Putative uncharacterized protein (Chromosome
           undetermined scaffold_71, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00033899001 PE=4 SV=1
          Length = 203

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 20/32 (62%), Positives = 29/32 (90%)
 Frame = -1

Query: 508 ALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           ALNEAI+GVQDAV+ IN+++EE++YEI  ++A
Sbjct: 171 ALNEAIRGVQDAVTTINDHLEEIKYEIAALEA 202


>tr|A8IXX2|A8IXX2_BRACM Putative uncharacterized protein OS=Brassica
           campestris PE=2 SV=1
          Length = 196

 Score = 46.6 bits (109), Expect = 7e-04
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -1

Query: 508 ALNEAIKGVQDAVSAINEYIEEVRYEIDDMQA 413
           AL E I+GVQDAV+ INEY+E+VRYEI  ++A
Sbjct: 164 ALKEVIRGVQDAVTCINEYLEDVRYEIAALEA 195