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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915653
Clone id YMU001_000074_B06
Library
Length 422
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGAGATATAATGAATAACCCTGAATATCATAATACACAATGGTGTGTGCTGATGAGCTG
TTAGAATTTCCTTAGACAATAATGGTACAAATTTGGCGAAATCCTTGACACACAATACAG
TTATGCCCTGTATAGCCACTCACATTGACCTTCTACTGTATTGCTGCTGTAGATAAGCAT
TTGCCTACCATCATGGTCAGACTTCGGTGGGAAAAAAATGATTTACATAGATGGTCAGCA
CTCGTGCAGGCAGAAAATCTGGCAACTACGTCAAGCAAAATAACCAGATTCCCGACTACC
AGCTGGGCCAAGAAAAGTGGGAGACCCTACTTGAGCAGGCATTGCAACATAAGACTGATG
ATTATGAGAAAAGCGCTGCGAAAAAACTTCTCCCGTCCTGTGAAACACATGATCTGATCT
TC
■■Homology search results ■■ -
sp_hit_id Q9RMV4
Definition sp|Q9RMV4|Y6611_BACAN Uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 OS=Bacillus anthracis
Align length 80
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915653|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_B06.
         (422 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9RMV4|Y6611_BACAN Uncharacterized protein pXO2-81/BXB0111/GB...    32   1.3  
sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 OS=Caenorh...    31   2.3  
sp|Q6T264|MAML1_MOUSE Mastermind-like protein 1 OS=Mus musculus ...    30   5.0  
sp|A6W961|T23O_KINRD Tryptophan 2,3-dioxygenase OS=Kineococcus r...    29   8.6  
sp|Q6D0B9|NHAA_ERWCT Na(+)/H(+) antiporter nhaA OS=Erwinia carot...    29   8.6  
sp|A6QP75|AL2CL_BOVIN ALS2 C-terminal-like protein OS=Bos taurus...    29   8.6  

>sp|Q9RMV4|Y6611_BACAN Uncharacterized protein
           pXO2-81/BXB0111/GBAA_pXO2_0111 OS=Bacillus anthracis
           GN=pXO2-81 PE=4 SV=1
          Length = 589

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +1

Query: 157 CIAAVDKHLPTIMVRLRWEKNDLHRWSALVQAENLATTSSKITRFPTTSWAKKSGRPYLS 336
           CIA     +  +MV ++W + DL +  A+   E  A  S +I      S   +    Y+ 
Sbjct: 401 CIALEHNEIKKLMVVIQWSEADLEKNKAIPFGEANAIMSKRIAEIDAESKRAEEKGEYVP 460

Query: 337 RHCNIRLMIMRKALRKNFSR 396
                  +I+ K + K+F+R
Sbjct: 461 YEKTRYHLILPKEMDKDFNR 480


>sp|P34528|YM67_CAEEL Putative serine protease K12H4.7
           OS=Caenorhabditis elegans GN=K12H4.7 PE=1 SV=2
          Length = 510

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 414 DHVFHRTGEVFSQRFSHNHQSYVAMPAQVGSPTFLGPAG-SRESGYF 277
           DH     G+ F QR+ HN+Q Y A     G P FL   G   ES Y+
Sbjct: 68  DHFDSSVGKTFQQRYYHNNQWYKA-----GGPAFLMLGGEGPESSYW 109


>sp|Q6T264|MAML1_MOUSE Mastermind-like protein 1 OS=Mus musculus
           GN=Maml1 PE=1 SV=2
          Length = 1020

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 258 SGNYVKQNNQIPDYQLGQEKWETLLEQALQHKTDD 362
           +G  V Q+N +PD  L +++W+ L+E+  +   D+
Sbjct: 238 AGGSVAQSNLMPDLNLNEQEWKELIEELNRSVPDE 272


>sp|A6W961|T23O_KINRD Tryptophan 2,3-dioxygenase OS=Kineococcus
           radiotolerans (strain ATCC BAA-149 / DSM 14245 /
           SRS30216) GN=kynA PE=3 SV=1
          Length = 286

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 82  LLSKEILTAHQHTPLCIMIFRVIH 11
           LL +++  AH HTP  +  FRVI+
Sbjct: 189 LLERDVTKAHVHTPALVATFRVIY 212


>sp|Q6D0B9|NHAA_ERWCT Na(+)/H(+) antiporter nhaA OS=Erwinia
           carotovora subsp. atroseptica GN=nhaA PE=3 SV=1
          Length = 393

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -1

Query: 377 SAFLIIISLMLQCLLK*GLPLFLAQLVVGNLVILLDVVARFSACTSADH 231
           SA+L++  ++  C+LK G+   LA ++VG  + L       S  TS +H
Sbjct: 207 SAYLLVGGVLWVCILKCGVHATLAGVIVGFFIPLRTSDGEPSPATSLEH 255


>sp|A6QP75|AL2CL_BOVIN ALS2 C-terminal-like protein OS=Bos taurus
           GN=ALS2CL PE=2 SV=1
          Length = 953

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 237 STRAGRKSGNYVKQNNQIPDYQLGQEKWETLLEQALQHKTDDYEKSAAKKLL 392
           S+R  RKS  Y+      P+ Q G  + E LLE+ LQH+  +  +   +K L
Sbjct: 629 SSRELRKSQEYLCCERTCPEDQAG--RMEDLLEELLQHREPEALQQCLRKAL 678
tr_hit_id B6PGC5
Definition tr|B6PGC5|B6PGC5_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 63
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915653|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_B06.
         (422 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6PGC5|B6PGC5_BRAFL Putative uncharacterized protein (Fragmen...    35   1.4  
tr|B0C7I0|B0C7I0_ACAM1 Universal stress protein OS=Acaryochloris...    35   1.8  
tr|Q2NWP5|Q2NWP5_SODGM Putative uncharacterized protein OS=Sodal...    33   5.4  
tr|A6Q682|A6Q682_SULNB Type II secretion system protein D OS=Sul...    33   5.4  
tr|B0TRN4|B0TRN4_SHEHH Radical SAM domain protein OS=Shewanella ...    33   7.0  
tr|Q9Z636|Q9Z636_STRPN UDP-N-acetylglucosamine 2-epimerase OS=St...    33   7.0  
tr|B0W357|B0W357_CULQU Translational activator gcn1 OS=Culex qui...    33   9.2  

>tr|B6PGC5|B6PGC5_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_249620 PE=4 SV=1
          Length = 1715

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
 Frame = -1

Query: 383 FRSAFLII--------ISLMLQCLLK*G---LPLFLAQLVVGNLVILLDVVARFSACTSA 237
           F  +FLII        I  M  C+L  G   +PLF+  +++GNLVIL   +A   +C SA
Sbjct: 730 FLHSFLIIFRVLCGEWIENMWVCMLVNGWACIPLFILSMIIGNLVILNLFLALLLSCFSA 789

Query: 236 DHL 228
           D L
Sbjct: 790 DSL 792


>tr|B0C7I0|B0C7I0_ACAM1 Universal stress protein OS=Acaryochloris
           marina (strain MBIC 11017) GN=AM1_6334 PE=4 SV=1
          Length = 167

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 255 KSGNYVKQNNQIPDYQLGQEKWETLLEQALQHKTDDYEKSAAKKLLPSCET 407
           K  NY    +   D Q  Q+KWET +EQA +     Y+++  + +L +CE+
Sbjct: 59  KGANYFTPYDDA-DLQFAQQKWETQIEQANEWLLQYYQQATQRGVLATCES 108


>tr|Q2NWP5|Q2NWP5_SODGM Putative uncharacterized protein OS=Sodalis
           glossinidius (strain morsitans) GN=SG0155 PE=4 SV=1
          Length = 648

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 183 AYHHGQTSVGKK*FT*MVSTRAGRKSGN-YVKQNNQIPDYQLGQEKWETLLEQAL 344
           AY  GQT+V         +  AG + GN +   +N++P    G  KW TLLE  L
Sbjct: 353 AYRPGQTAVEVMESAEHAAREAGLQGGNGWSVYDNRVPQQARGNVKWRTLLENTL 407


>tr|A6Q682|A6Q682_SULNB Type II secretion system protein D
           OS=Sulfurovum sp. (strain NBC37-1) GN=SUN_0030 PE=3 SV=1
          Length = 678

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 252 RKSGNYVKQNNQIPDYQLGQEKWETLLEQALQHKTDDYEKSAAKKLLPSCE 404
           RKSG+  K    + + +  Q ++  L+EQAL+     +  S AK L+P  E
Sbjct: 600 RKSGDLQKLKEMLAELEEVQVRYNRLVEQALEKNKGKHHSSPAKALVPKTE 650


>tr|B0TRN4|B0TRN4_SHEHH Radical SAM domain protein OS=Shewanella
           halifaxensis (strain HAW-EB4) GN=Shal_1887 PE=4 SV=1
          Length = 414

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 291 PDYQLGQEKWETLLEQALQHKTDDYEKSAAKKLLPSCETHDLIF 422
           PDY+LG      L E A   K +D+ +  +  L P C+  D +F
Sbjct: 308 PDYKLGNINDHQLDEMAFSKKQEDFGRGKSTTLTPQCQRCDYLF 351


>tr|Q9Z636|Q9Z636_STRPN UDP-N-acetylglucosamine 2-epimerase
           OS=Streptococcus pneumoniae GN=cps19CK PE=3 SV=1
          Length = 361

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 253 ENLATTSSKITRFPTTSWAKKSGRPYLSRHCNIRLMIMRKALRKNFSRPVKHM 411
           EN+  T + +    TT+  K    P L  + N RL+++    R+N   P+KHM
Sbjct: 162 ENVYVTGNTVIDALTTTVQKDYTHPDLDLNVNTRLILLTAHRRENLGEPMKHM 214


>tr|B0W357|B0W357_CULQU Translational activator gcn1 OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ001363 PE=4 SV=1
          Length = 2651

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = -3

Query: 183 QMLIYSSNTVEGQCEWLYRA*LYCVSRISPNLYHYCLRKF*QLISTHHCVL*YSGLF 13
           ++L+   + V+G+ E LY+A +YCV+     +  YCL +  +++++ + +     LF
Sbjct: 542 KLLLNHLDNVKGEVEALYKAVVYCVNSHHKKVRKYCLPRLERIVNSSNGITLAKSLF 598