BP915659 |
Clone id |
YMU001_000074_C01 |
Library |
YMU01 |
Length |
514 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000074_C01. |
Accession |
BP915659 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4079Contig1 |
Sequence |
CTGAAAAGAACTACAAATATCTGGGCCAAGCAGGTCCTAGTACTCCAAGAAAAAGGTGGG AGTCAACCCATCCTCACCTGGACAGCTACCATGAGGGAGGGCCCTAAGATCCGTGTGTAT CTCCTCAAGCTCTAGTGGCATCTCTAGCCTCTGGCGCATCTCCTCTATCACAAGACAAGG CATCTGTGCCCAAACCGGCTCCCTACATGCATCCTGTCGCTCTTACTGGGGCTCAGCCGA CAGTAACTCACAGTAAAAGTCAGTAGCAATTTCACGCATATCCTCGGGCTCACAAGCAAC TAACCCATCGGGCCTCCTCAACTGATTGACCTTGGCATGCGAGTGTCGAGGTCCCACTGT CTCAAAAAAAGCACCTGTCACTTTGTCACCCACCTGAGTCGACTGAGATGCCTGTCGGTG GAAGGAAAACTCATGACGCCTCTCCTCTCTGCTAGCAAGCTCCTGTCGAGCCTAATGTAA CTGCTCCTCCAACCATGGACTATCTAAATGCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14381 |
Definition |
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis |
Align length |
123 |
Score (bit) |
73.6 |
E-value |
5.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q76IM5 |
Definition |
tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridis |
Align length |
124 |
Score (bit) |
58.5 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915659|Adiantum capillus-veneris mRNA, clone: YMU001_000074_C01. (514 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridi... 59 2e-07 tr|Q9FL83|Q9FL83_ARATH Non-LTR retroelement reverse transcriptas... 55 3e-06 tr|A9S580|A9S580_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05 tr|O82216|O82216_ARATH Putative non-LTR retroelement reverse tra... 50 5e-05 tr|O64473|O64473_ARATH Putative non-LTR retroelement reverse tra... 50 5e-05 tr|A2ZX68|A2ZX68_ORYSJ Putative uncharacterized protein OS=Oryza... 50 9e-05 tr|Q76IL9|Q76IL9_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 49 1e-04 tr|Q5W742|Q5W742_ORYSJ Putative uncharacterized protein OJ1005_D... 49 1e-04 tr|A3BHU0|A3BHU0_ORYSJ Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|Q76IM7|Q76IM7_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2... 47 4e-04 tr|Q0D4Q0|Q0D4Q0_ORYSJ Os07g0613900 protein OS=Oryza sativa subs... 47 6e-04 tr|A3BM55|A3BM55_ORYSJ Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|O65244|O65244_ARATH F21E10.5 protein OS=Arabidopsis thaliana ... 47 7e-04 tr|Q9ZQF8|Q9ZQF8_ARATH Putative non-LTR retroelement reverse tra... 46 0.001 tr|Q94LS2|Q94LS2_ORYSJ Putative reverse transcriptase OS=Oryza s... 46 0.001 tr|Q337N6|Q337N6_ORYSJ Retrotransposon protein, putative, LINE s... 46 0.001 tr|A3BDS3|A3BDS3_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|A3B2Q9|A3B2Q9_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|A2ZWA4|A2ZWA4_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|Q2QWF4|Q2QWF4_ORYSJ Retrotransposon protein, putative, unclas... 46 0.001 tr|B8A767|B8A767_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001 tr|B2BXY9|B2BXY9_9BRAS Non-LTR reverse transcriptase OS=Arabidop... 46 0.001 tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse tra... 44 0.004 tr|Q53LX4|Q53LX4_ORYSJ Retrotransposon protein, putative, unclas... 44 0.004 tr|Q2R9J3|Q2R9J3_ORYSJ Retrotransposon protein, putative, unclas... 44 0.004 tr|A3C9D9|A3C9D9_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.004 tr|A5C2K8|A5C2K8_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|Q9FW98|Q9FW98_ORYSJ Putative non-LTR retroelement reverse tra... 44 0.006 tr|Q7XUD8|Q7XUD8_ORYSJ OSJNBa0088A01.7 protein OS=Oryza sativa s... 44 0.006 tr|Q7XCU0|Q7XCU0_ORYSJ Retrotransposon protein, putative, unclas... 44 0.006
>tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridis GN=ORF2 PE=4 SV=1 Length = 1318
Score = 58.5 bits (140), Expect = 2e-07 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Frame = -2
Query: 372 AFFETVGPRHSHAK-VNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ERQDACREP 196 +FF + RH K ++ L G EP +R+ AT+FY L S+E + ER+D E Sbjct: 396 SFFFGLEKRHGQRKAIHCLLSDTGQELTEPGQLRKRATEFYSALYSSEYR-EREDLFEE- 453
Query: 195 VWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY*DLLGPDI 16 +P V E RL+ PL + E+H L+ + PG +GLT F+ Y D++ PD+ Sbjct: 454 FCGGLP-QVSEATNVRLDGPLSVSELHAALQRMQGRRAPGINGLTVEFYKAYWDIVAPDL 512
Query: 15 CSSF 4 F Sbjct: 513 LEVF 516
>tr|Q9FL83|Q9FL83_ARATH Non-LTR retroelement reverse transcriptase-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 1223
Score = 54.7 bits (130), Expect = 3e-06 Identities = 35/132 (26%), Positives = 60/132 (45%) Frame = -2
Query: 396 QVGDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ER 217 QVGD+ T AF R +H + ++ DG+V + ++++ A F+ E L P + Sbjct: 367 QVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFLQLIPN-DF 425
Query: 216 QDACREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY* 37 + + +P + +Q L P+ EEI L +P PG DG T FF Sbjct: 426 EGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATW 485
Query: 36 DLLGPDICSSFQ 1 +++G + + Q Sbjct: 486 EIIGDEFTLAVQ 497
>tr|A9S580|A9S580_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74748 PE=4 SV=1 Length = 286
Score = 51.2 bits (121), Expect = 3e-05 Identities = 32/125 (25%), Positives = 53/125 (42%) Frame = -2
Query: 381 VTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ERQDACR 202 +T FF V + + +L+ +G M +I +F +L +A P+ + Sbjct: 1 MTKEFFHIVRKKLVRNTIIKLQNSEGTHGTNHSAMEQICINFCHQLYAARPRDDSVLRAE 60
Query: 201 EPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY*DLLGP 22 E + A +P + Q L PL E++ L H PG DG+ FF+ Y D + Sbjct: 61 EAILATLPTTLSPTAAQLLGQPLMEHEVYVAAIELAHDKAPGLDGVAVQFFIIYWDQISQ 120
Query: 21 DICSS 7 D C + Sbjct: 121 DYCEN 125
>tr|O82216|O82216_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g23880 PE=2 SV=1 Length = 1216
Score = 50.4 bits (119), Expect = 5e-05 Identities = 31/133 (23%), Positives = 61/133 (45%) Frame = -2
Query: 399 TQVGDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*E 220 T VGD+ F + R + + ++ DGLV +D++ A +++ + L P + Sbjct: 87 TDVGDRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPA-D 145
Query: 219 RQDACREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY 40 + C E + +P E+ + L + EEI + ++P PG DG T F+ Sbjct: 146 YEGMCVEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKAS 205
Query: 39 *DLLGPDICSSFQ 1 +++G ++ + Q Sbjct: 206 WEIIGDEVIIAIQ 218
>tr|O64473|O64473_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g19100 PE=2 SV=1 Length = 1447
Score = 50.4 bits (119), Expect = 5e-05 Identities = 34/130 (26%), Positives = 58/130 (44%) Frame = -2
Query: 390 GDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ERQD 211 GDK AF V R + +++++ DG V + ++++ A F+ E L P E + Sbjct: 777 GDKNNKAFHRAVVTREAQNSISEIQCQDGSVTAKGDEIKAYAERFFREFLQLIPN-EYEG 835
Query: 210 ACREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY*DL 31 + +P E + L + EEI L ++P+ PG DG T FF ++ Sbjct: 836 VTMADLQDLLPFRCSETEHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEI 895
Query: 30 LGPDICSSFQ 1 LG + + Q Sbjct: 896 LGNEFILAIQ 905
>tr|A2ZX68|A2ZX68_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003140 PE=4 SV=1 Length = 744
Score = 49.7 bits (117), Expect = 9e-05 Identities = 32/127 (25%), Positives = 56/127 (44%) Frame = -2
Query: 396 QVGDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ER 217 Q GD+ T F + R ++ +L + DG + M + TD+Y L +++ Sbjct: 27 QYGDRNTRFFHQFASERKRANRIRKLVKEDGSAVVNQDGMCSLVTDYYRTLFTSQ----- 81
Query: 216 QDACREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY* 37 Q + + Q+P V + M L P EEI L ++ PG DG+ F+ + Sbjct: 82 QGTRYDELLQQVPTKVTDAMNMELMKPYSDEEIKNALFSMGDLKAPGLDGMPALFYKNFW 141
Query: 36 DLLGPDI 16 + +G D+ Sbjct: 142 EKVGLDV 148
>tr|Q76IL9|Q76IL9_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4 SV=1 Length = 1267
Score = 49.3 bits (116), Expect = 1e-04 Identities = 35/123 (28%), Positives = 56/123 (45%) Frame = -2
Query: 387 DKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ERQDA 208 D T FF + + L+ DG +P MR +A +Y L +AE E+ Sbjct: 389 DGPTSYFFNLEKKKGQEKLMFVLKDDDGQDTSDPVLMRRLAVRYYSNLFAAETTDEQS-- 446
Query: 207 CREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY*DLL 28 R + +P L + ++ LE+ + EE+ + L G+ PG DGL+ FF + L+ Sbjct: 447 -RNELLQDIPSLTSTQ-KELLEVDFKFEEVTAAVMDLSSGTAPGIDGLSSEFFKTFWTLI 504
Query: 27 GPD 19 G D Sbjct: 505 GAD 507
>tr|Q5W742|Q5W742_ORYSJ Putative uncharacterized protein OJ1005_D04.4 (Putative uncharacterized protein OJ1675_H07.11) OS=Oryza sativa subsp. japonica GN=OJ1005_D04.4 PE=4 SV=1 Length = 796
Score = 49.3 bits (116), Expect = 1e-04 Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 2/124 (1%) Frame = -2
Query: 414 QASQSTQV--GDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELL 241 Q SQ T + GDK T F R KV +LRRP+G + ++M E+A DF+ L Sbjct: 672 QRSQITWLKEGDKNTKYFHLKASWRARKNKVKKLRRPNGSLVSNEKEMGEVARDFFQNLY 731
Query: 240 SAEPQ*ERQDACREPVWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLT 61 + + + ++ + EM + L P EEI L + H PG DG Sbjct: 732 MKDENLDPTE-----LFNLFQTKITAEMNESLMKPFSEEEIGDVLFQIGHLKAPGSDGFP 786
Query: 60 PTFF 49 FF Sbjct: 787 AHFF 790
>tr|A3BHU0|A3BHU0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022612 PE=4 SV=1 Length = 634
Score = 47.8 bits (112), Expect = 3e-04 Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Frame = -2
Query: 396 QVGDKVTGAFFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEPQ*ER 217 Q GD+ T F R ++ +LR+ DG + E+ ++ T+++ +L S+ Sbjct: 190 QQGDRNTSFFHAACSERRRSNRIGRLRKDDGGWVEQEEEKKQFITNYFMQLFSS------ 243
Query: 216 QDACREP--VWAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLE 43 + R+P + +P + EM + L EE+ L + PG DG+ F+ Sbjct: 244 -NGVRDPRQILEAVPQRINAEMNEELTRDFSEEEVKKALDNIGDLKAPGPDGMPSLFYKR 302
Query: 42 Y*DLLGPDI 16 + D++G + Sbjct: 303 FWDVVGDQV 311
>tr|Q76IM7|Q76IM7_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2 PE=4 SV=1 Length = 1234
Score = 47.4 bits (111), Expect = 4e-04 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Frame = -2
Query: 369 FFETVGPRHSHAKVNQLRRPDGLVACEPEDMREIATDFYCELLSAEP-Q*ERQDACREPV 193 FF R + ++ L G EP +++ A +F+ L +E + + + CRE Sbjct: 374 FFGLEKKRGQNRVIHPLFLGTGHELVEPGQIKKRAVEFFSSLYESEYCEDDVDEFCRE-- 431
Query: 192 WAQMPCLVIEEMRQRLEMPLELEEIHTDLRALPHGSCPGEDGLTPTFFLEY*DLLGPDIC 13 +P V +E L+ PL+L+E++ DL + PG DGLT F+ + D++ D+ Sbjct: 432 ---LP-RVSDETNSWLDRPLQLDELNADLHGMQGRRAPGVDGLTVEFYRAFWDIVAHDML 487
Query: 12 SSF 4 F Sbjct: 488 EVF 490
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