BP915664
Clone id YMU001_000074_C07
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTACAAACTATTGATCCAATTGGTGGTGCACCGGTGCAGCAGTTTGTTCATGGAATGATC
AACTCACAGCAAAGGCCTGGCCCAGCTTTAGGGCAAAAGAACATCGGAAGCTTAGGTTTG
AACATGAGAAATGCAGAGGGAATGCTAGCAACTAGCTTATCGAGAAGCTTACCAGGATTC
AATACCTCTATTGACAGTGTCAGTGGTCAGCCAGCGGGGACAGGTCCCATATCTGAAGCT
CGCCAGCAGCAACTTTAGGCAGGAAGTTGATTTGATACAATGGTTTAGCTAATAAACTTT
TGGATTGAGGAAAGCTGACAACTTGAACCAGAGATTTTTTTCTAGCTTCAGTTTTAGTTT
TAAGAGGTTTGAGAATTTAGAAAGAGGATGAGGCTGTAGCAAGGACAGAAGTTGTTCCAG
AATGAGAATGAGATTGTAGGTTGCAAGGTGTAGAGATACATTGTCCTCTCCTTGCACCAA
GACCA
■■Homology search results ■■ -
sp_hit_id P21822
Definition sp|P21822|MCPS_ENTAE Methyl-accepting chemotaxis serine transducer OS=Enterobacter aerogenes
Align length 60
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915664|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_C07.
(485 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P21822|MCPS_ENTAE Methyl-accepting chemotaxis serine transduc... 32 1.2
sp|Q5RFQ1|SSXT_PONAB Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2 32 1.5
sp|Q15532|SSXT_HUMAN Protein SSXT OS=Homo sapiens GN=SS18 PE=2 SV=3 32 1.5
sp|Q9H788|SH24A_HUMAN SH2 domain-containing protein 4A OS=Homo s... 30 5.7

>sp|P21822|MCPS_ENTAE Methyl-accepting chemotaxis serine transducer
OS=Enterobacter aerogenes GN=tse PE=3 SV=1
Length = 557

Score = 32.3 bits (72), Expect = 1.2
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1

Query: 73 RPGPALGQKNIGSLGLNMRNAEGMLATSLSRSLPGFNTSIDSVSGQPAGTGPISEARQQQ 252
+P P + IG L ++++ + L ++S G + SID S AG +S +QQ
Sbjct: 241 QPIPVTSRNEIGVLAASLKHMQNELIETVSGVRQGADRSIDGASESAAGNNDLSSRTEQQ 300


>sp|Q5RFQ1|SSXT_PONAB Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2
Length = 418

Score = 32.0 bits (71), Expect = 1.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1

Query: 19 IGGAPVQQFVHGMINSQQRPGPA-LGQKNIGSLGLNMRNAEGMLATSLSRSLPGFNTSID 195
+GG P + +N Q PGP + + G LNM N+ + +S S+ G+N S+
Sbjct: 110 VGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVP 168

Query: 196 SVSGQP 213
S P
Sbjct: 169 SSQSMP 174


>sp|Q15532|SSXT_HUMAN Protein SSXT OS=Homo sapiens GN=SS18 PE=2 SV=3
Length = 418

Score = 32.0 bits (71), Expect = 1.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1

Query: 19 IGGAPVQQFVHGMINSQQRPGPA-LGQKNIGSLGLNMRNAEGMLATSLSRSLPGFNTSID 195
+GG P + +N Q PGP + + G LNM N+ + +S S+ G+N S+
Sbjct: 110 VGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVP 168

Query: 196 SVSGQP 213
S P
Sbjct: 169 SSQSMP 174


>sp|Q9H788|SH24A_HUMAN SH2 domain-containing protein 4A OS=Homo
sapiens GN=SH2D4A PE=1 SV=1
Length = 454

Score = 30.0 bits (66), Expect = 5.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1

Query: 73 RPGPALGQKNIGSLGLNMRNAEGMLATSLSR 165
RP P L ++ I SL + RN + MLA S++R
Sbjct: 160 RPAPTLEEEKIRSLSSSSRNIQQMLADSINR 190


tr_hit_id A0LQF9
Definition tr|A0LQF9|A0LQF9_SYNFM Extracellular ligand-binding receptor OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Align length 43
Score (bit) 37.0
E-value 0.48
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915664|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_C07.
(485 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0LQF9|A0LQF9_SYNFM Extracellular ligand-binding receptor OS=... 37 0.48
tr|Q6H972|Q6H972_ANTMA SEU3A protein OS=Antirrhinum majus PE=2 SV=1 35 2.4
tr|Q6H970|Q6H970_ANTMA SEU3B protein (Fragment) OS=Antirrhinum m... 34 3.1
tr|B2W3N9|B2W3N9_PYRTR MAK32-like protein OS=Pyrenophora tritici... 34 4.1
tr|A2DIB7|A2DIB7_TRIVA Putative uncharacterized protein OS=Trich... 33 5.3
tr|B5I174|B5I174_9ACTO Transcriptional regulator OS=Streptomyces... 33 7.0
tr|Q0UQG8|Q0UQG8_PHANO Putative uncharacterized protein OS=Phaeo... 33 7.0
tr|B2AP94|B2AP94_PODAN Predicted CDS Pa_7_360 OS=Podospora anser... 33 7.0

>tr|A0LQF9|A0LQF9_SYNFM Extracellular ligand-binding receptor
OS=Syntrophobacter fumaroxidans (strain DSM 10017 /
MPOB) GN=Sfum_3994 PE=4 SV=1
Length = 339

Score = 37.0 bits (84), Expect = 0.48
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -2

Query: 370 KPLKTKTEARKKSLVQVVSFPQSKSLLAKPLYQINFLPKVAAG 242
KPL K +A K +V ++S+ +LL K ++NF PKV AG
Sbjct: 213 KPLLGKAKAAKPDVVYMISYVHEAALLMKQSKELNFAPKVFAG 255


>tr|Q6H972|Q6H972_ANTMA SEU3A protein OS=Antirrhinum majus PE=2 SV=1
Length = 901

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1

Query: 34 VQQFVHGMINSQQRPGPALGQKNIGSLGLNMRNAEGMLATSLSRSLPGFNTSIDS--VSG 207
VQ+ +H M+ S Q G G +G++G +M+N ML+++ + S+ G N + + +G
Sbjct: 761 VQKIIHDMMMSSQLSGG--GMMGMGNMGSDMKNVNVMLSSNNNASMNGSNILVGNGMANG 818

Query: 208 QPAGTG 225
+G G
Sbjct: 819 NMSGPG 824


>tr|Q6H970|Q6H970_ANTMA SEU3B protein (Fragment) OS=Antirrhinum
majus PE=2 SV=1
Length = 297

Score = 34.3 bits (77), Expect = 3.1
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1

Query: 34 VQQFVHGMINSQQRPGPALGQKNIGSLGLNMRNAEGMLATSLSRSLPGFNTSIDS--VSG 207
VQ+ +H M+ S Q G G + ++G +++N GML+++ + S+ G N + + +G
Sbjct: 158 VQKIIHDMMMSSQLSGG--GMMGMSNMGSDVKNVNGMLSSNNNASMNGSNILVGNGMANG 215

Query: 208 QPAGTG 225
+G G
Sbjct: 216 NMSGPG 221


>tr|B2W3N9|B2W3N9_PYRTR MAK32-like protein OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_05089 PE=4
SV=1
Length = 358

Score = 33.9 bits (76), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3

Query: 24 WCTGAAVCSWNDQLTAKAWPSFRAKEHRKLRFEHEKCRGN 143
W TG + D+LT + W + KEHR R+ K R N
Sbjct: 83 WDTGVLIRETPDRLTTRGWNGYGEKEHRAFRYLTPKLRLN 122


>tr|A2DIB7|A2DIB7_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_130210 PE=4 SV=1
Length = 457

Score = 33.5 bits (75), Expect = 5.3
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3

Query: 69 AKAWPSFRAKEHRKLRFEHEK 131
AKAWP+FR + H+ LR EH+K
Sbjct: 226 AKAWPNFRIEAHKILRKEHQK 246


>tr|B5I174|B5I174_9ACTO Transcriptional regulator OS=Streptomyces
sviceus ATCC 29083 GN=SSEG_05319 PE=4 SV=1
Length = 216

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2

Query: 134 QREC*QLAYREAYQDSIPLLTVSVVSQRGQVPYLKLASSNFRQEVDLI 277
QRE A+RE YQD P+ ++ + R ++P +A S+F + VDL+
Sbjct: 150 QREADHRAWREVYQDLDPVAYPALTAVRRELP--GMADSSFEEAVDLL 195


>tr|Q0UQG8|Q0UQG8_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_05996 PE=4 SV=1
Length = 347

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3

Query: 24 WCTGAAVCSWNDQLTAKAWPSFRAKEHR-------KLRFEHE 128
W TG + D+LT + W + A EHR KLR +HE
Sbjct: 77 WQTGVVMRETPDRLTTRGWNGYGANEHRAFKYMTPKLRLDHE 118


>tr|B2AP94|B2AP94_PODAN Predicted CDS Pa_7_360 OS=Podospora anserina
PE=4 SV=1
Length = 742

Score = 33.1 bits (74), Expect = 7.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1

Query: 124 MRNAEGMLATSLSRSLPGFNTSIDSVSGQPAGTGPISEA 240
+ N G+ +TS ++PG TS + S P+ +GP+ E+
Sbjct: 264 VENGSGLFSTSPQATMPGRTTSTFTTSAPPSASGPVGES 302