BP915670 |
Clone id |
YMU001_000074_D05 |
Library |
YMU01 |
Length |
601 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000074_D05. |
Accession |
BP915670 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3555Contig1 |
Sequence |
CTCTCTCAAAACGAGAGAGTTGAGATAATGTAAAAAAAACTAGCACCATACACATCCAAA CTCCTTGCTCGATACGAGCCAGGGAGGCAAAAATAATTACAAGTTGTTCAAAAGCACCAC CTAATATGAGTCCATAACCGGGCTTTTACAAGGAAGCCACTACAGACACATAACGTCAAG CTAGATCCCATTGGATGCCACCACCTTATTATTGAACCTTTTGAATCAGTACTAGATCAA TACAAAGTATGGTAGAAAATACTCCATGGTTTGACAAATTTAGAACTTCCTTGCAAATTT GGTGATACTATTATTATTTTCATCCAACTAACATGATCTTCCCACCACGAGCCTCTTTTT TACTTTCACGAAGAGCTTCTCCAAAGTTTTCAAGTGGGAAGGATTTCCCAGGCAAGGGTG TCAAAATCTTGTTTGTCAAAAGAGTCATCACTTGCACCGCTGTATCATCCACCTTTGTTT CATTCCTCAAGTAGTTTGACAATAGCCACCACCTTATGCGTACACCTCTCATGAGGTCCA ACGTGCTCAGACTTATATTCCACCCAGATAGCACTCCATACACATATATAGTTCCATCAT G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8JFV8 |
Definition |
sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio |
Align length |
88 |
Score (bit) |
36.2 |
E-value |
0.13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0G0 |
Definition |
tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
90 |
Score (bit) |
81.3 |
E-value |
4.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915670|Adiantum capillus-veneris mRNA, clone: YMU001_000074_D05. (601 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea... 81 4e-14 tr|A9RRC5|A9RRC5_PHYPA Predicted protein OS=Physcomitrella paten... 77 6e-13 tr|A9T5D5|A9T5D5_PHYPA Predicted protein OS=Physcomitrella paten... 68 4e-10 tr|A5UWK7|A5UWK7_ROSS1 Alcohol dehydrogenase, zinc-binding domai... 45 0.004 tr|A7NF67|A7NF67_ROSCS Alcohol dehydrogenase zinc-binding domain... 44 0.009 tr|Q1YPC8|Q1YPC8_9GAMM NADPH quinone reductase or Zn-dependent o... 40 0.14 tr|A0Z6U1|A0Z6U1_9GAMM Probable nuclear receptor binding factor ... 40 0.14 tr|A3HTE6|A3HTE6_9SPHI NADPH quinone reductase or Zn-dependent o... 39 0.23 tr|A8J6Y3|A8J6Y3_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.23 tr|Q2JZT1|Q2JZT1_RHIEC Probable zinc-dependent oxidoreductase pr... 38 0.40 tr|B1G9J9|B1G9J9_9BURK Alcohol dehydrogenase zinc-binding domain... 38 0.40 tr|A0CJM4|A0CJM4_PARTE Chromosome undetermined scaffold_2, whole... 38 0.40 tr|Q1D9C2|Q1D9C2_MYXXD Oxidoreductase, zinc-binding dehydrogenas... 37 0.68 tr|Q1CZD1|Q1CZD1_MYXXD Oxidoreductase, zinc-binding dehydrogenas... 37 0.88 tr|Q8VQC9|Q8VQC9_MYXXA Putative oxidoreductase OS=Myxococcus xan... 37 0.88 tr|Q4KME8|Q4KME8_DANRE Vesicle amine transport protein 1 homolog... 36 1.5 tr|B3Q4G8|B3Q4G8_RHIE6 Probable zinc-dependent oxidoreductase pr... 36 1.5 tr|Q5CR44|Q5CR44_CRYPV Putative uncharacterized protein OS=Crypt... 36 1.5 tr|Q582N8|Q582N8_9TRYP Oxidoreductase, putative OS=Trypanosoma b... 36 2.0 tr|B5ZZZ7|B5ZZZ7_RHILW Alcohol dehydrogenase GroES domain protei... 35 2.6 tr|A4FI68|A4FI68_SACEN Quinone oxidoreductase OS=Saccharopolyspo... 35 3.4 tr|A9EEL6|A9EEL6_9RHOB Nuclear receptor binding factor related p... 35 3.4 tr|Q93CP0|Q93CP0_9BURK Putative oxidoreductase OS=Burkholderia s... 35 4.4 tr|Q5CKB5|Q5CKB5_CRYHO Putative uncharacterized protein (Fragmen... 35 4.4 tr|B2UAD0|B2UAD0_RALPJ Beta-ketoacyl synthase OS=Ralstonia picke... 34 5.7 tr|B5WLB2|B5WLB2_9BURK Beta-ketoacyl synthase OS=Burkholderia sp... 34 7.5 tr|A4BRG8|A4BRG8_9GAMM Fe(III)-pyochelin receptor OS=Nitrococcus... 34 7.5 tr|Q4FXV3|Q4FXV3_LEIMA Putative uncharacterized protein OS=Leish... 34 7.5 tr|Q23RK3|Q23RK3_TETTH Oxidoreductase, zinc-binding dehydrogenas... 34 7.5 tr|A4I4G0|A4I4G0_LEIIN Putative uncharacterized protein OS=Leish... 34 7.5
>tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 336
Score = 81.3 bits (199), Expect = 4e-14 Identities = 35/90 (38%), Positives = 59/90 (65%) Frame = -1
Query: 595 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 416 GT+++YG L ++ + DLMR V++ WW L+ + +E ++ L+ K++TP Sbjct: 246 GTVFIYGTLGSSDVVVGIDDLMREVKVSWWNLNAFAEDEDNKKKCISDMLKLMDQKVITP 305
Query: 415 LPGKSFPLENFGEALRESKKEARGGKIMLV 326 L G++F L+ FG+A+ ES+K ARGGKI+L+ Sbjct: 306 LAGRTFTLDEFGKAIIESEKYARGGKILLI 335
>tr|A9RRC5|A9RRC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160552 PE=4 SV=1 Length = 380
Score = 77.4 bits (189), Expect = 6e-13 Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%) Frame = -1
Query: 595 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 416 G ++VYG L GW+I++S LDL+R V I+++ L+ +L + VM L +L P Sbjct: 263 GKVFVYGTLGGWDITVSKLDLIRNVEIKYYRLTRWLEKGNNKEKVMRDVMRYLEAGVLVP 322
Query: 415 LPGKSFPLENFGEALRESKKEARGGKIML---VG*K***YHQICKEVLN 278 GK F LE+F A+ ES+++ARGGK+M +G K + ++C+ V N Sbjct: 323 NFGKKFDLEDFRAAICESERQARGGKVMTRAKLGRKHRIHVKVCQAVRN 371
>tr|A9T5D5|A9T5D5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191779 PE=4 SV=1 Length = 332
Score = 68.2 bits (165), Expect = 4e-10 Identities = 32/89 (35%), Positives = 53/89 (59%) Frame = -1
Query: 595 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 416 G + VYGVLS + +++ DL RGV + W+L N+ + K + V LL K++ P Sbjct: 242 GQVLVYGVLSSVDATVAITDLFRGVHVTGWILYNFSPDPAKRQEYIENVAKLLEEKVIVP 301
Query: 415 LPGKSFPLENFGEALRESKKEARGGKIML 329 L G+ F L +F A+ ++++ RGGK++L Sbjct: 302 LEGEKFDLADFKAAMNKTEEVGRGGKVLL 330
>tr|A5UWK7|A5UWK7_ROSS1 Alcohol dehydrogenase, zinc-binding domain protein OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_2636 PE=4 SV=1 Length = 326
Score = 44.7 bits (104), Expect = 0.004 Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 3/94 (3%) Frame = -1
Query: 595 GTIYVYGVLSGWNISLST-LDLMRGVRIRWWLLSNYLRNET--KVDDTAVQVMTLLTNKI 425 GT+ VYG ++G ++++ + L R IR W L+++ ++ T +V + L+ + Sbjct: 233 GTMLVYGAIAGESLTIHPGMLLFRSATIRGWWLTHWFQSATPSQVQSLFDTLFRLIGDGT 292
Query: 424 LTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 323 L+ + L + EA+RE++++ R GK++LVG Sbjct: 293 LSTPIVAEYDLADVREAVREAERKTRPGKVLLVG 326
>tr|A7NF67|A7NF67_ROSCS Alcohol dehydrogenase zinc-binding domain protein OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=Rcas_2212 PE=4 SV=1 Length = 326
Score = 43.5 bits (101), Expect = 0.009 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Frame = -1
Query: 595 GTIYVYGVLSG--WNISLSTLDLMRGVRIRWWLLSNYLRNET--KVDDTAVQVMTLLTNK 428 GT+ VYG ++G I L TL L R IR W LS++L+ T + D + L+ + Sbjct: 233 GTMLVYGAIAGEPLTIHLGTL-LFRSATIRGWWLSHWLQTATPEQAQDLFTTLFGLIADG 291
Query: 427 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 323 L + L + EA+ ++ + R GK++LVG Sbjct: 292 TLHTPVAAEYDLGDVREAVIAAEHKTRPGKVLLVG 326
>tr|Q1YPC8|Q1YPC8_9GAMM NADPH quinone reductase or Zn-dependent oxidoreductase OS=gamma proteobacterium HTCC2207 GN=GB2207_03040 PE=4 SV=1 Length = 361
Score = 39.7 bits (91), Expect = 0.14 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Frame = -1
Query: 601 HDGTIYVYGVLSGWNISLST-LDLMRGVRIR-WWLLSNYLRNETKVDDTAV-QVMTLLTN 431 + GT+ YGVLSG S++T + + +R +WL Y + K A Q++ L+ Sbjct: 263 YGGTLVAYGVLSGQPASVNTGKVIFNDISLRGFWLYKWYQTADMKTKQAAFGQIIPLIAQ 322
Query: 430 KILTPLPGKSFPLENFGEALRESKKEARGGKIMLV 326 +L F ++ EA+ + R GK+++V Sbjct: 323 GVLKANVDSRFSIDQIEEAVSRAAAPGRNGKVLIV 357
>tr|A0Z6U1|A0Z6U1_9GAMM Probable nuclear receptor binding factor related protein OS=marine gamma proteobacterium HTCC2080 GN=MGP2080_04955 PE=4 SV=1 Length = 367
Score = 39.7 bits (91), Expect = 0.14 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Frame = -1
Query: 601 HDGTIYVYGVLSGWNISLST-LDLMRGVRIRWWLLSNYLRNETKVDDTAV--QVMTLLTN 431 + GTI YG+LSG SL+T + + + +R R + L + + D A +++ L+ Sbjct: 269 YSGTIVAYGMLSGKPASLNTGMTIFKDIRNRGFWLQKWYETASMEDKQAAFGKIIPLIAT 328
Query: 430 KILTPLPGKSFPLENFGEALRESKKEARGGKIMLV 326 +L F + + A+ + ++ R GK+++V Sbjct: 329 GVLKADVDSRFAVSDIKAAVTRAAQDGRNGKVLIV 363
>tr|A3HTE6|A3HTE6_9SPHI NADPH quinone reductase or Zn-dependent oxidoreductase OS=Algoriphagus sp. PR1 GN=ALPR1_12875 PE=4 SV=1 Length = 320
Score = 38.9 bits (89), Expect = 0.23 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Frame = -1
Query: 598 DGTIYVYGVLSGWNISLST-LDLMRGVRIR-WWLLSNYLRNETKVDDTAVQ-VMTLLTNK 428 +G + V+G LS NI L++ L + +R+ +WL + K A Q V L +K Sbjct: 226 NGLMMVFGSLSLENIPLNSGLMIFNSLRVEGFWLTKLMTEIDPKDRFQAFQTVFKFLMDK 285
Query: 427 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLV 326 + FPLE F EA++ +K R GKI+L+ Sbjct: 286 RSQVDVAEKFPLEKFQEAIKAYEKGGRNGKILLI 319
>tr|A8J6Y3|A8J6Y3_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_185022 PE=4 SV=1 Length = 347
Score = 38.9 bits (89), Expect = 0.23 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Frame = -1
Query: 598 DGTIYVYGVLSGWNISLSTLD-LMRGVRIRWWLLSNYLRNETKVDDTAV--QVMTLLTNK 428 +G I +YG ++G ++ + L+ L RGV ++ + + ++ T + AV +V+ L+ + Sbjct: 253 NGVIIMYGAMNGIDLKWNVLEPLFRGVSMKGFWVWPWMNARTAEERRAVMERVVRLMVSG 312
Query: 427 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 323 +L P + PLE EAL+ R K++L G Sbjct: 313 VLPPHKVDARPLEGAVEALQYQATVGRDAKLVLRG 347
>tr|Q2JZT1|Q2JZT1_RHIEC Probable zinc-dependent oxidoreductase protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=RHE_PF00011 PE=4 SV=1 Length = 322
Score = 38.1 bits (87), Expect = 0.40 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -1
Query: 580 YGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETK--VDDTAVQVMTLLTNKILTPLPG 407 YG+LSG +I S + + L ++ +ET V +V ++ +K++ Sbjct: 236 YGLLSGESIPPSFWASHPDIAFSFCHLREWVHSETMGDVQRAYAEVAAMIASKVIATEVR 295
Query: 406 KSFPLENFGEALRESKKEARGGKIML 329 + FPLE GEAL + GGK++L Sbjct: 296 EVFPLEKIGEALHAALPFRTGGKVLL 321
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