BP915674 |
Clone id |
YMU001_000074_D10 |
Library |
YMU01 |
Length |
449 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000074_D10. |
Accession |
BP915674 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2057Contig1 |
Sequence |
GGTTGCAAGTGCGTCCTCTCAAGTAAAACAGGTTGATCCAGTCTTGGAGACATTGTGGGG ATCTACCAAATCACAGCCTGGCCTTGCAACACAAAGTGTGTCCGACGATTGGGGTGTGGA AACCAACTTTGGTGCAAGTGATCACACAGAAACGACGACTGAACTTGATGGCCTACCGCC AACACCTCCCGGTGTTAGTGGTGGACTTTCAAAAGAAAAAGGATTGAGTATTATAAACAG GCCAATTTGCTGATGCCATTAAATGGCTCTCTNTGGGCAGAAATCCTCCTACATCAAAAT GGTGAACTTCTCAGATTATAGAGGTCCTCATTGCCGATCATCGTGCCTTAAAGAACTGGA GAGTATAAAAAGCAGTTGCAGACTGTCACAAGGTATTGAGCTGGACAATGGCAACACAGC AATTTTGCTTCAACGAGCTTACTGTATGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q24120 |
Definition |
sp|Q24120|CAPU_DROME Protein cappuccino OS=Drosophila melanogaster |
Align length |
53 |
Score (bit) |
31.6 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q8G7 |
Definition |
tr|A7Q8G7|A7Q8G7_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
163 |
Score (bit) |
65.9 |
E-value |
1.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915674|Adiantum capillus-veneris mRNA, clone: YMU001_000074_D10. (449 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q8G7|A7Q8G7_VITVI Chromosome chr5 scaffold_64, whole genome... 66 1e-09 tr|A5AMS1|A5AMS1_VITVI Putative uncharacterized protein OS=Vitis... 66 1e-09 tr|Q6NMH5|Q6NMH5_ARATH At3g16760 (Putative uncharacterized prote... 54 4e-06 tr|B4G0D8|B4G0D8_MAIZE Putative uncharacterized protein OS=Zea m... 52 1e-05 tr|Q10LP1|Q10LP1_ORYSJ Os03g0340700 protein OS=Oryza sativa subs... 51 3e-05 tr|A2XGI7|A2XGI7_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|A3AHS6|A3AHS6_ORYSJ Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|Q9LUQ7|Q9LUQ7_ARATH Genomic DNA, chromosome 3, P1 clone: MGL6... 47 5e-04 tr|A9TQ10|A9TQ10_PHYPA Predicted protein OS=Physcomitrella paten... 34 0.010 tr|A9TX23|A9TX23_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.077 tr|B6FAE0|B6FAE0_9ENTR Putative uncharacterized protein OS=Enter... 34 3.2 tr|B4FBY4|B4FBY4_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.2 tr|A7EW58|A7EW58_SCLS1 Putative uncharacterized protein OS=Scler... 34 4.2 tr|A5B0G0|A5B0G0_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5 tr|A5C4R6|A5C4R6_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2 tr|A5AHJ4|A5AHJ4_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2 tr|Q7PVB4|Q7PVB4_ANOGA AGAP012219-PA OS=Anopheles gambiae GN=AGA... 33 7.2 tr|A5B778|A5B778_VITVI Putative uncharacterized protein OS=Vitis... 33 9.4 tr|A5AXF4|A5AXF4_VITVI Putative uncharacterized protein OS=Vitis... 33 9.4
>tr|A7Q8G7|A7Q8G7_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033047001 PE=4 SV=1 Length = 452
Score = 65.9 bits (159), Expect = 1e-09 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 23/163 (14%) Frame = +2
Query: 20 QVKQVDPVLETLWGSTKS---------QPGLATQSVSDDWGVETNFGAS-DHTETTTELD 169 Q VDP L+ L+ S+ S + G S DDWG++++FG D+ TTTEL+ Sbjct: 261 QTSNVDP-LDMLFASSASAGTGPTGSERVGEQQFSEGDDWGLDSDFGGGHDNGGTTTELE 319
Query: 170 GLPPTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS--------DYRG 325 GLPP P GV+ +K KGL + GQ + IK ++++ D G Sbjct: 320 GLPPPPAGVTAASAKSKGLDNHKQ-----------GQYADAIKWLSWAVVLLEKAGDDAG 368
Query: 326 P----HCRSSCLKEL-ESIKSSCRLSQGIELDNGNTAILLQRA 439 CR+SC KE+ E K+ S+ +E D N ++L+QRA Sbjct: 369 TMEVLTCRASCYKEVGEYKKAVADCSKVLEHDEKNVSVLVQRA 411
>tr|A5AMS1|A5AMS1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012016 PE=4 SV=1 Length = 532
Score = 65.9 bits (159), Expect = 1e-09 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 23/163 (14%) Frame = +2
Query: 20 QVKQVDPVLETLWGSTKS---------QPGLATQSVSDDWGVETNFGAS-DHTETTTELD 169 Q VDP L+ L+ S+ S + G S DDWG++++FG D+ TTTEL+ Sbjct: 341 QTSNVDP-LDMLFASSASAGTGPTGSERVGEQQFSEGDDWGLDSDFGGGHDNGGTTTELE 399
Query: 170 GLPPTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS--------DYRG 325 GLPP P GV+ +K KGL + GQ + IK ++++ D G Sbjct: 400 GLPPPPAGVTAASAKSKGLDNHKQ-----------GQYADAIKWLSWAVVLLEKAGDDAG 448
Query: 326 P----HCRSSCLKEL-ESIKSSCRLSQGIELDNGNTAILLQRA 439 CR+SC KE+ E K+ S+ +E D N ++L+QRA Sbjct: 449 TMEVLTCRASCYKEVGEYKKAVADCSKVLEHDEKNVSVLVQRA 491
>tr|Q6NMH5|Q6NMH5_ARATH At3g16760 (Putative uncharacterized protein At3g16760) OS=Arabidopsis thaliana GN=At3g16760 PE=2 SV=1 Length = 475
Score = 53.9 bits (128), Expect = 4e-06 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 14/139 (10%) Frame = +2
Query: 65 TKSQPGLATQSV-SDDWGVETNFGASDHTETTTELDGLPPTPPGVSGGLSKEKGLSIINR 241 + S+P A + ++DWG E+ G + +TTELDGLPP PPGVS +K KG+ + Sbjct: 310 SNSKPSAAPPTPQTEDWGFESFDGGAG---STTELDGLPPPPPGVSATSAKNKGIDNQRQ 366
Query: 242 PIC*CH*MALXGQKSSYIKMVNFS----DYRGPHC--------RSSCLKEL-ESIKSSCR 382 GQ + IK ++++ D G R+SC KE+ E K+ Sbjct: 367 -----------GQYADAIKWLSWAVILMDRAGDEAGSAEVLSTRASCYKEVGEYKKAVAD 415
Query: 383 LSQGIELDNGNTAILLQRA 439 ++ ++ D N IL+QRA Sbjct: 416 CTKVLDHDKKNVTILVQRA 434
>tr|B4G0D8|B4G0D8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 495
Score = 52.4 bits (124), Expect = 1e-05 Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 24/160 (15%) Frame = +2
Query: 32 VDPVLETLWGSTKSQPGLATQSVSDDWG-----------VETNFGASDHTETTTELDGLP 178 +DP L+ L+ ST S P A S D G VE F D TTTELDGLP Sbjct: 307 MDP-LDNLFASTTSAPTAAAASNGDSGGDMFGEMDGWVDVEAEFAGGDSGGTTTELDGLP 365
Query: 179 PTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS----DYRGPHC---- 334 P P G++ +K KG+ GQ + IK ++++ + G Sbjct: 366 PPPSGLTISAAKAKGMDSYK-----------GGQYADAIKWLSWAVVLIEKSGKDADIVE 414
Query: 335 ----RSSCLKEL-ESIKSSCRLSQGIELDNGNTAILLQRA 439 R+S KE+ E K+ S+ ++ D N ++L+QRA Sbjct: 415 VLSSRASSYKEVGEYKKAITDCSKVLDQDKDNVSVLVQRA 454
>tr|Q10LP1|Q10LP1_ORYSJ Os03g0340700 protein OS=Oryza sativa subsp. japonica GN=Os03g0340700 PE=2 SV=1 Length = 492
Score = 51.2 bits (121), Expect = 3e-05 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 22/167 (13%) Frame = +2
Query: 5 ASASSQVKQVDPVLETLWGSTKSQPGLATQSVS--------DDW-GVETNFGASDHTETT 157 A+A+S V +D +L+ ST + P + D W VE +FG+ D T Sbjct: 300 AAANSGVDHLD----SLFASTTAAPTAVSNGGGGGDMFGEMDGWVDVEADFGSGDSGGAT 355
Query: 158 TELDGLPPTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS----DYRG 325 TEL+GLPP P G++ +K KG+ GQ + IK ++++ + G Sbjct: 356 TELEGLPPPPSGLTASAAKSKGMDNYK-----------GGQYADAIKWLSWAVVLIEKSG 404
Query: 326 PHC--------RSSCLKEL-ESIKSSCRLSQGIELDNGNTAILLQRA 439 + R+S KE+ E K+ S+ +E D N ++L+QRA Sbjct: 405 KYADIVEVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNVSVLVQRA 451
>tr|A2XGI7|A2XGI7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11499 PE=4 SV=1 Length = 492
Score = 50.1 bits (118), Expect = 6e-05 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%) Frame = +2
Query: 5 ASASSQVKQVDPVLETLWGSTKSQPGLATQSVS--------DDW-GVETNFGASDHTETT 157 A+A+S V +D +L+ ST + P + D W VE +FG+ D T Sbjct: 300 AAANSGVDHLD----SLFASTTAAPTAVSNGGGGGDMFGEMDGWVDVEADFGSGDSGGAT 355
Query: 158 TELDGLPPTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS----DYRG 325 TEL+GLPP P G++ +K KG+ GQ + IK ++++ + G Sbjct: 356 TELEGLPPPPSGLTASAAKSKGMDNYK-----------GGQYADAIKWLSWAVVLIEKSG 404
Query: 326 PHC--------RSSCLKEL-ESIKSSCRLSQGIELDNGNTAILLQRA 439 R+S KE+ E K+ S+ +E D N ++L+QRA Sbjct: 405 KDADIVEVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNVSVLVQRA 451
>tr|A3AHS6|A3AHS6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010348 PE=4 SV=1 Length = 339
Score = 47.4 bits (111), Expect = 4e-04 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%) Frame = +2
Query: 5 ASASSQVKQVDPVLETLWGSTKSQPGLATQSVS--------DDW-GVETNFGASDHTETT 157 A+A+S V +D +L+ ST + P + D W VE +FG+ D T Sbjct: 171 AAANSGVDHLD----SLFASTTAAPTAVSNGGGGGDMFGEMDGWVDVEADFGSGDSGGAT 226
Query: 158 TELDGLPPTPPGVSGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFSDYRGPHCR 337 TEL+GLPP P G++ +K KG+ GQ + IK ++++ Sbjct: 227 TELEGLPPPPSGLTASAAKSKGMDNYK-----------GGQYADAIKWLSWA-------- 267
Query: 338 SSCLKELESIKSSCRLSQGIELDNGNTAILLQRA 439 + +E + + +E D N ++L+QRA Sbjct: 268 ---VVLIEKSGKYADIVEVLEKDKDNVSVLVQRA 298
>tr|Q9LUQ7|Q9LUQ7_ARATH Genomic DNA, chromosome 3, P1 clone: MGL6 OS=Arabidopsis thaliana PE=4 SV=1 Length = 400
Score = 47.0 bits (110), Expect = 5e-04 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +2
Query: 65 TKSQPGLATQSV-SDDWGVETNFGASDHTETTTELDGLPPTPPGVSGGLSKEKGL 226 + S+P A + ++DWG E+ G + +TTELDGLPP PPGVS +K KG+ Sbjct: 310 SNSKPSAAPPTPQTEDWGFESFDGGAG---STTELDGLPPPPPGVSATSAKNKGI 361
>tr|A9TQ10|A9TQ10_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_95640 PE=4 SV=1 Length = 702
Score = 34.3 bits (77), Expect(2) = 0.010 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Frame = +2
Query: 44 LETLWGSTKSQPGLATQSVSDDWGVETNFGASDHTET------TTELDGLPPTPPGVSGG 205 L++L+G S D WG FGA+ ++ TTEL+G+ P GV+G Sbjct: 476 LDSLFGIGSSSSASKAAQAHDGWG--DVFGAAAEVQSFENEAATTELEGVGGAPVGVTGN 533
Query: 206 LSKEKG 223 + EKG Sbjct: 534 SALEKG 539
Score = 28.1 bits (61), Expect(2) = 0.010 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +3
Query: 240 GQFADAIKWLSXGRNP-PTSKW*TSQIIEVLIADHRALKN-WRV*KAVADCHKV 395 GQF +AIKW S K I+EVL K + KA+ADC KV Sbjct: 546 GQFPNAIKWFSWAVEVLEKEKGSKGAIVEVLTKRMSCFKEIGEMKKAIADCTKV 599
>tr|A9TX23|A9TX23_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172465 PE=4 SV=1 Length = 506
Score = 39.7 bits (91), Expect = 0.077 Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 20/158 (12%) Frame = +2
Query: 29 QVDPVLETLWGSTKSQPGLATQSVSDDWGVETNFGASDHT----ETTTELDGLPPTPPGV 196 Q D + + S++S G D WG A H+ TTEL+G+ PPG+ Sbjct: 322 QFDSIFGSGMSSSRSA-GAKPAQAHDGWGEAFGAAAESHSFENEAATTELEGVGAAPPGL 380
Query: 197 SGGLSKEKGLSIINRPIC*CH*MALXGQKSSYIKMVNFS-----DYRGPH--------CR 337 +G + EKG + GQ IK +++ +G R Sbjct: 381 AGNSAFEKGSTFYKE-----------GQFPDAIKWFSWAVELLEKEKGKKDTIIHVLTKR 429
Query: 338 SSCLKELESIKSSCRLSQGI---ELDNGNTAILLQRAY 442 SC KE+ +K + + +++ GN +L+QRA+ Sbjct: 430 MSCFKEIGEMKKAIADGTKVWACDMEPGNVELLMQRAH 467
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