BP915675
Clone id YMU001_000074_D11
Library
Length 193
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCTAGCCGGAGGTGGGCACCTTTGAAATGGAAAGAAAGCGAGGGCACTGTGCGATGGCA
GAGATGAGTAGCAGAGAGAGAGATTTCGCGGGCCTGCTACCGCGCCGCCTTGCCAAGGTG
TGAGCGGGATGAGCGCTTTAAAAGCACGAGGAGACAGCGCGGAAAGCTGCCATGGGCAGC
TGTGGTGAAGGTG
■■Homology search results ■■ -
sp_hit_id O14148
Definition sp|O14148|INO80_SCHPO Putative DNA helicase ino80 OS=Schizosaccharomyces pombe
Align length 44
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915675|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_D11.
(193 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O14148|INO80_SCHPO Putative DNA helicase ino80 OS=Schizosacch... 29 6.5
sp|Q6BRR2|SEC31_DEBHA Protein transport protein SEC31 OS=Debaryo... 29 8.5

>sp|O14148|INO80_SCHPO Putative DNA helicase ino80
OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4
Length = 1604

Score = 29.3 bits (64), Expect = 6.5
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2

Query: 41 EGTVRWQR*V-AEREISRACYRAALPRCERDERFKSTRRQRGKL 169
E V W+R ER++ + R AL R +++E + +RRQ KL
Sbjct: 688 ETMVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQARKL 731


>sp|Q6BRR2|SEC31_DEBHA Protein transport protein SEC31 OS=Debaryomyces
hansenii GN=SEC31 PE=3 SV=2
Length = 1265

Score = 28.9 bits (63), Expect = 8.5
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -1

Query: 163 SALSPRAFKALIPLTPWQGGAVAGPRNLSLCYSSLPSHSALAFFPFQRCPPP 8
SA+SP+ A IP P GG VA P ++ SSLP ++ P PP
Sbjct: 1090 SAVSPKPHAAGIP-APRMGGVVAPPPPVASSTSSLPPPPGISQQPPAANAPP 1140


tr_hit_id B6KF56
Definition tr|B6KF56|B6KF56_TOXGO Mitochondrial carrier domain-containing protein OS=Toxoplasma gondii ME49
Align length 64
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915675|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_D11.
(193 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KF56|B6KF56_TOXGO Mitochondrial carrier domain-containing p... 35 1.9
tr|A7RZ40|A7RZ40_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 1.9
tr|A9V168|A9V168_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.3

>tr|B6KF56|B6KF56_TOXGO Mitochondrial carrier domain-containing
protein OS=Toxoplasma gondii ME49 GN=TGME49_028670 PE=4
SV=1
Length = 2497

Score = 35.0 bits (79), Expect = 1.9
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1

Query: 190 LHHSCPWQLSALSPRAFKALIPLTPWQGGAVAGPRNLSLCYSSLPSHSALAFFP-FQRCP 14
LH + W +A PR A + + G+ AGP + S C SSLPS S + P Q
Sbjct: 272 LHGNAAWGGTACGPRGLPAAVTSSSRPPGSPAGPLDAS-CASSLPSPSPVTSAPSAQPAS 330

Query: 13 PPAS 2
PP S
Sbjct: 331 PPIS 334


>tr|A7RZ40|A7RZ40_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g54924 PE=4 SV=1
Length = 136

Score = 35.0 bits (79), Expect = 1.9
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = -1

Query: 184 HSCPWQLSALSPRAFKALIPLTPWQGGAVAGPRNLSLCYSSLPSHSALAFFPFQRCPPP 8
H PW+ + SP A PLTP GG + P LSL + P H FP++ PPP
Sbjct: 78 HPFPWRPNTPSPLPVAAKYPLTPSLGGQIP-PSPLSLA-AKYPPHP----FPWRTNPPP 130


>tr|A9V168|A9V168_MONBE Predicted protein OS=Monosiga brevicollis
GN=37356 PE=4 SV=1
Length = 282

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3

Query: 3 LAGGGHL*NGKKARALCDGRDE*QRERFRGPATAPPCQGVSGMSALK 143
LA GG L G A CDGR +R +F G T QG+ AL+
Sbjct: 50 LASGGSLSYGAPASPSCDGRPTRKRSKFFGDVTIDSFQGLERHRALE 96