BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915695|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_F12.
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7Z3S9|NT2NL_HUMAN Notch homolog 2 N-terminal-like protein OS...    30   3.8  
sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 O...    30   3.8  
sp|A1SBV1|MNMG_SHEAM tRNA uridine 5-carboxymethylaminomethyl mod...    30   3.8  
sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a ...    30   4.9  
sp|P38008|PMPF_CHLTR Probable outer membrane protein pmpF OS=Chl...    29   6.4  

>sp|Q7Z3S9|NT2NL_HUMAN Notch homolog 2 N-terminal-like protein
           OS=Homo sapiens GN=NOTCH2NL PE=1 SV=1
          Length = 236

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +3

Query: 132 GWWECLSWVLWRWHYCDSALVHCGPIPCVTNLCNNATSGRIHGFHSIRNCM 284
           G ++C     +   YCDS  V C P PCV    N  T  +   F    NC+
Sbjct: 164 GSYQCQCLQGFTGQYCDSLYVPCAPSPCV----NGGTCRQTGDFTFECNCL 210


>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2
           OS=Homo sapiens GN=NOTCH2 PE=1 SV=3
          Length = 2471

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 132 GWWECLSWVLWRWHYCDSALVHCGPIPCVTNLCNNATSGRIHGFHSIRNCMQSY 293
           G ++C     +   YCDS  V C P PCV    N  T  +   F    NC+  +
Sbjct: 203 GSYQCQCPQGFTGQYCDSLYVPCAPSPCV----NGGTCRQTGDFTFECNCLPGF 252


>sp|A1SBV1|MNMG_SHEAM tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Shewanella amazonensis
           (strain ATCC BAA-1098 / SB2B) GN=mnmG PE=3 SV=1
          Length = 629

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 220 VTQGMGPQ-CTSAESQ*CHLHNTQLKHSHQPYL*PQFVTTTMLLYNNNCNESV 65
           V +G+GP+ C S E +   +H    K+SHQ ++ P+ +TTT  +Y N  + S+
Sbjct: 268 VIEGIGPRYCPSIEDK---IHRFADKNSHQIFIEPEGLTTTE-IYPNGISTSL 316


>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a
           PE=2 SV=1
          Length = 1242

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +3

Query: 138 WECLSWVLWRWHYCDSALVHCGPI-PCVT-NLCNNATSGRIH 257
           W+CL    W    CD  L  CG + PC+    C+N    + H
Sbjct: 281 WQCLCDTNWGGQLCDKDLNTCGTLQPCLNGGTCSNTGPDKYH 322


>sp|P38008|PMPF_CHLTR Probable outer membrane protein pmpF
           OS=Chlamydia trachomatis GN=pmpF PE=1 SV=2
          Length = 1034

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 121 PQFVTTTMLLYNNNCNESV*TTPTSCLSHQPLNKTFPPAN 2
           P ++TTT  +  NN N S  T+ TS    +  ++TF P+N
Sbjct: 648 PNWITTTYTITLNN-NSSAPTSATSIAEQKKTSETFTPSN 686

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915695|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_F12.
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5VZD8|B5VZD8_SPIMA Mg chelatase, subunit ChlI OS=Arthrospira...    33   7.2  
tr|B6P6W8|B6P6W8_BRAFL Putative uncharacterized protein OS=Branc...    33   9.4  

>tr|B5VZD8|B5VZD8_SPIMA Mg chelatase, subunit ChlI OS=Arthrospira
           maxima CS-328 GN=AmaxDRAFT_1940 PE=4 SV=1
          Length = 509

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 172 TIVTRRLCIVDPSLVSLIYATMPLPAGYMGFTAYVIACS 288
           T+   RL +V PS  +LI +T P P GY G       CS
Sbjct: 329 TVTRTRLSVVFPSQFTLIASTNPCPCGYYGDPIQACTCS 367


>tr|B6P6W8|B6P6W8_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_103454 PE=4 SV=1
          Length = 1952

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
 Frame = +3

Query: 138  WECLSWVLWRWHYCDSALVHCGPIPCVTNLCNNATSGRI----HGF------HSIRNCMQ 287
            + C   + W  + CD  +  C P PC    C++A +G      HG+      ++I NC+ 
Sbjct: 1372 YTCSCEIGWEGYNCDQDIDDCSPEPCTHGTCHDAVAGYTCTCEHGWGGVNCSNNIDNCVG 1431

Query: 288  S 290
            S
Sbjct: 1432 S 1432