BP915700
Clone id YMU001_000074_G05
Library
Length 429
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGTCATGACTTTGTGATTGCTTGAAGCCGCAGTACCTTATTCTAGAAACATCTTTGTTT
GTGACCTGTAACTTTGCAAGATATACAAGCTCTTGAACCCTTGTGAGCAGTACCTTATTC
TAGAAACATCTTTGTTTGTGACCTGTAACTTTGCAAGATATACAAGCTCTTGAACCCTTG
TGAGCATACTCTTTTATATGTACACCAAGCCTATATTCCCACGCCTCATTTGTCTGGCTG
TACACTGCATGAGGTGTGGGATGGCAAAACACATTTATAGTCGATACTGATGTCGGTGGG
CATGTCTCAACTTCTTCTGCATCTTTTGAAAGATTTTATCACCCAGACTTCTAAACCCTC
CGTTGGACTTCCAATCATAAACAACCATTATGAATATTGCATAGACCAACCACAACAACA
TCACAATCA
■■Homology search results ■■ -
sp_hit_id P76150
Definition sp|P76150|YNEK_ECOLI Uncharacterized protein yneK OS=Escherichia coli (strain K12)
Align length 46
Score (bit) 28.9
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915700|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_G05.
(429 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P76150|YNEK_ECOLI Uncharacterized protein yneK OS=Escherichia... 29 9.1
sp|Q80YG3|KLDC1_MOUSE Kelch domain-containing protein 1 OS=Mus m... 29 9.1

>sp|P76150|YNEK_ECOLI Uncharacterized protein yneK OS=Escherichia
coli (strain K12) GN=yneK PE=1 SV=1
Length = 371

Score = 28.9 bits (63), Expect = 9.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2

Query: 287 LMSVGMSQLLLHLLKDFITQTSKPSVGLPIINNHYEYCIDQPQQHH 424
+ G+ ++L L DFI Q + G+PI H + P HH
Sbjct: 140 VFQTGVERVLFLFLNDFIEQFPMINPGVPIKRAHTPHIEPLPSDHH 185


>sp|Q80YG3|KLDC1_MOUSE Kelch domain-containing protein 1 OS=Mus
musculus GN=Klhdc1 PE=2 SV=1
Length = 406

Score = 28.9 bits (63), Expect = 9.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2

Query: 170 RACISCKVTGHKQRCF*NKVLLTRVQELVYL 78
RA SC V G+K F +VL TR+ +L YL
Sbjct: 197 RAAHSCAVLGNKGYVFGGRVLQTRMNDLHYL 227


tr_hit_id A2E263
Definition tr|A2E263|A2E263_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3
Align length 56
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915700|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_G05.
(429 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2E263|A2E263_TRIVA Putative uncharacterized protein OS=Trich... 35 2.5
tr|B5V856|B5V856_BACCE Putative transcriptional regulator, TetR ... 33 9.4

>tr|A2E263|A2E263_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_464110 PE=4 SV=1
Length = 133

Score = 34.7 bits (78), Expect = 2.5
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2

Query: 119 SRNIFVCDL*LCKIYKLLNPCEHTLLYVHQAYIPTPHLSGCTLHEVWDGKTHL*SI 286
SR++ +C CK+ + NP + L ++ YIP GCTL+++ + KTHL SI
Sbjct: 74 SRSLNICST--CKVIRSFNPQSNGLAWILYEYIP-----GCTLYDLIN-KTHLHSI 121


>tr|B5V856|B5V856_BACCE Putative transcriptional regulator, TetR
family OS=Bacillus cereus H3081.97 GN=BCH308197_5154
PE=4 SV=1
Length = 503

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2

Query: 53 LCL*PVTLQDIQALEPL*AVPYSRNIFVCDL*LCKIYKLLNPCEHTLLYVHQAYI 217
+CL + L D EPL + Y ++I CD+ + N C LLY+H YI
Sbjct: 138 VCLNEMKLNDKPVYEPL--IWYLKDIQKCDVHSILLQDKCNNCNRRLLYLHSRYI 190