BP915706 |
Clone id |
YMU001_000074_H01 |
Library |
YMU01 |
Length |
488 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000074_H01. |
Accession |
BP915706 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1241Contig1 |
Sequence |
CCATGATTCTTCGGAACGGAGGGCTTGATGCCATACCAATTAATGGTCAAATGAGCCAGC CAAAGAGGTTGGGTGCATTGAATAAGTTTAAAGCTGGAGAAAGGAGTATACTGATCTGCA CAGATGTTGCGAGTAGGGGGCTAGACATTCCATCAGTGGATGTTGTAATCAACTACGACA TTCCGATGAATTCCAAAGACTATATTCATAGGGTAGGGCGTACTGCACGTGCGGGTAGGT CTGGGCGGGCTATCTCGATTGTCACCCAATACGATATCGAACTTTATCAAAGAATTGAGA AGCTTATTGAGAAAAAGCTGCCATCTTTTCCAGCACTTGAAGATGGAATGATGTTGCTTG CCGAACGTGTTGCTGAGGCTCAGCGATTGGCAACAATGAAAATTAGAGAGAGGGATGCTA AAGGAAAGAAGAGGAGAGCCACAGATCCTGATGAGGATGATCATGGTGATGCAAAGAGGA GCTTAAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9H0S4 |
Definition |
sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens |
Align length |
153 |
Score (bit) |
179.0 |
E-value |
8.0e-45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RTN8 |
Definition |
tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
186.0 |
E-value |
5.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915706|Adiantum capillus-veneris mRNA, clone: YMU001_000074_H01. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella paten... 186 5e-46 tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifol... 182 6e-45 tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome... 182 6e-45 tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, who... 182 1e-44 tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectens... 180 3e-44 tr|Q5ZLB0|Q5ZLB0_CHICK Putative uncharacterized protein OS=Gallu... 180 4e-44 tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinha... 179 6e-44 tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DB... 179 8e-44 tr|Q7Z4B1|Q7Z4B1_HUMAN MSTP162 OS=Homo sapiens GN=MST162 PE=2 SV=1 179 8e-44 tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 179 8e-44 tr|B3KXP4|B3KXP4_HUMAN cDNA FLJ45812 fis, clone NT2RP7016508, hi... 179 8e-44 tr|Q5BIZ6|Q5BIZ6_RAT DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 O... 178 1e-43 tr|A4S5D5|A4S5D5_OSTLU Predicted protein OS=Ostreococcus lucimar... 178 1e-43 tr|A8PGU8|A8PGU8_BRUMA ATP-dependent RNA helicase T26G10.1 in ch... 176 4e-43 tr|Q922S6|Q922S6_MOUSE Ddx47 protein OS=Mus musculus GN=Ddx47 PE... 176 5e-43 tr|Q4VBG1|Q4VBG1_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 176 5e-43 tr|Q3TEK1|Q3TEK1_MOUSE Putative uncharacterized protein OS=Mus m... 176 5e-43 tr|Q6INR0|Q6INR0_XENLA MGC81303 protein OS=Xenopus laevis GN=ddx... 175 1e-42 tr|B3RQA4|B3RQA4_TRIAD Putative uncharacterized protein (Fragmen... 171 1e-41 tr|Q502B4|Q502B4_DANRE Zgc:112350 OS=Danio rerio GN=zgc:112350 P... 170 4e-41 tr|B6LBZ1|B6LBZ1_BRAFL Putative uncharacterized protein OS=Branc... 169 6e-41 tr|B6KZV0|B6KZV0_BRAFL Putative uncharacterized protein OS=Branc... 167 2e-40 tr|A8NHA3|A8NHA3_COPC7 Putative uncharacterized protein OS=Copri... 166 4e-40 tr|Q16HQ7|Q16HQ7_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 166 7e-40 tr|B4MDP0|B4MDP0_DROVI GJ16136 OS=Drosophila virilis GN=GJ16136 ... 164 2e-39 tr|B4JQB9|B4JQB9_DROGR GH13670 OS=Drosophila grimshawi GN=GH1367... 163 4e-39 tr|Q29NS3|Q29NS3_DROPS GA21647 OS=Drosophila pseudoobscura pseud... 163 5e-39 tr|B4GJI5|B4GJI5_DROPE GL25891 OS=Drosophila persimilis GN=GL258... 163 5e-39 tr|B3MN83|B3MN83_DROAN GF14739 OS=Drosophila ananassae GN=GF1473... 162 6e-39 tr|Q7Q1G0|Q7Q1G0_ANOGA AGAP009808-PA (Fragment) OS=Anopheles gam... 162 8e-39
>tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_178010 PE=3 SV=1 Length = 452
Score = 186 bits (472), Expect = 5e-46 Identities = 98/156 (62%), Positives = 119/156 (76%), Gaps = 2/156 (1%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G AIPI+GQMSQPKRLGAL KFKAG+ +ILICTDVASRGLDIPSV++VINYDI Sbjct: 276 LVLRNLGFVAIPISGQMSQPKRLGALAKFKAGDCNILICTDVASRGLDIPSVNLVINYDI 335
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P NSKDYIH IS+V QYD+ELYQ+IE+LI KKLP F ++ ++L+ Sbjct: 336 PTNSKDYIHRVGRTARAGRSGRAISMVCQYDVELYQKIEELIGKKLPEFSHQQEEVLLML 395
Query: 363 ERVAEAQRLATMKIRERDA--KGKKRRATDPDEDDH 464 ERV+EAQRLATM +RE+D KGK+R D D DD+ Sbjct: 396 ERVSEAQRLATMHMREKDGAKKGKRRGHGDDDGDDN 431
>tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifolium pratense PE=2 SV=1 Length = 440
Score = 182 bits (463), Expect = 6e-45 Identities = 94/156 (60%), Positives = 116/156 (74%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 +ILRN GL AIPING MSQPKRLGALNKFK+G+ +IL+CTDVASRGLDIP+VD+VINYDI Sbjct: 268 LILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDI 327
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P NSKDYIH IS+V QY++E Y +IEKLI KKLP +PA E+ ++LL Sbjct: 328 PTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLE 387
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGD 470 ERV+EA+RLA K++E K K+R D +D+ D Sbjct: 388 ERVSEAKRLAATKMKESGGKKKRRGEGDSGDDEDID 423
>tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035163001 PE=3 SV=1 Length = 298
Score = 182 bits (463), Expect = 6e-45 Identities = 97/153 (63%), Positives = 115/153 (75%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN GL AIPI+G MSQ KRLGALNKFKAGE +ILICTDVASRGLDIPSVD+VINYDI Sbjct: 128 LLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 187
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P NSKDYIH IS+V QY++E Y +IEKLI KKLP FPA E+ ++LL Sbjct: 188 PSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLLLL 247
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERV EA+R++ MKI+E K KKRR D E++ Sbjct: 248 ERVTEAKRISQMKIKETGGK-KKRRGGDEGEEE 279
>tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013119001 PE=3 SV=1 Length = 436
Score = 182 bits (461), Expect = 1e-44 Identities = 96/153 (62%), Positives = 115/153 (75%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN GL AIPI+G MSQ KRLGALNKFKAGE +ILICTDVASRGLDIPSVD+VINYDI Sbjct: 266 LLLRNLGLRAIPISGHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 325
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P NSKDYIH IS+V QY++E Y +IEKLI KKLP FPA E+ ++LL Sbjct: 326 PSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLLLL 385
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERV EA+R++ MK++E K KKRR D E++ Sbjct: 386 ERVTEAKRISQMKVKETGGK-KKRRGGDEGEEE 417
>tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g192845 PE=3 SV=1 Length = 446
Score = 180 bits (457), Expect = 3e-44 Identities = 93/153 (60%), Positives = 114/153 (74%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN GLDA+P++GQMSQ KRLGALNKFK+ RSIL+ TDVASRGLDIP VDVVIN+DI Sbjct: 271 LMLRNLGLDAVPLHGQMSQSKRLGALNKFKSKSRSILVATDVASRGLDIPHVDVVINFDI 330
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P +SKDYIH ++ VTQYD+ELYQRIE LI KKLP +P +E+ +MLL Sbjct: 331 PTHSKDYIHRVGRTARAGRSGRSVTFVTQYDVELYQRIEHLIAKKLPQYPTVEEEVMLLM 390
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERV EAQR A M++RE KK+RA + D D+ Sbjct: 391 ERVTEAQRYARMELRE--INDKKKRAPEDDLDE 421
>tr|Q5ZLB0|Q5ZLB0_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_6o10 PE=2 SV=1 Length = 453
Score = 180 bits (456), Expect = 4e-44 Identities = 94/157 (59%), Positives = 118/157 (75%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRGLDIP VDVVIN+DI Sbjct: 282 LLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDI 341
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P +SKDYIH I+ VTQYD+EL+QRIE LI KKLP+FP E+ +M+L Sbjct: 342 PTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLT 401
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGDA 473 ERVAEAQR A M++RE +G+K+R+ + D+DD +A Sbjct: 402 ERVAEAQRFARMELRE---QGEKKRSRNADDDDTEEA 435
>tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_223 PE=3 SV=1 Length = 446
Score = 179 bits (454), Expect = 6e-44 Identities = 89/159 (55%), Positives = 116/159 (72%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G A+PI+G MSQPKRLGALNKFK+GER+IL+ TDVASRGLDIPSVDVVIN+D+ Sbjct: 274 LLLRNLGFGAVPIHGHMSQPKRLGALNKFKSGERNILVATDVASRGLDIPSVDVVINFDV 333
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P NSKDY+H ++IVTQYD+EL+Q+IE L K+ F A + ++LL Sbjct: 334 PQNSKDYVHRVGRTARAGRSGRSVTIVTQYDVELFQKIEHLTGVKMEQFQAEREEVLLLL 393
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGDAKR 479 ERV++AQRLATM+++E DA K +R D D++ G R Sbjct: 394 ERVSDAQRLATMQMKEADAGKKGKRKADDDDEGAGGGGR 432
>tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DBP PE=2 SV=1 Length = 455
Score = 179 bits (453), Expect = 8e-44 Identities = 92/153 (60%), Positives = 110/153 (71%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G AIP++GQMSQ KRLG+LNKFKA E SIL+ TDVASRGLDIP VDVV+N+DI Sbjct: 281 LLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKESSILLATDVASRGLDIPHVDVVVNFDI 340
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P +SKDYIH I+ VTQYD+EL+QRIE LI KKLP FP +D +M+L Sbjct: 341 PTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLT 400
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERVAEAQR A M++RE K K+ R D DD Sbjct: 401 ERVAEAQRFARMELREHGEKKKRSREDAGDNDD 433
>tr|Q7Z4B1|Q7Z4B1_HUMAN MSTP162 OS=Homo sapiens GN=MST162 PE=2 SV=1 Length = 189
Score = 179 bits (453), Expect = 8e-44 Identities = 92/153 (60%), Positives = 110/153 (71%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRGLDIP VDVV+N+DI Sbjct: 15 LLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDI 74
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P +SKDYIH I+ VTQYD+EL+QRIE LI KKLP FP +D +M+L Sbjct: 75 PTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLT 134
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERVAEAQR A M++RE K K+ R D DD Sbjct: 135 ERVAEAQRFARMELREHGEKKKRSREDAGDNDD 167
>tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 448
Score = 179 bits (453), Expect = 8e-44 Identities = 92/153 (60%), Positives = 110/153 (71%) Frame = +3
Query: 3 MILRNGGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRGLDIPSVDVVINYDI 182 ++LRN G AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRGLDIP VDVV+N+DI Sbjct: 274 LLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDI 333
Query: 183 PMNSKDYIHXXXXXXXXXXXXXXISIVTQYDIELYQRIEKLIEKKLPSFPALEDGMMLLA 362 P +SKDYIH I+ VTQYD+EL+QRIE LI KKLP FP +D +M+L Sbjct: 334 PTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLT 393
Query: 363 ERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 461 ERVAEAQR A M++RE K K+ R D DD Sbjct: 394 ERVAEAQRFARMELREHGEKKKRSREDAGDNDD 426
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