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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915712
Clone id YMU001_000074_H07
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000074_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATGCCTTGATTCAATAAAACAATGCAATAATATATCTGTTCAGGGATTTTCATATGTAA
CATGGCATACACTATCTAATAAGCAACTCTTTTGCTTTGCCCAATCTAAAGACAAAGCAT
AAGAATTTGCAATACATCCAACAAAAGGTACATGAGTCAATCCGTACTGAAGCCTTGACA
GTACCACAAACATCAAACTCTTACCTCATCTGTTATTCGCATCTTATTTGGAGGATTGGA
GTAGACTTTATGTACTCCATTGGTGACAGAAATAATTTCCCCAGGTTTCTCCGTAAACCA
GTGCATCTGATCTTCATTTGAGTTGCCTTCACTATGTTTTTGCACCTCACTTATGCCGTT
CGGTGTCTCGGACTGTTTAGATTTATCCTGTTGAAATGGGACCACAAACCTTTTCAACTT
CTCAAAGAAAGACCCATTTTGATTGCCTTGAGCAGCCCTTAGAGCAGCTTCACTTGGACT
AAAATACT
■■Homology search results ■■ -
sp_hit_id Q8MUF9
Definition sp|Q8MUF9|CPLA_DICDI Putative calpain-like cysteine protease A OS=Dictyostelium discoideum
Align length 73
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915712|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_H07.
         (488 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8MUF9|CPLA_DICDI Putative calpain-like cysteine protease A O...    32   2.0  
sp|Q9DF50|CLSPN_XENLA Claspin OS=Xenopus laevis GN=clspn PE=1 SV=2     32   2.0  
sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase ...    30   4.5  
sp|Q09259|YQB6_CAEEL Uncharacterized protein C30G12.6 OS=Caenorh...    30   5.8  
sp|P0C559|GYRB_MYCSM DNA gyrase subunit B OS=Mycobacterium smegm...    30   5.8  
sp|A0QNE0|GYRB_MYCS2 DNA gyrase subunit B OS=Mycobacterium smegm...    30   5.8  
sp|Q9VZW5|FMAR_DROME FMRFamide receptor OS=Drosophila melanogast...    30   7.6  
sp|Q02084|A33_PLEWA Zinc-binding protein A33 OS=Pleurodeles walt...    30   7.6  

>sp|Q8MUF9|CPLA_DICDI Putative calpain-like cysteine protease A
           OS=Dictyostelium discoideum GN=cplA PE=1 SV=1
          Length = 649

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/73 (26%), Positives = 33/73 (45%)
 Frame = -3

Query: 420 KLKRFVVPFQQDKSKQSETPNGISEVQKHSEGNSNEDQMHWFTEKPGEIISVTNGVHKVY 241
           ++K+  +    +K   + +P+   E Q+  +    EDQ H   E P E  S T G  +  
Sbjct: 134 RVKKENITNSNNKDNNTASPSSPDEAQEKGD----EDQHHSADESPAEETSPTTGRPRSV 189

Query: 240 SNPPNKMRITDEV 202
           S P  K++   E+
Sbjct: 190 SMPAKKVKAAPEI 202


>sp|Q9DF50|CLSPN_XENLA Claspin OS=Xenopus laevis GN=clspn PE=1 SV=2
          Length = 1285

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -3

Query: 423 EKLKRFVVPFQQDKSKQSETPNGISEVQKHSEGNSNEDQMHWFTEKPGEIIS 268
           +K K+  V    D  ++ E  N    V+ HS+   NE+ M  + EKP +I S
Sbjct: 58  KKSKKKEVLVDSDSDEELEMRNFADNVKGHSDNEENEETMSAYREKPRKIRS 109


>sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA
           OS=Homo sapiens GN=ATP8A1 PE=1 SV=1
          Length = 1164

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 378 KQSETPNGISEVQKHSEGNSNEDQMHWFTEKPGEIISVTNGVH 250
           K+ +  N +++ Q     N   + +HW     GEI+ VTNG H
Sbjct: 122 KRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVGEIVKVTNGEH 164


>sp|Q09259|YQB6_CAEEL Uncharacterized protein C30G12.6
           OS=Caenorhabditis elegans GN=C30G12.6 PE=2 SV=2
          Length = 1100

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = -3

Query: 474 SEAALRAAQGNQNGSFFEKLKRFVVPFQQDKSKQSETPNGISE-----VQKHSEGNSNED 310
           S+ A   A   QN SF E       P Q   SKQS+  NG  E     +Q+  E + NE+
Sbjct: 35  SQEASSKANEPQNDSFDE-------PIQSSVSKQSDDANGEDEINEEVIQEQKELDLNEE 87

Query: 309 QMHWFTEKPGEIISVTNGVHKVYS 238
             +  T +   +  +T  + +V++
Sbjct: 88  DFNLLTIEEVPLDVLTARIRRVFT 111


>sp|P0C559|GYRB_MYCSM DNA gyrase subunit B OS=Mycobacterium
           smegmatis GN=gyrB PE=3 SV=1
          Length = 675

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 375 QSETPNGISEVQKHSEGNSNEDQMHWFTEKPGEIISVTN 259
           Q++T  G +EV+   +   NE   HWF   P E  +V N
Sbjct: 370 QTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVN 408


>sp|A0QNE0|GYRB_MYCS2 DNA gyrase subunit B OS=Mycobacterium
           smegmatis GN=gyrB PE=1 SV=1
          Length = 675

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 375 QSETPNGISEVQKHSEGNSNEDQMHWFTEKPGEIISVTN 259
           Q++T  G +EV+   +   NE   HWF   P E  +V N
Sbjct: 370 QTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVN 408


>sp|Q9VZW5|FMAR_DROME FMRFamide receptor OS=Drosophila melanogaster
           GN=FR PE=2 SV=1
          Length = 549

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 166 YGLTHVPFVGCIANSYALSLD--WAKQKSCLLDSVCHVTYENP*TDILLHCFIESR 5
           YG   + F+ C+  S A ++   W          V  VTY  P  D++LHC   SR
Sbjct: 234 YGRAKIYFIVCVCFSLAYNMPRFW---------EVLTVTYPEPGKDVILHCVRPSR 280


>sp|Q02084|A33_PLEWA Zinc-binding protein A33 OS=Pleurodeles waltlii
           PE=1 SV=2
          Length = 625

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 438 NGSFFEKLKRFVVPFQQDKSKQSE 367
           NGSF EKL  ++ PF QD  K +E
Sbjct: 593 NGSFTEKLYPYLSPFLQDSGKNAE 616
tr_hit_id B6Y1J6
Definition tr|B6Y1J6|B6Y1J6_ANATH Putative uncharacterized protein OS=Anaerocellum thermophilum DSM 6725
Align length 95
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915712|Adiantum capillus-veneris mRNA, clone:
YMU001_000074_H07.
         (488 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6Y1J6|B6Y1J6_ANATH Putative uncharacterized protein OS=Anaer...    35   1.4  
tr|Q6GFW7|Q6GFW7_STAAR FtsK/SpoIIIE family protein OS=Staphyloco...    33   5.5  
tr|A2FFV0|A2FFV0_TRIVA Clan SB, family S8, subtilisin-like serin...    33   7.2  
tr|Q99TC3|Q99TC3_STAAM DNA translocase stage III sporulation pro...    33   9.3  
tr|Q8NW31|Q8NW31_STAAW MW1684 protein OS=Staphylococcus aureus (...    33   9.3  
tr|Q7A530|Q7A530_STAAN SA1562 protein OS=Staphylococcus aureus (...    33   9.3  
tr|Q6G8I6|Q6G8I6_STAAS FtsK/SpoIIIE family protein OS=Staphyloco...    33   9.3  
tr|Q5HF33|Q5HF33_STAAC FtsK/SpoIIIE family protein OS=Staphyloco...    33   9.3  
tr|Q2YTJ5|Q2YTJ5_STAAB SpoIIIE family cell division protein OS=S...    33   9.3  
tr|Q2FXI9|Q2FXI9_STAA8 Putative uncharacterized protein OS=Staph...    33   9.3  
tr|Q2FFZ7|Q2FFZ7_STAA3 FtsK/SpoIIIE family protein OS=Staphyloco...    33   9.3  
tr|A8Z4G8|A8Z4G8_STAAT DNA translocase OS=Staphylococcus aureus ...    33   9.3  
tr|A7X3H6|A7X3H6_STAA1 DNA translocase stage III sporulation pro...    33   9.3  
tr|A6U2K7|A6U2K7_STAA2 Cell division protein FtsK/SpoIIIE OS=Sta...    33   9.3  
tr|A6QHS4|A6QHS4_STAAE FtsK/SpoIIIE (DNA translocase stage III) ...    33   9.3  
tr|A5ITR3|A5ITR3_STAA9 Cell divisionFtsK/SpoIIIE OS=Staphylococc...    33   9.3  
tr|Q7SEL4|Q7SEL4_NEUCR Predicted protein OS=Neurospora crassa GN...    33   9.3  

>tr|B6Y1J6|B6Y1J6_ANATH Putative uncharacterized protein
           OS=Anaerocellum thermophilum DSM 6725 GN=AtheDRAFT_1347
           PE=4 SV=1
          Length = 411

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
 Frame = +1

Query: 199 SYLICYSHLIWRIGVDFMYSIGDRNNFPRFLRKPVHLIFI*V-----------AFTMFLH 345
           +YLI  S L + +    +Y  GD  N   F+ K +  +FI             +FT+FL 
Sbjct: 107 NYLISRSFLFYFLYKIMIYIFGD--NLHSFITKEILFLFIVTDIFSESIKFICSFTLFLK 164

Query: 346 LTYAVRCLGLFRFILLKWDHKPFQLLKERPILIAL 450
            ++ ++ L L  F+LL +      +LKE+  LI L
Sbjct: 165 YSFIIKTLSLLTFVLLVY------VLKEKVFLILL 193


>tr|Q6GFW7|Q6GFW7_STAAR FtsK/SpoIIIE family protein
           OS=Staphylococcus aureus (strain MRSA252) GN=SAR1819
           PE=4 SV=1
          Length = 1274

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNIYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|A2FFV0|A2FFV0_TRIVA Clan SB, family S8, subtilisin-like serine
           peptidase OS=Trichomonas vaginalis G3 GN=TVAG_227060
           PE=4 SV=1
          Length = 955

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
 Frame = -3

Query: 462 LRAAQG----NQNGSFFEKLKRFVVPFQQDKSKQSETPNGISEVQKHSEGNSNEDQMHWF 295
           +RA QG    N N  F      F V +  DKS     PN IS +Q+H            F
Sbjct: 104 IRAYQGWTPDNPNVKFTSLGFGFFVVYNADKSDYINDPNIIS-IQEHHPNELENRFSVGF 162

Query: 294 TEKPGEIISVTNGVHKVYSNPPNKMRITDEVRV 196
            + P  I+   +  H + + P +K+ +T + ++
Sbjct: 163 IQNPNNILPEIDNKHNMIARPLHKLGLTGKGQI 195


>tr|Q99TC3|Q99TC3_STAAM DNA translocase stage III sporulation prot
           homolog OS=Staphylococcus aureus (strain Mu50 / ATCC
           700699) GN=SAV1741 PE=4 SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q8NW31|Q8NW31_STAAW MW1684 protein OS=Staphylococcus aureus
           (strain MW2) GN=MW1684 PE=4 SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q7A530|Q7A530_STAAN SA1562 protein OS=Staphylococcus aureus
           (strain N315) GN=SA1562 PE=4 SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q6G8I6|Q6G8I6_STAAS FtsK/SpoIIIE family protein
           OS=Staphylococcus aureus (strain MSSA476) GN=SAS1667
           PE=4 SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q5HF33|Q5HF33_STAAC FtsK/SpoIIIE family protein
           OS=Staphylococcus aureus (strain COL) GN=SACOL1791 PE=4
           SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKPKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q2YTJ5|Q2YTJ5_STAAB SpoIIIE family cell division protein
           OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
           GN=SAB1601c PE=4 SV=1
          Length = 1276

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKAHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166


>tr|Q2FXI9|Q2FXI9_STAA8 Putative uncharacterized protein
           OS=Staphylococcus aureus (strain NCTC 8325)
           GN=SAOUHSC_01857 PE=4 SV=1
          Length = 1274

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
 Frame = -3

Query: 360 NGISEVQKHSE--GNSN--------EDQMHWFTEKPGEIISVTNGV---------HKVYS 238
           N  +E Q +SE  GNS         +D  H+ T KPG  +S  NG+         H +YS
Sbjct: 103 NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKPKTHNMYS 162

Query: 237 NPPN 226
           N  N
Sbjct: 163 NNTN 166