BP915722
Clone id YMU001_000076_A09
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCAGAAGACTATCCTGTGAGCAAGTATTCTAGTGTGACTTCATTCAGTCAAGCCGACATC
TCGCCTATCCAGGTACCTACTTGATTTTGCTAGATCTCTTGATTCTGGTCATCATTGATG
GTTTTCTTGCATATACAAGAACGGATATATGCACACCAAATGATGATCCGATAGTGCTTA
TGTTGGGCATATGCATGATAGCTATGACTTACAGCCATAGAGCCAATATGGGCTCATTCC
TGAGCTTGGAAGCCTGCAGCCAATGGGCTAGCCTCTACCACAAGGGCTGGTGTCCCATAC
CACCAAGCCCACACTGATAAGGGTGTGTGAGTAGATCTGCCAAGGGCTCAGGTCCAAGAG
TGGTGATAGTGCATCATGTGTAGCTATGTGCGTGCGTCGTGTGCATTTGATTTGATTTGT
TTACTTGCTATTTGTCATCATCAAGATCGTGCATAGAACGTATCGGGCTGATTGCAAGTA
TAAGGGATGGAGGAATCCA
■■Homology search results ■■ -
sp_hit_id Q9FGD7
Definition sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
Align length 42
Score (bit) 30.8
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915722|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_A09.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 5... 31 3.6

>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50
OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1
Length = 765

Score = 30.8 bits (68), Expect = 3.6
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3

Query: 156 PNDDPIVLMLGICMIAMTYSHRANMGSFLSLEACSQWASLYH 281
PND P V M I M H A G LEA +W S+ H
Sbjct: 686 PNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGH 727


tr_hit_id A7SCZ5
Definition tr|A7SCZ5|A7SCZ5_NEMVE Predicted protein OS=Nematostella vectensis
Align length 41
Score (bit) 33.9
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915722|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_A09.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7SCZ5|A7SCZ5_NEMVE Predicted protein OS=Nematostella vectens... 34 4.4
tr|B8PLA3|B8PLA3_9APHY Predicted protein OS=Postia placenta Mad-... 34 4.4
tr|Q0ARS2|Q0ARS2_MARMM Putative uncharacterized protein OS=Maric... 33 5.7
tr|Q3AP30|Q3AP30_CHLCH TPR repeat OS=Chlorobium chlorochromatii ... 33 9.8

>tr|A7SCZ5|A7SCZ5_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g229921 PE=4 SV=1
Length = 398

Score = 33.9 bits (76), Expect = 4.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2

Query: 362 GDSASCVAMCVR--RVHLI*FVYLLFVIIKIVHRTYRADCK 478
GD C+A C H++ + YL+++ + +VHR+YR D +
Sbjct: 333 GDLMGCLAYCAACGTGHVLPYFYLIYMTVLLVHRSYRDDVR 373


>tr|B8PLA3|B8PLA3_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_99925 PE=4 SV=1
Length = 608

Score = 33.9 bits (76), Expect = 4.4
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1

Query: 217 WL*VIAIMHMPNISTIGSSFGVHISVLVYARKPSMMTRIKRSSKI 83
WL +A MH+P + +FG I+ L + +P + ++R++ I
Sbjct: 10 WLWAVAEMHLPLFKPLNIAFGAFITTLTLSHRPRLCRHLRRATPI 54


>tr|Q0ARS2|Q0ARS2_MARMM Putative uncharacterized protein
OS=Maricaulis maris (strain MCS10) GN=Mmar10_0722 PE=4
SV=1
Length = 696

Score = 33.5 bits (75), Expect = 5.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1

Query: 370 TITTLGPEPLADLLTHPYQCGLGGMGHQPLW*RLAHWLQASKLRNEPIL 224
T T PEP L HP GL G G P W R + + L E +L
Sbjct: 415 TETPFTPEPTDTGLRHPVTAGLAGGGETPQWGRWLRHIHGTALGGETLL 463


>tr|Q3AP30|Q3AP30_CHLCH TPR repeat OS=Chlorobium chlorochromatii
(strain CaD3) GN=Cag_1997 PE=4 SV=1
Length = 248

Score = 32.7 bits (73), Expect = 9.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3

Query: 234 SFLSLEACSQWASLYHKGWCPIPPSP 311
+ L QW + YH W P+PPSP
Sbjct: 168 ALLGDRTAEQWLNTYHPNWKPVPPSP 193