BP915726 |
Clone id |
YMU001_000076_B02 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_B02. |
Accession |
BP915726 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCTGTTTTTGCTGGATGGTACTGGTTCAGTTGAATACCTAGTTTCCAAGCAAAACCTCCG GAGACAGCCAGCCACCATATAATGCCTATCTAACCTTGACCAATGATCAGTCTCCTGAAC TGGAAGCACATGTTTTTGCAGAAAATATACATGTGCTGCTTGCTCATTGCTTCAGCAATC ACTGCTTACTGGACTCAGATGCTGAGTTAGGCCGTGATTGGGATGCTGCAGAAGCGTTAC CTGTTGGTTGAACAGAAGGTGCACAAGACAGCTTTCTGCACCCAAGATTGGCCACTAGGC CAATCTGTAAACCCTCCAGGGTTTTTGCTTCTAGTCTGGCAATGGACCTTTGAAGTTGTC CCTTCTTTGACTCCGACGAACCACCATCCATTTGACAATTTGATCCTGTCCTTTGTGGAG TTTCTTGCCTTTCATTAACTTGCAATATGGAGCTTTTGTCCTTGTGATTCATGCTTACAA CTGGGGAGCCAGTGCAACACACATATCTCTCTGGACCGTGTGTATCTGTCCTTTCTGATG CTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O54827 |
Definition |
sp|O54827|AT10A_MOUSE Probable phospholipid-transporting ATPase VA OS=Mus musculus |
Align length |
71 |
Score (bit) |
33.5 |
E-value |
0.69 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5BLF2 |
Definition |
tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio |
Align length |
95 |
Score (bit) |
35.4 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915726|Adiantum capillus-veneris mRNA, clone: YMU001_000076_B02. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio GN=zgc:112971 P... 35 2.0 tr|A4H4R2|A4H4R2_LEIBR Putative uncharacterized protein OS=Leish... 35 2.0 tr|B8ME74|B8ME74_9EURO C2H2 transcription factor (Seb1), putativ... 27 4.2 tr|Q6A046|Q6A046_MOUSE MKIAA0566 protein (Fragment) OS=Mus muscu... 33 7.4 tr|Q3V1Y7|Q3V1Y7_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.4 tr|Q3TA23|Q3TA23_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.4 tr|B4HJ40|B4HJ40_DROSE GM24436 OS=Drosophila sechellia GN=GM2443... 33 7.4 tr|Q1D2V1|Q1D2V1_MYXXD Adventurous gliding motility protein AgmK... 33 9.7 tr|B1Y3E5|B1Y3E5_LEPCP Carbohydrate kinase FGGY OS=Leptothrix ch... 33 9.7 tr|A9H0K5|A9H0K5_9RHOB Putative uncharacterized protein OS=Roseo... 33 9.7
>tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio GN=zgc:112971 PE=2 SV=1 Length = 549
Score = 35.4 bits (80), Expect = 2.0 Identities = 25/95 (26%), Positives = 47/95 (49%) Frame = -3
Query: 469 NHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVA 290 ++K+K + ++VN T + Q+ G K + R +L+ + +GLQ + Sbjct: 261 SYKEKINQIEVNVHTLTAEIAALESQLSG------KEEALRPAKQLQ-QVRKGLQTSAAS 313
Query: 289 NLGCRKLSCAPSVQPTGNASAASQSRPNSASESSK 185 N + PS T ++SAAS ++P SA+ ++K Sbjct: 314 NANKTHPALKPSASATKSSSAASATKPTSATSATK 348
>tr|A4H4R2|A4H4R2_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis GN=LbrM06_V2.0970 PE=4 SV=1 Length = 1217
Score = 35.4 bits (80), Expect = 2.0 Identities = 36/106 (33%), Positives = 45/106 (42%) Frame = -3
Query: 505 YVCCTGSPVVSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEA 326 Y C TG V S+ + + E E P T GG+ + G L S A Sbjct: 146 YSCVTGQFVTSLRPLHEEVAARQVELSELPLNTSCRKATSGGAKGTASG-LLTSHCGTAA 204
Query: 325 KTLEGLQIGLVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESS 188 T GLV+ G R+LS APS G A+ +S PN AS SS Sbjct: 205 PTPRSR--GLVSTRGGRRLS-APS--SAGGAAHPYESAPNRASASS 245
>tr|B8ME74|B8ME74_9EURO C2H2 transcription factor (Seb1), putative OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_015850 PE=4 SV=1 Length = 610
Score = 27.3 bits (59), Expect(2) = 4.2 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -2
Query: 374 GVKEGTTSKVHCQTRSKNPGGFTDWP 297 GVKEG S+VH + +K G TD P Sbjct: 147 GVKEGCESEVHAEILAKPDWGRTDSP 172
Score = 25.4 bits (54), Expect(2) = 4.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -3
Query: 298 LVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESSK 185 L AN+ C LS +PS PTG + PNS S +S+ Sbjct: 192 LSANVSCPSLSPSPSPGPTGLLT------PNSISFTSE 223
>tr|Q6A046|Q6A046_MOUSE MKIAA0566 protein (Fragment) OS=Mus musculus GN=Atp10a PE=2 SV=1 Length = 1521
Score = 33.5 bits (75), Expect = 7.4 Identities = 25/71 (35%), Positives = 32/71 (45%) Frame = -3
Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251 R+ TP R S C G S SK S A L + + + + +GL LG APS+ Sbjct: 628 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 682
Query: 250 QPTGNASAASQ 218 G AS A Q Sbjct: 683 ASNGYASQAGQ 693
>tr|Q3V1Y7|Q3V1Y7_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Atp10a PE=2 SV=1 Length = 1508
Score = 33.5 bits (75), Expect = 7.4 Identities = 25/71 (35%), Positives = 32/71 (45%) Frame = -3
Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251 R+ TP R S C G S SK S A L + + + + +GL LG APS+ Sbjct: 615 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 669
Query: 250 QPTGNASAASQ 218 G AS A Q Sbjct: 670 ASNGYASQAGQ 680
>tr|Q3TA23|Q3TA23_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Atp10a PE=2 SV=1 Length = 1508
Score = 33.5 bits (75), Expect = 7.4 Identities = 25/71 (35%), Positives = 32/71 (45%) Frame = -3
Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251 R+ TP R S C G S SK S A L + + + + +GL LG APS+ Sbjct: 615 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 669
Query: 250 QPTGNASAASQ 218 G AS A Q Sbjct: 670 ASNGYASQAGQ 680
>tr|B4HJ40|B4HJ40_DROSE GM24436 OS=Drosophila sechellia GN=GM24436 PE=4 SV=1 Length = 310
Score = 33.5 bits (75), Expect = 7.4 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 7/128 (5%) Frame = -3
Query: 478 VSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQR-SIARLEAKTLEGLQI 302 +S + SS L + E+QE Q Q + +SK+ + R S +RL ++ L+ Sbjct: 141 MSCASSETSSTLDIEEQQEQMQHQQLQQQQ---AQQSKRKPISRASFSRLHRRSTSSLRR 197
Query: 301 GLVA-NLGCRKLSCA-----PSVQPTGNASAASQSRPNSASESSKQ*LLKQ*ASSTCIFS 140 + +L R LSC+ P + P G AA+ ++ +S L +Q T S Sbjct: 198 AFESLSLTSRSLSCSGPSPPPPLPPAGAQPAAALPLKSALKSASNVELHRQQKQPTGRSS 257
Query: 139 AKTCASSS 116 + C S+S Sbjct: 258 SSCCGSAS 265
>tr|Q1D2V1|Q1D2V1_MYXXD Adventurous gliding motility protein AgmK OS=Myxococcus xanthus (strain DK 1622) GN=agmK PE=4 SV=1 Length = 3822
Score = 33.1 bits (74), Expect = 9.7 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +3
Query: 186 LLDSDAELGRDWDAAEALPVG*TEGAQDSFLHPRLA 293 L+D ++ELGRD AAEAL + GA++ PRLA Sbjct: 648 LVDLNSELGRDAQAAEALQSALSHGAEEGRHLPRLA 683
>tr|B1Y3E5|B1Y3E5_LEPCP Carbohydrate kinase FGGY OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=Lcho_2207 PE=4 SV=1 Length = 483
Score = 33.1 bits (74), Expect = 9.7 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = -2
Query: 386 WWFVGVKEGTTSKVHCQTRSKNP--GGFTDW 300 WWF GV S + C T +P GGF+DW Sbjct: 169 WWFSGVAASEVSSLGCHTGLWSPQRGGFSDW 199
>tr|A9H0K5|A9H0K5_9RHOB Putative uncharacterized protein OS=Roseobacter litoralis Och 149 GN=RLO149_01747 PE=4 SV=1 Length = 390
Score = 33.1 bits (74), Expect = 9.7 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2
Query: 431 KARNSTKDRIKLSNGWWFVGVKEGTTSKVHCQTRSKNPGG 312 + + +D +K NG+ F VK+G T++VHC+T GG Sbjct: 122 RLQTQAQDFVKTVNGYEFNLVKDGQTTRVHCKTLVIASGG 161
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