BP915726
Clone id YMU001_000076_B02
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCTGTTTTTGCTGGATGGTACTGGTTCAGTTGAATACCTAGTTTCCAAGCAAAACCTCCG
GAGACAGCCAGCCACCATATAATGCCTATCTAACCTTGACCAATGATCAGTCTCCTGAAC
TGGAAGCACATGTTTTTGCAGAAAATATACATGTGCTGCTTGCTCATTGCTTCAGCAATC
ACTGCTTACTGGACTCAGATGCTGAGTTAGGCCGTGATTGGGATGCTGCAGAAGCGTTAC
CTGTTGGTTGAACAGAAGGTGCACAAGACAGCTTTCTGCACCCAAGATTGGCCACTAGGC
CAATCTGTAAACCCTCCAGGGTTTTTGCTTCTAGTCTGGCAATGGACCTTTGAAGTTGTC
CCTTCTTTGACTCCGACGAACCACCATCCATTTGACAATTTGATCCTGTCCTTTGTGGAG
TTTCTTGCCTTTCATTAACTTGCAATATGGAGCTTTTGTCCTTGTGATTCATGCTTACAA
CTGGGGAGCCAGTGCAACACACATATCTCTCTGGACCGTGTGTATCTGTCCTTTCTGATG
CTC
■■Homology search results ■■ -
sp_hit_id O54827
Definition sp|O54827|AT10A_MOUSE Probable phospholipid-transporting ATPase VA OS=Mus musculus
Align length 71
Score (bit) 33.5
E-value 0.69
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915726|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_B02.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O54827|AT10A_MOUSE Probable phospholipid-transporting ATPase ... 33 0.69
sp|P40552|TIR3_YEAST Cell wall protein TIR3 OS=Saccharomyces cer... 32 2.6
sp|Q01168|NUT1_MAGGR Nitrogen regulatory protein NUT1 OS=Magnapo... 32 2.6
sp|Q9DE07|NBN_CHICK Nibrin OS=Gallus gallus GN=NBN PE=1 SV=1 32 2.6
sp|A5EGF4|COBT_BRASB Nicotinate-nucleotide--dimethylbenzimidazol... 31 4.5
sp|Q03350|TSP2_MOUSE Thrombospondin-2 OS=Mus musculus GN=Thbs2 P... 30 5.8
sp|Q14669|TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP1... 30 7.6
sp|Q84JI0|P2C30_ORYSJ Probable protein phosphatase 2C 30 OS=Oryz... 30 7.6
sp|O13127|FLOT1_CARAU Flotillin-1 OS=Carassius auratus GN=flot1 ... 30 7.6
sp|Q7TD09|CAPSD_CYLCV Capsid protein OS=Cestrum yellow leaf curl... 30 9.9
sp|P17373|VB21_VACCW Protein B21 OS=Vaccinia virus (strain Weste... 30 9.9
sp|Q9P2S2|NRX2A_HUMAN Neurexin-2-alpha OS=Homo sapiens GN=NRXN2 ... 30 9.9
sp|P49050|NIA_PICAN Nitrate reductase [NADPH] OS=Pichia angusta ... 30 9.9
sp|Q10719|FUS1_SCHPO Cell fusion protein fus1 OS=Schizosaccharom... 30 9.9

>sp|O54827|AT10A_MOUSE Probable phospholipid-transporting ATPase VA
OS=Mus musculus GN=Atp10a PE=1 SV=4
Length = 1508

Score = 33.5 bits (75), Expect = 0.69
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = -3

Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251
R+ TP R S C G S SK S A L + + + + +GL LG APS+
Sbjct: 615 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 669

Query: 250 QPTGNASAASQ 218
G AS A Q
Sbjct: 670 ASNGYASQAGQ 680


>sp|P40552|TIR3_YEAST Cell wall protein TIR3 OS=Saccharomyces
cerevisiae GN=TIR3 PE=3 SV=1
Length = 269

Score = 31.6 bits (70), Expect = 2.6
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = -3

Query: 478 VSMNHKD---KSSILQVNERQETP---QRTGSNCQMDGGSSESKKGQLQRSIARLEAKTL 317
++MN+ D S +L V + T T +MD + Q+ +RLE + +
Sbjct: 49 LAMNNPDFTLPSGVLDVYQHMTTATDDSYTSYFTEMDFAQITTAMVQVPWYSSRLEPEII 108

Query: 316 EGLQIGLVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESSKQ*LLKQ*ASSTCIFSA 137
LQ + G S +V +G+ SA + S +SASESS ASS+ S+
Sbjct: 109 AALQ-----SAGISITSLGQTVSESGSESATASSDASSASESSSA------ASSSASESS 157

Query: 136 KTCASSSGD 110
+SS+ +
Sbjct: 158 SAASSSASE 166


>sp|Q01168|NUT1_MAGGR Nitrogen regulatory protein NUT1
OS=Magnaporthe grisea GN=NUT1 PE=4 SV=1
Length = 956

Score = 31.6 bits (70), Expect = 2.6
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -3

Query: 409 TGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSVQPTGNAS 230
+GSN S SKKG +++ + L I A+ +++ P++ P
Sbjct: 714 SGSNVPGATSGSRSKKGATSTAVSGTNTRKNSSLAISRTASTTNVQVAPTPAIAP----- 768

Query: 229 AASQSRPNSASE 194
AASQSR SA+E
Sbjct: 769 AASQSRAGSANE 780


>sp|Q9DE07|NBN_CHICK Nibrin OS=Gallus gallus GN=NBN PE=1 SV=1
Length = 753

Score = 31.6 bits (70), Expect = 2.6
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Frame = -3

Query: 445 LQVNERQETPQRTGSN-CQMDGG-------SSESKKGQLQRSIARLEAKTLEGL---QIG 299
L ER+ET C +D G SES + +A LE+ L + +IG
Sbjct: 248 LMAEERKETSLLVSPEVCVVDVGVTNSQILGSESMRNWTDSILAVLESNNLRAIPEAEIG 307

Query: 298 LVANLGCRKLSCAPSVQPTG---NASAASQSRPNSASESS 188
L ++ C P QP AS AS+ RP S+ S+
Sbjct: 308 LAVIFMSTEIYCNPQRQPDNKAVTASTASKVRPVSSQSST 347


>sp|A5EGF4|COBT_BRASB Nicotinate-nucleotide--dimethylbenzimidazole
phosphoribosyltransferase OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=cobT PE=3 SV=1
Length = 351

Score = 30.8 bits (68), Expect = 4.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3

Query: 120 LEAHVFAENIHVLLAHCFSNHCLLDSDAELGRDWDAAEALPV 245
L +H AE H L+ H L+D D LG AA ALP+
Sbjct: 286 LFSHRSAERGHALVLDALGAHPLIDLDLRLGEASGAATALPI 327


>sp|Q03350|TSP2_MOUSE Thrombospondin-2 OS=Mus musculus GN=Thbs2 PE=2
SV=1
Length = 1172

Score = 30.4 bits (67), Expect = 5.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2

Query: 371 VKEGTTSKVHCQTRSKNPGGFTDWPSGQSWVQKAVLCTFCSTNR*RFCSIPI 216
++ T S C TR + GG++ W W +V C + R R C+ P+
Sbjct: 420 IQTRTCSLGKCDTRIRQNGGWSHW---SPWSSCSVTCGVGNVTRIRLCNSPV 468


>sp|Q14669|TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP12
OS=Homo sapiens GN=TRIP12 PE=1 SV=1
Length = 1992

Score = 30.0 bits (66), Expect = 7.6
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -3

Query: 487 SPVVSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSI--ARLEAKTLE 314
SP S H KS R + +RT S+C G SES G +RS +L +K+
Sbjct: 127 SPSTSKAHTRKSGATG-GSRSQKRKRTESSCVKSGSGSES-TGAEERSAKPTKLASKSAT 184

Query: 313 GLQIGLVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESSK 185
A GC ++ + S T ++S+A S ++ ++
Sbjct: 185 S------AKAGCSTITDSSSAASTSSSSSAVASASSTVPPGAR 221


>sp|Q84JI0|P2C30_ORYSJ Probable protein phosphatase 2C 30 OS=Oryza
sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1
Length = 404

Score = 30.0 bits (66), Expect = 7.6
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -3

Query: 541 ASERTDTHGPERYVCCTGSPVVSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKK 362
A ++ GPE C TGS + + V ER + +G ++DGG E+
Sbjct: 10 AGSSSEGKGPE---CDTGSRAARRRRMEIRRLRVVAERGAEEETSGKRRRLDGGGGEAST 66

Query: 361 GQLQRSIAR 335
+ R + R
Sbjct: 67 DEEDREVER 75


>sp|O13127|FLOT1_CARAU Flotillin-1 OS=Carassius auratus GN=flot1
PE=1 SV=1
Length = 423

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -3

Query: 454 SSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANL 284
+ I Q+ + + Q + CQM G SES IA + +TLEG Q ++A+L
Sbjct: 66 TGIAQMKIQGQNKQMLAAKCQMFLGKSES-------DIAHIALETLEGHQRAIIAHL 115


>sp|Q7TD09|CAPSD_CYLCV Capsid protein OS=Cestrum yellow leaf curling
virus GN=ORF IV PE=3 SV=1
Length = 501

Score = 29.6 bits (65), Expect = 9.9
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Frame = -1

Query: 204 QHLSPVSSDC*SNEQAAHVYFLQKHVLPVQETDHWSRLD-------RHYMVAGCLRRFCL 46
++ S ++ DC N A V + KH L +Q H+ Y G +++F
Sbjct: 147 ENSSILNLDCIDNAPALFVSWTSKHGLELQLNKHFENFSDNEIWNYTQYYTRGSVQKFLS 206

Query: 45 ETRYSTEPVPS 13
E Y T+ P+
Sbjct: 207 EQDYQTDVAPN 217


tr_hit_id Q5BLF2
Definition tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio
Align length 95
Score (bit) 35.4
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915726|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_B02.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio GN=zgc:112971 P... 35 2.0
tr|A4H4R2|A4H4R2_LEIBR Putative uncharacterized protein OS=Leish... 35 2.0
tr|B8ME74|B8ME74_9EURO C2H2 transcription factor (Seb1), putativ... 27 4.2
tr|Q6A046|Q6A046_MOUSE MKIAA0566 protein (Fragment) OS=Mus muscu... 33 7.4
tr|Q3V1Y7|Q3V1Y7_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.4
tr|Q3TA23|Q3TA23_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.4
tr|B4HJ40|B4HJ40_DROSE GM24436 OS=Drosophila sechellia GN=GM2443... 33 7.4
tr|Q1D2V1|Q1D2V1_MYXXD Adventurous gliding motility protein AgmK... 33 9.7
tr|B1Y3E5|B1Y3E5_LEPCP Carbohydrate kinase FGGY OS=Leptothrix ch... 33 9.7
tr|A9H0K5|A9H0K5_9RHOB Putative uncharacterized protein OS=Roseo... 33 9.7

>tr|Q5BLF2|Q5BLF2_DANRE Zgc:112971 OS=Danio rerio GN=zgc:112971 PE=2
SV=1
Length = 549

Score = 35.4 bits (80), Expect = 2.0
Identities = 25/95 (26%), Positives = 47/95 (49%)
Frame = -3

Query: 469 NHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVA 290
++K+K + ++VN T + Q+ G K + R +L+ + +GLQ +
Sbjct: 261 SYKEKINQIEVNVHTLTAEIAALESQLSG------KEEALRPAKQLQ-QVRKGLQTSAAS 313

Query: 289 NLGCRKLSCAPSVQPTGNASAASQSRPNSASESSK 185
N + PS T ++SAAS ++P SA+ ++K
Sbjct: 314 NANKTHPALKPSASATKSSSAASATKPTSATSATK 348


>tr|A4H4R2|A4H4R2_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM06_V2.0970 PE=4 SV=1
Length = 1217

Score = 35.4 bits (80), Expect = 2.0
Identities = 36/106 (33%), Positives = 45/106 (42%)
Frame = -3

Query: 505 YVCCTGSPVVSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEA 326
Y C TG V S+ + + E E P T GG+ + G L S A
Sbjct: 146 YSCVTGQFVTSLRPLHEEVAARQVELSELPLNTSCRKATSGGAKGTASG-LLTSHCGTAA 204

Query: 325 KTLEGLQIGLVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESS 188
T GLV+ G R+LS APS G A+ +S PN AS SS
Sbjct: 205 PTPRSR--GLVSTRGGRRLS-APS--SAGGAAHPYESAPNRASASS 245


>tr|B8ME74|B8ME74_9EURO C2H2 transcription factor (Seb1), putative
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_015850 PE=4
SV=1
Length = 610

Score = 27.3 bits (59), Expect(2) = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2

Query: 374 GVKEGTTSKVHCQTRSKNPGGFTDWP 297
GVKEG S+VH + +K G TD P
Sbjct: 147 GVKEGCESEVHAEILAKPDWGRTDSP 172



Score = 25.4 bits (54), Expect(2) = 4.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3

Query: 298 LVANLGCRKLSCAPSVQPTGNASAASQSRPNSASESSK 185
L AN+ C LS +PS PTG + PNS S +S+
Sbjct: 192 LSANVSCPSLSPSPSPGPTGLLT------PNSISFTSE 223


>tr|Q6A046|Q6A046_MOUSE MKIAA0566 protein (Fragment) OS=Mus musculus
GN=Atp10a PE=2 SV=1
Length = 1521

Score = 33.5 bits (75), Expect = 7.4
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = -3

Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251
R+ TP R S C G S SK S A L + + + + +GL LG APS+
Sbjct: 628 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 682

Query: 250 QPTGNASAASQ 218
G AS A Q
Sbjct: 683 ASNGYASQAGQ 693


>tr|Q3V1Y7|Q3V1Y7_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Atp10a PE=2 SV=1
Length = 1508

Score = 33.5 bits (75), Expect = 7.4
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = -3

Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251
R+ TP R S C G S SK S A L + + + + +GL LG APS+
Sbjct: 615 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 669

Query: 250 QPTGNASAASQ 218
G AS A Q
Sbjct: 670 ASNGYASQAGQ 680


>tr|Q3TA23|Q3TA23_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Atp10a PE=2 SV=1
Length = 1508

Score = 33.5 bits (75), Expect = 7.4
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = -3

Query: 430 RQETPQRTGSNCQMDGGSSESKKGQLQRSIARLEAKTLEGLQIGLVANLGCRKLSCAPSV 251
R+ TP R S C G S SK S A L + + + + +GL LG APS+
Sbjct: 615 RRFTPSRLASGCSSIGNLSTSKSSHKSGS-AFLPSLSQDSMLLGLEEKLG----QTAPSI 669

Query: 250 QPTGNASAASQ 218
G AS A Q
Sbjct: 670 ASNGYASQAGQ 680


>tr|B4HJ40|B4HJ40_DROSE GM24436 OS=Drosophila sechellia GN=GM24436
PE=4 SV=1
Length = 310

Score = 33.5 bits (75), Expect = 7.4
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Frame = -3

Query: 478 VSMNHKDKSSILQVNERQETPQRTGSNCQMDGGSSESKKGQLQR-SIARLEAKTLEGLQI 302
+S + SS L + E+QE Q Q + +SK+ + R S +RL ++ L+
Sbjct: 141 MSCASSETSSTLDIEEQQEQMQHQQLQQQQ---AQQSKRKPISRASFSRLHRRSTSSLRR 197

Query: 301 GLVA-NLGCRKLSCA-----PSVQPTGNASAASQSRPNSASESSKQ*LLKQ*ASSTCIFS 140
+ +L R LSC+ P + P G AA+ ++ +S L +Q T S
Sbjct: 198 AFESLSLTSRSLSCSGPSPPPPLPPAGAQPAAALPLKSALKSASNVELHRQQKQPTGRSS 257

Query: 139 AKTCASSS 116
+ C S+S
Sbjct: 258 SSCCGSAS 265


>tr|Q1D2V1|Q1D2V1_MYXXD Adventurous gliding motility protein AgmK
OS=Myxococcus xanthus (strain DK 1622) GN=agmK PE=4 SV=1
Length = 3822

Score = 33.1 bits (74), Expect = 9.7
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3

Query: 186 LLDSDAELGRDWDAAEALPVG*TEGAQDSFLHPRLA 293
L+D ++ELGRD AAEAL + GA++ PRLA
Sbjct: 648 LVDLNSELGRDAQAAEALQSALSHGAEEGRHLPRLA 683


>tr|B1Y3E5|B1Y3E5_LEPCP Carbohydrate kinase FGGY OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)
GN=Lcho_2207 PE=4 SV=1
Length = 483

Score = 33.1 bits (74), Expect = 9.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2

Query: 386 WWFVGVKEGTTSKVHCQTRSKNP--GGFTDW 300
WWF GV S + C T +P GGF+DW
Sbjct: 169 WWFSGVAASEVSSLGCHTGLWSPQRGGFSDW 199


>tr|A9H0K5|A9H0K5_9RHOB Putative uncharacterized protein
OS=Roseobacter litoralis Och 149 GN=RLO149_01747 PE=4
SV=1
Length = 390

Score = 33.1 bits (74), Expect = 9.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2

Query: 431 KARNSTKDRIKLSNGWWFVGVKEGTTSKVHCQTRSKNPGG 312
+ + +D +K NG+ F VK+G T++VHC+T GG
Sbjct: 122 RLQTQAQDFVKTVNGYEFNLVKDGQTTRVHCKTLVIASGG 161