BP915730 |
Clone id |
YMU001_000076_B08 |
Library |
YMU01 |
Length |
573 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_B08. |
Accession |
BP915730 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3485Contig1 |
Sequence |
GCTCACAACATGAGCCTTGTTCAAAGCCAAAGGGCTCCCAATGCACATTGATGTGCACAC CATGGCCATCACTGGCATGACAGGCCGGATCACGTCAACTGCTGGCTTCGCATATGTGTT CAATCCAAGGCCCAGCATCACAGGGCATAGAACAATCTGCAATATAGATTTGGCCATGGC AATGCCATCAACTGGGACCACGGATCCGATAAGTAGCCATGTCAGCAGCGGTGTGACAAT TGCAGACGTGATCGTCGAAGGGCTTGTTAAGATAATGCTCAATGCTACATCTCCGTCACT CAAGTAACTCGCGTAACTAGACAACTGAGCACCAGCCACACACGCCATGAGTATGAACCC AGAATAAAAAGCTGCAGGCATGTTGAAAAGCTTGGCAACGAGAACGCCAAGAAGTGGCTT GAAAGCATATTGTGCTATGTATCCAACCAAAACTGGCTTTGGCCTCTTTAAGACGATTTC AAAATCCTTGATAGAAAGTTGGACACCGATCGACAACATGATTCCTCCAAGAGCTGGAGC ATAATACTCCTTGCTCACCCACGTGAATGTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O34524 |
Definition |
sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis |
Align length |
190 |
Score (bit) |
86.7 |
E-value |
8.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915730|Adiantum capillus-veneris mRNA, clone: YMU001_000076_B08. (573 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporte... 87 8e-17 sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus mu... 56 1e-07 sp|Q5PT56|NTCP4_RAT Sodium/bile acid cotransporter 4 OS=Rattus n... 55 3e-07 sp|Q28727|NTCP2_RABIT Ileal sodium/bile acid cotransporter OS=Or... 53 1e-06 sp|Q12908|NTCP2_HUMAN Ileal sodium/bile acid cotransporter OS=Ho... 53 1e-06 sp|Q96EP9|NTCP4_HUMAN Sodium/bile acid cotransporter 4 OS=Homo s... 53 1e-06 sp|P26435|NTCP_RAT Sodium/bile acid cotransporter OS=Rattus norv... 52 2e-06 sp|O08705|NTCP_MOUSE Sodium/bile acid cotransporter OS=Mus muscu... 52 3e-06 sp|Q14973|NTCP_HUMAN Sodium/bile acid cotransporter OS=Homo sapi... 50 1e-05 sp|Q4JLT5|NTCP5_RAT Sodium/bile acid cotransporter 5 OS=Rattus n... 49 1e-05 sp|Q62633|NTCP2_RAT Ileal sodium/bile acid cotransporter OS=Ratt... 49 2e-05 sp|Q60414|NTCP2_CRIGR Ileal sodium/bile acid cotransporter OS=Cr... 49 2e-05 sp|P70172|NTCP2_MOUSE Ileal sodium/bile acid cotransporter OS=Mu... 47 5e-05 sp|Q3KNW5|SOAT_HUMAN Solute carrier family 10 member 6 OS=Homo s... 46 2e-04 sp|P09131|P3_HUMAN P3 protein OS=Homo sapiens GN=SLC10A3 PE=2 SV=1 45 2e-04 sp|Q5PT55|NTCP5_HUMAN Sodium/bile acid cotransporter 5 OS=Homo s... 45 2e-04 sp|A6QP84|SOAT_BOVIN Solute carrier family 10 member 6 OS=Bos ta... 45 3e-04 sp|P21129|P3_MOUSE P3 protein OS=Mus musculus GN=Slc10a3 PE=2 SV=2 45 3e-04 sp|Q0V8N6|P3_BOVIN P3 protein OS=Bos taurus GN=SLC10A3 PE=2 SV=1 45 3e-04 sp|Q5PT54|NTCP5_MOUSE Sodium/bile acid cotransporter 5 OS=Mus mu... 45 3e-04 sp|P74311|Y944_SYNY3 Uncharacterized transporter slr0944 OS=Syne... 34 0.46 sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1 31 5.0 sp|Q64TC3|Y2507_BACFR Uncharacterized transporter BF2507 OS=Bact... 30 8.6
>sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis GN=yocS PE=3 SV=1 Length = 321
Score = 86.7 bits (213), Expect = 8e-17 Identities = 54/190 (28%), Positives = 97/190 (51%) Frame = -1
Query: 573 STFTWVSKEYYAPALGGIMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVA 394 S FTW+S Y LG IM +G+ L DF+ ++++P V++G IAQY PL+ +A Sbjct: 31 SLFTWISS-YITIFLGIIMFGMGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLA 89
Query: 393 KLFNMPAAFYSGFILMACVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWL 214 ++PA G IL+ C G S+ ++L+ G+ +VTPLL L Sbjct: 90 FGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIML 149
Query: 213 LIGSVVPVDGIAMAKSILQIVLCPVMLGLGLNTYAKPAVDVIRPVMPVMAMVCTSMCIGS 34 +PV ++ SILQ VL P++ GL + + + V +P+++++ + + Sbjct: 150 FAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSVIGIVAIVSA 209
Query: 33 PLALNKAHVV 4 ++ N+ +++ Sbjct: 210 VVSGNRENLL 219
>sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus musculus GN=Slc10a4 PE=2 SV=1 Length = 437
Score = 56.2 bits (134), Expect = 1e-07 Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 1/148 (0%) Frame = -1
Query: 546 YYAPALGGIMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAF 367 + AL ML +G + + F ++RP L+ + Q+ F PLL L+A +F + Sbjct: 108 FVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALIFKLDEVA 167
Query: 366 YSGFILMACVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSVVPVD 187 +L C G LS+ S L DGD+ ++ PL W+ + + Sbjct: 168 AVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSRAWINTP 227
Query: 186 GIAMAK-SILQIVLCPVMLGLGLNTYAK 106 + + + + LC ++ +GL + + Sbjct: 228 LVQLLPLGAVTLTLCSTLIPIGLGVFIR 255
>sp|Q5PT56|NTCP4_RAT Sodium/bile acid cotransporter 4 OS=Rattus norvegicus GN=Slc10a4 PE=2 SV=1 Length = 437
Score = 55.1 bits (131), Expect = 3e-07 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -1
Query: 546 YYAPALGGIMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAF 367 + AL ML +G + + F ++RP L+ + Q+ F PLL L+A F + Sbjct: 108 FVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALAFKLDEVA 167
Query: 366 YSGFILMACVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSVVPVD 187 +L C G LS+ S L DGD+ ++ PL W+ + + Sbjct: 168 AVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSRAWINTP 227
Query: 186 GIAMAK-SILQIVLCPVMLGLGLNTYAK 106 + + + + LC ++ +GL + + Sbjct: 228 LVQLLPLGAVTLTLCSTLIPIGLGVFIR 255
>sp|Q28727|NTCP2_RABIT Ileal sodium/bile acid cotransporter OS=Oryctolagus cuniculus GN=SLC10A2 PE=2 SV=1 Length = 347
Score = 53.1 bits (126), Expect = 1e-06 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%) Frame = -1
Query: 522 IMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMA 343 +M S+G + IK F ++RP + +G++ Q+ PL G ++A F + ++M Sbjct: 46 VMFSMGCNVEIKKFLGHIRRPWGIFIGFLCQFGIMPLTGFVLAVAFGIMPIQAVVVLIMG 105
Query: 342 CVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLL------TWLLIGS-VVPVDG 184 C G S+ +Y DGD+ + PL W+ G+ V+P D Sbjct: 106 CCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLYVYTKMWVDSGTIVIPYDN 165
Query: 183 IAMAKSILQIVLCPVMLGLGLN 118 I + L ++ PV +G+ +N Sbjct: 166 IGTS---LVALVVPVSIGMFVN 184
>sp|Q12908|NTCP2_HUMAN Ileal sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A2 PE=1 SV=1 Length = 348
Score = 53.1 bits (126), Expect = 1e-06 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Frame = -1
Query: 522 IMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMA 343 +M S+G + IK F +KRP + VG++ Q+ PL G +++ F++ +++ Sbjct: 45 VMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIG 104
Query: 342 CVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLL------TWLLIGS-VVPVDG 184 C G S+ +Y DGD+ + PL W+ GS V+P D Sbjct: 105 CCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDN 164
Query: 183 IAMAKSILQIVLCPVMLGLGLN 118 I + L ++ PV +G+ +N Sbjct: 165 IGTS---LVALVVPVSIGMFVN 183
>sp|Q96EP9|NTCP4_HUMAN Sodium/bile acid cotransporter 4 OS=Homo sapiens GN=SLC10A4 PE=2 SV=2 Length = 437
Score = 52.8 bits (125), Expect = 1e-06 Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Frame = -1
Query: 546 YYAPALGGIMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAF 367 + AL ML +G + + F ++RP L+ + Q+ PLL L+A F + Sbjct: 108 FVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVA 167
Query: 366 YSGFILMACVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSVVPVD 187 +L C G LS+ S L DGD+ ++ PL W+ + + Sbjct: 168 AVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTP 227
Query: 186 GIAMAK-SILQIVLCPVMLGLGLNTYAK 106 + + + + LC ++ +GL + + Sbjct: 228 IVQLLPLGTVTLTLCSTLIPIGLGVFIR 255
>sp|P26435|NTCP_RAT Sodium/bile acid cotransporter OS=Rattus norvegicus GN=Slc10a1 PE=2 SV=1 Length = 362
Score = 52.0 bits (123), Expect = 2e-06 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%) Frame = -1
Query: 522 IMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMA 343 IMLS+G + + L +PK V+V +AQ+ PL L+ K+F++ ++ Sbjct: 38 IMLSLGCTMEFSKIKAHLWKPKGVIVALVAQFGIMPLAAFLLGKIFHLSNIEALAILICG 97
Query: 342 CVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSV--------VPVD 187 C G LS+ + GD+ + PLL ++ + VP Sbjct: 98 CSPGGNLSNLFTLAMKGDMNLSIVMTTCSSFSALGMMPLLLYVYSKGIYDGDLKDKVPYK 157
Query: 186 GIAMAKSILQIVLCPVMLGLGLNT 115 GI ++ L IVL P +G+ L + Sbjct: 158 GIMIS---LVIVLIPCTIGIVLKS 178
>sp|O08705|NTCP_MOUSE Sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a1 PE=2 SV=1 Length = 362
Score = 51.6 bits (122), Expect = 3e-06 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%) Frame = -1
Query: 522 IMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMA 343 IMLS+G + + +PK V++ +AQY PL L+ K+F++ + ++ Sbjct: 38 IMLSLGCTMEFSKIKAHFWKPKGVIIAIVAQYGIMPLSAFLLGKVFHLTSIEALAILICG 97
Query: 342 CVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSV--------VPVD 187 C G LS+ + GD+ + PLL ++ + VP Sbjct: 98 CSPGGNLSNLFTLAMKGDMNLSIVMTTCSSFTALGMMPLLLYIYSKGIYDGDLKDKVPYK 157
Query: 186 GIAMAKSILQIVLCPVMLGLGLNT 115 GI ++ L +VL P +G+ L + Sbjct: 158 GIMLS---LVMVLIPCAIGIFLKS 178
>sp|Q14973|NTCP_HUMAN Sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A1 PE=2 SV=1 Length = 349
Score = 49.7 bits (117), Expect = 1e-05 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Frame = -1
Query: 522 IMLSIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMA 343 IMLS+G + + L +PK + + +AQY PL ++ K+F + ++ Sbjct: 38 IMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCG 97
Query: 342 CVAGAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWLLIGSV--------VPVD 187 C G LS+ S GD+ + PLL ++ + VP Sbjct: 98 CSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYK 157
Query: 186 GIAMAKSILQIVLCPVMLGLGLNT 115 GI ++ L +VL P +G+ L + Sbjct: 158 GIVIS---LVLVLIPCTIGIVLKS 178
>sp|Q4JLT5|NTCP5_RAT Sodium/bile acid cotransporter 5 OS=Rattus norvegicus GN=Slc10a5 PE=2 SV=1 Length = 434
Score = 49.3 bits (116), Expect = 1e-05 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 8/171 (4%) Frame = -1
Query: 513 SIGVQLSIKDFEIVLKRPKPVLVGYIAQYAFKPLLGVLVAKLFNMPAAFYSGFILMACVA 334 + G ++ ++ + V KRP P+L+G + Q+ P G L++++ + A GF++ Sbjct: 155 AFGCKIELQVLQTVWKRPLPILLGAVTQFFLMPFCGFLLSQILGLSKAQAFGFVMTCTCP 214
Query: 333 GAQLSSYASYLSDGDVXXXXXXXXXXXXXXXIVTPLLTWL---LIGSV----VPVDGIAM 175 G + L +GDV I+ P+ ++L L+G VPV I Sbjct: 215 GGGGGYLFALLLEGDVTLAILMACTSTSLALIMMPVNSYLYSCLLGLAGVFHVPVLKIV- 273
Query: 174 AKSILQIVLCPVMLGLGL-NTYAKPAVDVIRPVMPVMAMVCTSMCIGSPLA 25 S L +L PV +G+ + + K AV + R V P + T M +G LA Sbjct: 274 --STLLFILTPVSIGIVIKHRMPKKAVCLERVVQP---LSLTLMLVGVYLA 319
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX39 |
Definition |
tr|A9NX39|A9NX39_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
191 |
Score (bit) |
256.0 |
E-value |
5.0e-67 |
Report |
|