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BP915732
Clone id YMU001_000076_B11
Library
Length 276
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCTCCCTCTCTTTGCGCAAGATTGGCTATGGCAATGGCGGTCCTTACCTCGTCCTGCTCG
TCGGAGTTCGCGGTTAGCCGCGTCTCACCTGCCTCCTCTGCTTCTGCGACCGTGCGATTG
GGCTCCATATCTCTCACCCTCAAACCCTACCCCCTCTCCTCAACGGCGCTTTCTGGTCAC
AGAGTCTCCATGGACGCGTCTGTGGCAGAGAAACCCAAAGCAGGTTCCAAGGAGCTGGCC
AACGACACTCTACTCACTCCCCGCTTCTACACCACT
■■Homology search results ■■ -
sp_hit_id Q945B7
Definition sp|Q945B7|CRD1_EUPES Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula
Align length 41
Score (bit) 36.6
E-value 0.04
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915732|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_B11.
         (276 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q945B7|CRD1_EUPES Magnesium-protoporphyrin IX monomethyl este...    37   0.040
sp|A5GKR3|ACSF_SYNPW Magnesium-protoporphyrin IX monomethyl este...    33   0.44 
sp|Q7U6Y8|ACSF_SYNPX Magnesium-protoporphyrin IX monomethyl este...    32   0.75 
sp|Q9M591|CRD1_ARATH Magnesium-protoporphyrin IX monomethyl este...    32   1.3  
sp|Q3AK18|ACSF_SYNSC Magnesium-protoporphyrin IX monomethyl este...    31   1.7  
sp|Q8YX57|ACSF1_ANASP Magnesium-protoporphyrin IX monomethyl est...    31   1.7  
sp|Q4WNK7|SEC13_ASPFU Protein transport protein sec13 OS=Aspergi...    31   1.7  
sp|A8G4Z1|ACSF_PROM2 Magnesium-protoporphyrin IX monomethyl este...    31   2.2  
sp|Q5EFU4|CRD1_HORVU Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q6SJV8|CRD1_GOSHI Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q9LD46|CRD1_CHLRE Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q0IAL0|ACSF_SYNS3 Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q5MZZ2|ACSF_SYNP6 Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q31LY2|ACSF_SYNE7 Magnesium-protoporphyrin IX monomethyl este...    30   2.9  
sp|Q8YRZ2|ACSF3_ANASP Magnesium-protoporphyrin IX monomethyl est...    30   2.9  
sp|A5GU20|ACSF_SYNR3 Magnesium-protoporphyrin IX monomethyl este...    30   3.7  
sp|Q8DJ05|ACSF1_THEEB Magnesium-protoporphyrin IX monomethyl est...    30   3.7  
sp|Q7V1M1|ACSF_PROMP Magnesium-protoporphyrin IX monomethyl este...    30   4.9  
sp|A2BWG6|ACSF_PROM5 Magnesium-protoporphyrin IX monomethyl este...    30   4.9  
sp|Q5H7N8|ZC3HF_CHICK Zinc finger CCCH domain-containing protein...    30   4.9  
sp|A2QHM1|SEC13_ASPNC Protein transport protein sec13 OS=Aspergi...    30   4.9  
sp|A1CGS0|SEC13_ASPCL Protein transport protein sec13 OS=Aspergi...    30   4.9  
sp|Q91X84|CRTC3_MOUSE CREB-regulated transcription coactivator 3...    30   4.9  
sp|Q8YVU4|ACSF2_ANASP Magnesium-protoporphyrin IX monomethyl est...    29   6.4  
sp|P72584|ACSF1_SYNY3 Magnesium-protoporphyrin IX monomethyl est...    29   6.4  
sp|Q3KP66|CA106_HUMAN Uncharacterized protein C1orf106 OS=Homo s...    29   6.4  
sp|Q9AR22|CTH1_CHLRE Magnesium-protoporphyrin IX monomethyl este...    29   8.3  
sp|P28107|WNT9_ALOVU Protein Wnt-9 (Fragment) OS=Alopias vulpinu...    29   8.4  
sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE...    29   8.4  
sp|Q8R565|CENPA_CRIGR Histone H3-like centromeric protein A OS=C...    29   8.4  

>sp|Q945B7|CRD1_EUPES Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase, chloroplastic OS=Euphorbia esula
           GN=CRD1 PE=3 SV=1
          Length = 405

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 157 SSTALSGHRVSMDASVAEKP-KAGSKELANDTLLTPRFYTT 276
           S+  +S    S   + A KP K G+K+  N+TLLTPRFYTT
Sbjct: 29  STIKMSATSQSNTTTTATKPSKKGNKKEINETLLTPRFYTT 69


>sp|A5GKR3|ACSF_SYNPW Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase OS=Synechococcus sp. (strain WH7803)
           GN=acsF PE=3 SV=1
          Length = 360

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
 Frame = +1

Query: 199 SVAEKPKAGS----KELANDTLLTPRFYTT 276
           +V + P AGS    K+ A DT+LTPRFYTT
Sbjct: 6   AVNDAPAAGSAVSVKDPAKDTILTPRFYTT 35


>sp|Q7U6Y8|ACSF_SYNPX Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase OS=Synechococcus sp. (strain WH8102)
           GN=acsF PE=3 SV=1
          Length = 356

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 199 SVAEKPKAGSKELANDTLLTPRFYTT 276
           +VAE     +K+   DT+LTPRFYTT
Sbjct: 6   AVAEANAVATKDPVKDTILTPRFYTT 31


>sp|Q9M591|CRD1_ARATH Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase, chloroplastic OS=Arabidopsis
           thaliana GN=CRD1 PE=2 SV=2
          Length = 409

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 12/51 (23%)
 Frame = +1

Query: 160 STALSGHRVS----MDASVAEKP--------KAGSKELANDTLLTPRFYTT 276
           S  LSG R S    M AS +  P        K G+K+   ++LLTPRFYTT
Sbjct: 23  SKFLSGRRFSTVIRMSASSSPPPPTTATSKSKKGTKKEIQESLLTPRFYTT 73


>sp|Q3AK18|ACSF_SYNSC Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase OS=Synechococcus sp. (strain CC9605)
           GN=acsF PE=3 SV=1
          Length = 356

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 199 SVAEKPKAGSKELANDTLLTPRFYTT 276
           +VAE      K+   DT+LTPRFYTT
Sbjct: 6   AVAEGSAVAIKDPVKDTILTPRFYTT 31


>sp|Q8YX57|ACSF1_ANASP Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase 1 OS=Anabaena sp. (strain PCC 7120)
           GN=acsF1 PE=3 SV=1
          Length = 351

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 214 PKAGSKELANDTLLTPRFYTT 276
           PK G K  + +T+LTPRFYTT
Sbjct: 6   PKPGIKTPSKETVLTPRFYTT 26


>sp|Q4WNK7|SEC13_ASPFU Protein transport protein sec13
           OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1
          Length = 306

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +2

Query: 119 WAPYLSP-----SNPTPSPQRRFLVTESP-WTRLWQRNPKQVPRSWPTTL 250
           WAP  SP     SNP P  QRRF+   S    ++W  NP+    +   TL
Sbjct: 162 WAPAASPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTL 211


>sp|A8G4Z1|ACSF_PROM2 Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase OS=Prochlorococcus marinus (strain
           MIT 9215) GN=acsF PE=3 SV=1
          Length = 390

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 229 KELANDTLLTPRFYTT 276
           KE+A DT+LTP FYTT
Sbjct: 18  KEIAKDTILTPNFYTT 33


>sp|Q5EFU4|CRD1_HORVU Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase, chloroplastic OS=Hordeum vulgare
           GN=CRD1 PE=1 SV=1
          Length = 417

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 214 PKAGSKELANDTLLTPRFYTT 276
           PK   K   N++LLTPRFYTT
Sbjct: 61  PKKRGKTEVNESLLTPRFYTT 81


>sp|Q6SJV8|CRD1_GOSHI Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum
           GN=CRD1 PE=2 SV=2
          Length = 405

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 157 SSTALSGHRVSMDASVAEKPKAGSKELANDTLLTPRFYTT 276
           ++  +S    S   + A+  K  +K    +TLLTPRFYTT
Sbjct: 30  TTVRMSSTSQSTTKAAAKGGKKAAKTAIKETLLTPRFYTT 69
tr_hit_id A9RZN5
Definition tr|A9RZN5|A9RZN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915732|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_B11.
         (276 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RZN5|A9RZN5_PHYPA Predicted protein OS=Physcomitrella paten...    36   0.85 
tr|A9SND8|A9SND8_PHYPA Magnesium-protoporphyrin IX monomethyl es...    35   1.5  
tr|Q6YU87|Q6YU87_ORYSJ Os02g0101900 protein OS=Oryza sativa subs...    35   1.5  
tr|A3A255|A3A255_ORYSJ Putative uncharacterized protein OS=Oryza...    35   1.5  
tr|A2WZR9|A2WZR9_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.5  
tr|B7K2W0|B7K2W0_SYNP8 Magnesium-protoporphyrin IX monomethyl es...    34   3.2  
tr|B4BTT7|B4BTT7_9CHRO Magnesium-protoporphyrin IX monomethyl es...    34   3.2  
tr|A7PUA2|A7PUA2_VITVI Chromosome chr7 scaffold_31, whole genome...    34   3.2  
tr|A9NUZ9|A9NUZ9_PICSI Putative uncharacterized protein OS=Picea...    33   5.5  
tr|Q1DNJ8|Q1DNJ8_COCIM Putative uncharacterized protein OS=Cocci...    33   5.5  
tr|A4CV05|A4CV05_SYNPV Magnesium-protoporphyrin IX monomethyl es...    33   7.2  
tr|Q00US7|Q00US7_OSTTA Copper target homolog 1 protein (ISS) OS=...    33   7.2  
tr|A4S7X3|A4S7X3_OSTLU Predicted protein OS=Ostreococcus lucimar...    33   7.2  
tr|A8LQ37|A8LQ37_DINSH Magnesium-protoporphyrin IX monomethyl es...    33   9.4  

>tr|A9RZN5|A9RZN5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_72648 PE=4 SV=1
          Length = 474

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = +2

Query: 95  PLLLRPCDWAPYLSPSNPTPSPQRRFLVTESPWTRLWQRNPKQVPRSWPTTLYSLPASTP 274
           P ++ P  W P+ + S P PSP    L     WT+ WQ  P  V  + P+   + P S P
Sbjct: 136 PSIVTP--WNPWSAMSPPPPSPPTPTLSPPMSWTQPWQTPPPPVDSTTPSFPGNKPPSPP 193


>tr|A9SND8|A9SND8_PHYPA Magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase, chloroplast OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_186735 PE=4 SV=1
          Length = 360

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = +1

Query: 181 RVSMDASVAEKPKAGS--KELANDTLLTPRFYTT 276
           RV+M A+ A  PK G   K+  ++TLLTPRFYTT
Sbjct: 52  RVTMAAAGAAAPKGGKQQKKEIDETLLTPRFYTT 85


>tr|Q6YU87|Q6YU87_ORYSJ Os02g0101900 protein OS=Oryza sativa subsp.
           japonica GN=B1370C05.22 PE=4 SV=1
          Length = 263

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
 Frame = +2

Query: 95  PLL---LRPCDW--APYLSPSNPT----PSPQRRFLVTESPWTR-------LWQRNPKQV 226
           PLL   LRP D+  +P  SPS P     PSP    ++   P +        LW+R P+++
Sbjct: 48  PLLSQPLRPMDFCPSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRL 107

Query: 227 PRSWPTTLYSLPAST 271
           P  W  T  SLP  T
Sbjct: 108 PPIWRPTPPSLPVDT 122


>tr|A3A255|A3A255_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004877 PE=4 SV=1
          Length = 355

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
 Frame = +2

Query: 95  PLL---LRPCDW--APYLSPSNPT----PSPQRRFLVTESPWTR-------LWQRNPKQV 226
           PLL   LRP D+  +P  SPS P     PSP    ++   P +        LW+R P+++
Sbjct: 140 PLLSQPLRPMDFCPSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRL 199

Query: 227 PRSWPTTLYSLPAST 271
           P  W  T  SLP  T
Sbjct: 200 PPIWRPTPPSLPVDT 214


>tr|A2WZR9|A2WZR9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05460 PE=4 SV=1
          Length = 355

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
 Frame = +2

Query: 95  PLL---LRPCDW--APYLSPSNPT----PSPQRRFLVTESPWTR-------LWQRNPKQV 226
           PLL   LRP D+  +P  SPS P     PSP    ++   P +        LW+R P+++
Sbjct: 140 PLLSQPLRPMDFCPSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRL 199

Query: 227 PRSWPTTLYSLPAST 271
           P  W  T  SLP  T
Sbjct: 200 PPIWRPTPPSLPVDT 214


>tr|B7K2W0|B7K2W0_SYNP8 Magnesium-protoporphyrin IX monomethyl ester
           aerobic oxidative cyclase OS=Synechococcus sp. (strain
           PCC 8801 / RF-1) GN=PCC8801_3705 PE=4 SV=1
          Length = 359

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 187 SMDASVAEKPKAGSKELANDTLLTPRFYTT 276
           ++D + +E  KAG K  + +TLLTPRFY T
Sbjct: 4   TLDKTASESVKAGIKAPSKETLLTPRFYIT 33


>tr|B4BTT7|B4BTT7_9CHRO Magnesium-protoporphyrin IX monomethyl ester
           aerobic oxidative cyclase OS=Cyanothece sp. PCC 8802
           GN=Cyan8802DRAFT_0497 PE=4 SV=1
          Length = 359

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 187 SMDASVAEKPKAGSKELANDTLLTPRFYTT 276
           ++D + +E  KAG K  + +TLLTPRFY T
Sbjct: 4   TLDKTASESVKAGIKAPSKETLLTPRFYIT 33


>tr|A7PUA2|A7PUA2_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023717001
           PE=4 SV=1
          Length = 240

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 122 APYLSPS-NPTPSPQRRFLVTESPWTRLWQRNPKQVPRSWPTTLYSLPASTP 274
           +P  SPS +P+PSP      + SP  + W  +P   P +WPT     P+S P
Sbjct: 144 SPITSPSPSPSPSPSPITSPSPSPSPKPWPSSPSPSPSAWPT-----PSSPP 190


>tr|A9NUZ9|A9NUZ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 431

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
 Frame = +1

Query: 193 DASVAEKPK----AGSKELANDTLLTPRFYTT 276
           + +V EKPK     G+KE   ++LLTPRFYTT
Sbjct: 64  EVAVKEKPKNNNKKGAKEGIKESLLTPRFYTT 95


>tr|Q1DNJ8|Q1DNJ8_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_08115 PE=4 SV=1
          Length = 472

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 129 ISHPQTLPPLLNGAFWSQSLHGRVCGRETQS 221
           +SHPQ L  ++    W + +H R+ G ET+S
Sbjct: 11  LSHPQELRSIIQWKVWHEPVHSRITGNETES 41