BP915734 |
Clone id |
YMU001_000076_C02 |
Library |
YMU01 |
Length |
640 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_C02. |
Accession |
BP915734 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATTCGCGGCCGCGAATGAGAGACCAAGGTTCCATAAAGAACTCTTCAACCTTCGAATCT TTTGTGTGTACATGATCCATGCTTTTGGATAACACTAATTTTTGCACTGGTTAAAATCAC TAGTTACTGCTCTCATCAAACATCTGAAAGATTGTAAAAAATTCTTGTGTATCCAAAATG GCCAGGGTGTCTCTAGCCTACTTGTTTTCATTTGCCTTGTTCTTACAAATATCACAAGGG CTTGCACCAAGTTGACAATTCTTGCTGTCAAACCTCTCACCAAAATAATCCAGCAACATC TCTCGCCTGCAACGTTTCTTTTCCGCACAGTAACCCTGCATCTTGCGGGCCTGCTCCATT CCCCATTTGAATCGCACACTACTAGTTCCCTGTCCCATGCGAAGCATACACACAATGCGG CTAAAATCCCTCTTTCTGTAGAGAATCATGCAAGTTGATGGCAATCCGTCTCTTCCAGCT CTACCAGACTCCTGATAGTAGCTCTCAACAGCCTTGGACATGGAGTTGTGGATCACAAAT CGCACAGCTGCCTTGTCAATACCCATTCCAAATGCTATCGTCGCACACACCACTTGTACT TCACCACTCTGCCATTTCCTCTGCACAAGCATCCTCTTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O18017 |
Definition |
sp|O18017|BLM_CAEEL Bloom syndrome protein homolog OS=Caenorhabditis elegans |
Align length |
140 |
Score (bit) |
144.0 |
E-value |
5.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M9M2 |
Definition |
tr|Q9M9M2|Q9M9M2_ARATH Putative DNA helicase OS=Arabidopsis thaliana |
Align length |
139 |
Score (bit) |
202.0 |
E-value |
2.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915734|Adiantum capillus-veneris mRNA, clone: YMU001_000076_C02. (623 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M9M2|Q9M9M2_ARATH Putative DNA helicase OS=Arabidopsis thal... 202 2e-50 tr|Q9FT74|Q9FT74_ARATH DNA Helicase OS=Arabidopsis thaliana GN=r... 202 2e-50 tr|A9PK87|A9PK87_POPJC Putative uncharacterized protein OS=Popul... 195 2e-48 tr|A7PRU5|A7PRU5_VITVI Chromosome chr14 scaffold_27, whole genom... 190 5e-47 tr|Q2QZT4|Q2QZT4_ORYSJ ATP-dependent DNA helicase, RecQ family p... 187 3e-46 tr|A2ZGS0|A2ZGS0_ORYSI Putative uncharacterized protein OS=Oryza... 187 3e-46 tr|A5C5H6|A5C5H6_VITVI Putative uncharacterized protein OS=Vitis... 153 9e-36 tr|A8QC96|A8QC96_BRUMA Bloom's syndrome protein homolog, putativ... 143 9e-33 tr|A8Y0R9|A8Y0R9_CAEBR CBR-HIM-6 protein OS=Caenorhabditis brigg... 142 2e-32 tr|Q6FLV3|Q6FLV3_CANGA Similar to uniprot|P35187 Saccharomyces c... 133 7e-30 tr|Q6CR11|Q6CR11_KLULA KLLA0D12694p OS=Kluyveromyces lactis GN=K... 133 1e-29 tr|A4RQ28|A4RQ28_MAGGR Putative uncharacterized protein OS=Magna... 132 2e-29 tr|Q6FSG2|Q6FSG2_CANGA Similar to uniprot|P35187 Saccharomyces c... 131 4e-29 tr|Q23ED9|Q23ED9_TETTH ATP-dependent DNA helicase, RecQ family p... 130 8e-29 tr|Q9P8U6|Q9P8U6_NEUCR QDE3 protein OS=Neurospora crassa GN=qde-... 130 8e-29 tr|Q7SDG4|Q7SDG4_NEUCR Putative uncharacterized protein OS=Neuro... 130 8e-29 tr|Q755I2|Q755I2_ASHGO AFL159Wp OS=Ashbya gossypii GN=AFL159W PE... 129 1e-28 tr|Q8SRI7|Q8SRI7_ENCCU ATP-DEPENDENT DNA HELICASE OS=Encephalito... 129 2e-28 tr|B3LM77|B3LM77_YEAS1 ATP-dependent helicase SGS1 OS=Saccharomy... 128 3e-28 tr|A6ZMQ1|A6ZMQ1_YEAS7 Nucleolar DNA helicase of the RecQ family... 128 3e-28 tr|A1CEH8|A1CEH8_ASPCL RecQ family helicase MusN OS=Aspergillus ... 127 5e-28 tr|B7QHT3|B7QHT3_IXOSC DNA helicase recq1, putative (Fragment) O... 126 9e-28 tr|A8WK63|A8WK63_CAEBR Putative uncharacterized protein OS=Caeno... 126 9e-28 tr|A5DNI6|A5DNI6_PICGU Putative uncharacterized protein OS=Pichi... 126 9e-28 tr|Q6BZP6|Q6BZP6_YARLI YALI0F31977p OS=Yarrowia lipolytica GN=YA... 126 1e-27 tr|B6K5C8|B6K5C8_SCHJP ATP-dependent DNA helicase hus2/rqh1 OS=S... 126 1e-27 tr|B4HHX9|B4HHX9_DROSE GM26077 OS=Drosophila sechellia GN=GM2607... 125 3e-27 tr|B3RJM9|B3RJM9_TRIAD Putative uncharacterized protein OS=Trich... 125 3e-27 tr|B3P4F9|B3P4F9_DROER GG17198 OS=Drosophila erecta GN=GG17198 P... 125 3e-27 tr|B3M115|B3M115_DROAN GF16620 OS=Drosophila ananassae GN=GF1662... 125 3e-27
>tr|Q9M9M2|Q9M9M2_ARATH Putative DNA helicase OS=Arabidopsis thaliana GN=F10A16.2 PE=4 SV=1 Length = 624
Score = 202 bits (513), Expect = 2e-50 Identities = 95/139 (68%), Positives = 114/139 (82%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQRKWQ+GEV++VCATIAFGMGIDKA VRFVIHN++SKAVESYYQESGRAGRDGL Sbjct: 484 QRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQ 543
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 + C+ LY+K+DFSR+VCMLR GQG + RFK M QA+KMQ YC K CRR+MLL+YFG Sbjct: 544 AQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFG 603
Query: 261 ERFDSKNCQLGASPCDICK 205 E FD C+ +PCD C+ Sbjct: 604 ESFDRMICKSSLNPCDNCE 622
>tr|Q9FT74|Q9FT74_ARATH DNA Helicase OS=Arabidopsis thaliana GN=recQl1 PE=2 SV=1 Length = 606
Score = 202 bits (513), Expect = 2e-50 Identities = 95/139 (68%), Positives = 114/139 (82%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQRKWQ+GEV++VCATIAFGMGIDKA VRFVIHN++SKAVESYYQESGRAGRDGL Sbjct: 466 QRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQ 525
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 + C+ LY+K+DFSR+VCMLR GQG + RFK M QA+KMQ YC K CRR+MLL+YFG Sbjct: 526 AQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFG 585
Query: 261 ERFDSKNCQLGASPCDICK 205 E FD C+ +PCD C+ Sbjct: 586 ESFDRMICKSSLNPCDNCE 604
>tr|A9PK87|A9PK87_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 617
Score = 195 bits (495), Expect = 2e-48 Identities = 89/138 (64%), Positives = 110/138 (79%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQRKW +GEV +VCATIAFGMGIDK VRFVIHN++SK++ESYYQESGRAGRD P Sbjct: 475 QRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHP 534
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 +TC+ LY+K+DFSR+VCMLR GQG FK M QA+KM+ YC K CRR++LL++FG Sbjct: 535 ATCIALYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKAECRRQVLLEHFG 594
Query: 261 ERFDSKNCQLGASPCDIC 208 E FD K C+ G+ PCD C Sbjct: 595 ESFDQKACKFGSHPCDNC 612
>tr|A7PRU5|A7PRU5_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022637001 PE=4 SV=1 Length = 432
Score = 190 bits (483), Expect = 5e-47 Identities = 87/138 (63%), Positives = 108/138 (78%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQ+KW +G+V ++CATIAFGMGI+K VRFVIHN+MSK++E+YYQESGRAGRD LP Sbjct: 292 QRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLP 351
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 + CM LY+K+DFSR+VCMLR G G S FK M QARKMQ YC K CRR+ LL++FG Sbjct: 352 AVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKMQQYCELKTECRRQTLLEHFG 411
Query: 261 ERFDSKNCQLGASPCDIC 208 E D K C+ G +PCD C Sbjct: 412 ESLDRKACKNGCNPCDNC 429
>tr|Q2QZT4|Q2QZT4_ORYSJ ATP-dependent DNA helicase, RecQ family protein, expressed OS=Oryza sativa subsp. japonica GN=Os11g0672700 PE=4 SV=1 Length = 588
Score = 187 bits (476), Expect = 3e-46 Identities = 88/138 (63%), Positives = 106/138 (76%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R VQ KW SGEV+V+CATIAFGMGIDK VRFVIHN+MSK++ESYYQESGRAGRD LP Sbjct: 446 QRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNLP 505
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 + C++LY+K+D RIVCMLR S FK MEQA+KMQ YC K CRR+ LL +FG Sbjct: 506 AHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAMEQAKKMQTYCELKTECRRQTLLGHFG 565
Query: 261 ERFDSKNCQLGASPCDIC 208 E++D + C+ G SPCD C Sbjct: 566 EQYDRQRCKHGCSPCDNC 583
>tr|A2ZGS0|A2ZGS0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36975 PE=4 SV=1 Length = 588
Score = 187 bits (476), Expect = 3e-46 Identities = 88/138 (63%), Positives = 106/138 (76%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R VQ KW SGEV+V+CATIAFGMGIDK VRFVIHN+MSK++ESYYQESGRAGRD LP Sbjct: 446 QRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNLP 505
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 + C++LY+K+D RIVCMLR S FK MEQA+KMQ YC K CRR+ LL +FG Sbjct: 506 AHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAMEQAKKMQTYCELKTECRRQTLLGHFG 565
Query: 261 ERFDSKNCQLGASPCDIC 208 E++D + C+ G SPCD C Sbjct: 566 EQYDRQRCKHGCSPCDNC 583
>tr|A5C5H6|A5C5H6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005845 PE=4 SV=1 Length = 1640
Score = 153 bits (386), Expect = 9e-36 Identities = 71/107 (66%), Positives = 87/107 (81%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQ+KW +G+V ++CATIAFGMGI+K VRFVIHN+MSK++E+YYQESGRAGRD LP Sbjct: 579 QRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLP 638
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEK 301 + CM LY+K+DFSR+VCMLR G G S FK M QARKMQ YC K Sbjct: 639 AVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKMQQYCELK 685
>tr|A8QC96|A8QC96_BRUMA Bloom's syndrome protein homolog, putative OS=Brugia malayi GN=Bm1_49360 PE=4 SV=1 Length = 1054
Score = 143 bits (360), Expect = 9e-33 Identities = 71/138 (51%), Positives = 92/138 (66%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 KR+ VQ KW S +V V+CATIAFGMGIDK VRFVIH SM K++E+YYQE+GRAGRDGL Sbjct: 557 KRLEVQTKWISNQVNVICATIAFGMGIDKPDVRFVIHFSMPKSIEAYYQETGRAGRDGLN 616
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 S C ILY D RI M+ T VR + ++ YC CRR++L+++FG Sbjct: 617 SYCAILYSYNDSVRIRKMIEGENNTQGVR-TMHLNSVLQIVAYCENVSICRRKLLVEHFG 675
Query: 261 ERFDSKNCQLGASPCDIC 208 E +D++ C+ SPCD+C Sbjct: 676 EVYDAEACRTSNSPCDVC 693
>tr|A8Y0R9|A8Y0R9_CAEBR CBR-HIM-6 protein OS=Caenorhabditis briggsae GN=Cbr-him-6 PE=4 SV=2 Length = 1005
Score = 142 bits (357), Expect = 2e-32 Identities = 65/140 (46%), Positives = 95/140 (67%) Frame = -3
Query: 618 RMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLPS 439 R+ VQ+ W + + V+CATIAFGMGIDK VRFVIH S+ K++E YYQE+GRAGRDG+PS Sbjct: 525 RVSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPS 584
Query: 438 TCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFGE 259 C++LY D R+ M+ G T+ VR + ++ YC CRR+ML+++FGE Sbjct: 585 YCLMLYSYHDSIRLRRMIEEGNTTTGVR-SMHLNNVLQVVAYCENVSVCRRKMLVEHFGE 643
Query: 258 RFDSKNCQLGASPCDICKNK 199 +D ++C+ +PCD+C+ + Sbjct: 644 VYDEQSCRNSKTPCDVCERQ 663
>tr|Q6FLV3|Q6FLV3_CANGA Similar to uniprot|P35187 Saccharomyces cerevisiae YMR190c SGS1 DNA helicase OS=Candida glabrata GN=CAGL0L00407g PE=4 SV=1 Length = 1371
Score = 133 bits (335), Expect = 7e-30 Identities = 63/150 (42%), Positives = 94/150 (62%) Frame = -3
Query: 621 KRMLVQRKWQSGEVQVVCATIAFGMGIDKAAVRFVIHNSMSKAVESYYQESGRAGRDGLP 442 +R+ VQR+WQ+ +QV+CAT+AFGMGIDKA VRFV H ++ + +E YYQE+GRAGRDG Sbjct: 887 ERLQVQREWQNDNLQVICATVAFGMGIDKADVRFVFHFTVPRTLEGYYQETGRAGRDGNY 946
Query: 441 STCMILYRKRDFSRIVCMLRMGQGTSSVRFKWGMEQARKMQGYCAEKKRCRREMLLDYFG 262 S C+ Y RD + M++ + + + +++ +++ YC CRR+++L YF Sbjct: 947 SYCITYYSFRDVRTMQTMIQKDKNLDGINKQKHLDKLQQVTAYCENDTDCRRKLVLSYFS 1006
Query: 261 ERFDSKNCQLGASPCDICKNKANENK*ARD 172 E FD NC CD C+N ++ K RD Sbjct: 1007 EEFDPINCN---KNCDNCRNSSSVTKEERD 1033
|