BP915735
Clone id YMU001_000076_C03
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACATTTACAAGGGGATGCTTTATGATCATGGTATTGATAAGGGGCAGGCATCTGCTTCA
AGCATCGCAGAGCTCCGCTTAGGTGGAAGAAATCCTGCACCTTCAAGTTCAGCAACTATA
GATCTTGCTGGAAACCTCTATGGAACCTCAGAGAGTGTATTTCTTGGAGGTAATAATGCC
ACTCATTAAGAGGAAAGGCCCATGCAGCTGTGAAGGACAAGTGGCCTCTTTGTAGAGAAT
TGAGTCCATTACCCTTGCTGTGAAAGGGATGGTTTGGCAACGATCGAAGCACAAAAAGTT
GTTTTTTCCCAAGCTAACAATCGTCGAGAATGTGGGTTTCGCTGTGCAACAATTGTGAGT
GCATTGGCGATCTGTTTGCCTCACTTCTTGAATGAGGATTGTATGTAATATGGTCTTGTG
AGCCACCTTTCTAGCCCAGCACATGT
■■Homology search results ■■ -
sp_hit_id Q8JFY2
Definition sp|Q8JFY2|BM8B_BOMMX Prokineticin Bm8-b OS=Bombina maxima
Align length 75
Score (bit) 32.0
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915735|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C03.
(446 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8JFY2|BM8B_BOMMX Prokineticin Bm8-b OS=Bombina maxima PE=2 SV=1 32 1.2
sp|Q8WKK9|MATK_MARSC Maturase K OS=Marathrum schiedeanum GN=matK... 29 7.8
sp|Q8JFX9|BM8E_BOMMX Prokineticin Bm8-e OS=Bombina maxima PE=2 SV=1 29 7.8

>sp|Q8JFY2|BM8B_BOMMX Prokineticin Bm8-b OS=Bombina maxima PE=2 SV=1
Length = 96

Score = 32.0 bits (71), Expect = 1.2
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Frame = -3

Query: 441 CWARKVAHKTIL---HTILIQEVRQTDRQCTHNCCTAKPTFST----IVSLGKNNFLCFD 283
C+A+ V ++ H +I VR D QC C A FS V LG N C
Sbjct: 3 CFAQIVVLLLVIAFSHGAVITGVRDRDAQCGSGTCCAASAFSRNIRFCVPLGNNGEECHP 62

Query: 282 RCQTIPFTARVMDSI 238
+P+ + + S+
Sbjct: 63 ASHKVPYNGKRLSSL 77


>sp|Q8WKK9|MATK_MARSC Maturase K OS=Marathrum schiedeanum GN=matK
PE=3 SV=1
Length = 508

Score = 29.3 bits (64), Expect = 7.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2

Query: 190 LNEWHYYLQEIHSLRFHRGFQQDL*LLNLKVQDFFHLSGALRCLKQMPA 44
+N+W YY + F FQ D +N + FH G L LK P+
Sbjct: 295 MNKWKYYFVTLFQNHFDVWFQTDKIHINPLYKHSFHCVGYLLSLKWNPS 343


>sp|Q8JFX9|BM8E_BOMMX Prokineticin Bm8-e OS=Bombina maxima PE=2 SV=1
Length = 96

Score = 29.3 bits (64), Expect = 7.8
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Frame = -3

Query: 441 CWARKVAHKTIL---HTILIQEVRQTDRQCTHNCCTAKPTFST----IVSLGKNNFLCFD 283
C+A+ V ++ H +I V D QC C A FS V LG N C
Sbjct: 3 CFAQIVVLLLVIAFSHGAVITGVCDRDAQCGSGTCCAASAFSRNIRFCVPLGNNGEECHP 62

Query: 282 RCQTIPFTARVMDSI--LYKEATCP 214
+P+ + + S+ TCP
Sbjct: 63 ASHKVPYNGKRLSSLCPCNTGLTCP 87


tr_hit_id A9RNV1
Definition tr|A9RNV1|A9RNV1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 67
Score (bit) 43.1
E-value 0.007
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915735|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C03.
(446 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RNV1|A9RNV1_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007
tr|Q58GF3|Q58GF3_PHYPA Putative zinc finger protein OS=Physcomit... 43 0.009
tr|A9TYI6|A9TYI6_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.009
tr|B0WK41|B0WK41_CULQU Poly(A) polymerase cid OS=Culex quinquefa... 35 2.4
tr|Q4J2X3|Q4J2X3_AZOVI Catalytic LigB subunit of aromatic ring-o... 34 4.1
tr|Q941Y5|Q941Y5_ORYSJ cDNA clone:J033093N15, full insert sequen... 33 7.0
tr|B8A9L5|B8A9L5_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.0
tr|A3A1M3|A3A1M3_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.0
tr|A5GNU1|A5GNU1_SYNPW Predicted molecular chaperone distantly r... 33 9.1

>tr|A9RNV1|A9RNV1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_204223 PE=4 SV=1
Length = 291

Score = 43.1 bits (100), Expect = 0.007
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKG-QASASSIAELRLGG------RNPAPSSSATIDLAGNLYGTSESV 159
HI+KG+LYD G+D QA S+ +EL+LGG R+ PSSS +D +G G +
Sbjct: 221 HIFKGLLYDQGLDLAQQAVTSNPSELQLGGGGAGGVRSNLPSSSPLLDPSGMYAG---NP 277

Query: 160 FLGGNNA 180
LGG ++
Sbjct: 278 LLGGEDS 284


>tr|Q58GF3|Q58GF3_PHYPA Putative zinc finger protein
OS=Physcomitrella patens GN=SHI PE=4 SV=1
Length = 289

Score = 42.7 bits (99), Expect = 0.009
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKG-QASASSIAELRLGG------RNPAPSSSATIDLAGNLYGTSESV 159
HI+KG+LYD G+D A S+ +EL LGG R+ PSSS +D +G +YG ++
Sbjct: 218 HIFKGLLYDQGLDLAPPAVTSNPSELHLGGGGAGGVRSNLPSSSPLLDPSG-MYGPGNAL 276

Query: 160 FLGGNNA 180
LGG ++
Sbjct: 277 -LGGEDS 282


>tr|A9TYI6|A9TYI6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_226674 PE=4 SV=1
Length = 289

Score = 42.7 bits (99), Expect = 0.009
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKG-QASASSIAELRLGG------RNPAPSSSATIDLAGNLYGTSESV 159
HI+KG+LYD G+D A S+ +EL LGG R+ PSSS +D +G +YG ++
Sbjct: 218 HIFKGLLYDQGLDLAPPAVTSNPSELHLGGGGAGGVRSNLPSSSPLLDPSG-MYGPGNAL 276

Query: 160 FLGGNNA 180
LGG ++
Sbjct: 277 -LGGEDS 282


>tr|B0WK41|B0WK41_CULQU Poly(A) polymerase cid OS=Culex
quinquefasciatus GN=CpipJ_CPIJ007096 PE=4 SV=1
Length = 1185

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1

Query: 10 KGMLYDHGIDKGQASASSIAELRLGGRNPAP-SSSATIDLAGNLYGTSESVFLGGNNATH 186
+ ++Y G D+GQ +ASS E P+P S S ID A + T+ S G ++++
Sbjct: 446 RNLVYIRGYDRGQGAASSSQESTSRSPTPSPQSESPAIDTASEVVKTTSSNIAGSSSSSV 505

Query: 187 *EER 198
+E+
Sbjct: 506 QDEK 509


>tr|Q4J2X3|Q4J2X3_AZOVI Catalytic LigB subunit of aromatic
ring-opening dioxygenase OS=Azotobacter vinelandii DJ
GN=AvinDRAFT_6668 PE=4 SV=1
Length = 312

Score = 33.9 bits (76), Expect = 4.1
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +1

Query: 13 GMLYDHGIDKGQASASSIAELRLGGRNPAPSSSATID----LAGNLYGTSES 156
G+ ++ + +A IAE + GRNP P + A AG +YGT+ES
Sbjct: 176 GLSHEPPVPLLSGAAEEIAEFLIAGRNPTPEARAARQARTIAAGKIYGTAES 227


>tr|Q941Y5|Q941Y5_ORYSJ cDNA clone:J033093N15, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0431G06.36 PE=2 SV=1
Length = 340

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 12/41 (29%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKGQASAS------------SIAELRLGG 87
H++KG LYD G+D G+ A+ +I+EL LGG
Sbjct: 256 HVFKGFLYDQGVDDGRGLAATSNDDSTAGGVPNISELHLGG 296


>tr|B8A9L5|B8A9L5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05244 PE=4 SV=1
Length = 507

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 12/41 (29%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKGQASAS------------SIAELRLGG 87
H++KG LYD G+D G+ A+ +I+EL LGG
Sbjct: 423 HVFKGFLYDQGVDDGRGLAATSNDDSTAGGVPNISELHLGG 463


>tr|A3A1M3|A3A1M3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_004695 PE=4 SV=1
Length = 490

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 12/41 (29%)
Frame = +1

Query: 1 HIYKGMLYDHGIDKGQASAS------------SIAELRLGG 87
H++KG LYD G+D G+ A+ +I+EL LGG
Sbjct: 361 HVFKGFLYDQGVDDGRGLAATSNDDSTAGGVPNISELHLGG 401


>tr|A5GNU1|A5GNU1_SYNPW Predicted molecular chaperone distantly
related to HSP70-fold metalloprotease OS=Synechococcus
sp. (strain WH7803) GN=SynWH7803_2180 PE=4 SV=1
Length = 387

Score = 32.7 bits (73), Expect = 9.1
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1

Query: 434 LERWLTRPYYIQSSFKK*GKQIANALTI---VAQRNPHSRRLLAWEKTTFCASIVAK 273
LERWL PY++ S K G+++ + + Q PHS T F A++VA+
Sbjct: 238 LERWLQEPYFLSSPPKSTGREVFGQDDLNRRLQQLAPHSAANQLATLTAFSAAVVAQ 294