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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915736
Clone id YMU001_000076_C04
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACGGGGACTAGCAGGTGAAGTCCTGTTGCGACTCACTTACACTGCCTATGTTGATGATGA
AGAGGAAGGCATCAAAAAGGATGCACCACTTCCATCTCCAAGAAATCTGGTATCTGTGGC
CGAGGGAACTACGGACGCTCTGCCTTTGGTAAAAGAAGTAATTGACAAAGTTGTAGAGAC
AGTTCGAGTAGAGAACCCTGTAGTGAGCCAGGCTGTTACGTCATTGTTGAATGTGGAAGC
TAGTAATGGTGAGCCTAGCAACAACAATGAGCTGTTAGAGCCAGAGGACTTGGAGATAGA
GAACAATAATGGTGTAACCACAGAAGCTGCTGGGAAAGGGAAAATTAAAGAGGTTGCACC
AGCCATAGCAGAAGATGCGGAGAATTTTAGTGGAAGGACTGTGCTACTATGGCTTGGAGT
GGTAACCCTTCTGTCTATTTTGATGGCTATTAGCCATTTGTCAAGTTTTATGAATCCTTA
AACCTGTGTATATTGTAGAGTGTACATTACAGCAATGG
■■Homology search results ■■ -
sp_hit_id Q9P7U7
Definition sp|Q9P7U7|YP13_SCHPO Uncharacterized protein P4G3.03 OS=Schizosaccharomyces pombe
Align length 26
Score (bit) 30.0
E-value 6.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915736|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C04.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9P7U7|YP13_SCHPO Uncharacterized protein P4G3.03 OS=Schizosa...    30   6.8  

>sp|Q9P7U7|YP13_SCHPO Uncharacterized protein P4G3.03
           OS=Schizosaccharomyces pombe GN=SPBP4G3.03 PE=2 SV=1
          Length = 241

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 103 KSGICGRGNYGRSAFGKRSN*QSCRD 180
           + G CGR  +GR  FGKRS    CR+
Sbjct: 212 RGGFCGR--HGRGGFGKRSGLHGCRE 235
tr_hit_id A7PNG5
Definition tr|A7PNG5|A7PNG5_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera
Align length 22
Score (bit) 38.1
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915736|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C04.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PNG5|A7PNG5_VITVI Chromosome chr1 scaffold_22, whole genome...    38   0.26 
tr|Q6K9U1|Q6K9U1_ORYSJ C2 domain-containing protein-like (Putati...    37   0.45 
tr|Q0DW69|Q0DW69_ORYSJ Os02g0829200 protein (Fragment) OS=Oryza ...    37   0.45 
tr|B8AF78|B8AF78_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.45 
tr|B7EI07|B7EI07_ORYSJ cDNA clone:J023058O06, full insert sequen...    37   0.45 
tr|Q9LT26|Q9LT26_ARATH Genomic DNA, chromosome 3, P1 clone: MPN9...    37   0.77 
tr|B6ETT7|B6ETT7_ARATH NTMC2T5.2 protein OS=Arabidopsis thaliana...    37   0.77 
tr|Q9SX44|Q9SX44_ARATH F14I3.13 protein OS=Arabidopsis thaliana ...    35   1.7  
tr|Q8L626|Q8L626_ARATH Putative uncharacterized protein At1g5026...    35   1.7  

>tr|A7PNG5|A7PNG5_VITVI Chromosome chr1 scaffold_22, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021243001
           PE=4 SV=1
          Length = 661

 Score = 38.1 bits (87), Expect = 0.26
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +2

Query: 2   RGLAGEVLLRLTYTAYVDDEEE 67
           RG +GE+LLRLTY AYV+DEE+
Sbjct: 514 RGSSGEILLRLTYKAYVEDEED 535


>tr|Q6K9U1|Q6K9U1_ORYSJ C2 domain-containing protein-like (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OJ1124_D06.5 PE=4 SV=1
          Length = 658

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 18/24 (75%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = +2

Query: 14  GEVLLRLTYTAYVDDEE-EGIKKD 82
           GEVLLRLTY AYV+DEE EG+K +
Sbjct: 519 GEVLLRLTYKAYVEDEEDEGVKNE 542


>tr|Q0DW69|Q0DW69_ORYSJ Os02g0829200 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os02g0829200 PE=4 SV=1
          Length = 492

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 18/24 (75%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = +2

Query: 14  GEVLLRLTYTAYVDDEE-EGIKKD 82
           GEVLLRLTY AYV+DEE EG+K +
Sbjct: 353 GEVLLRLTYKAYVEDEEDEGVKNE 376


>tr|B8AF78|B8AF78_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09547 PE=4 SV=1
          Length = 478

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 18/24 (75%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = +2

Query: 14  GEVLLRLTYTAYVDDEE-EGIKKD 82
           GEVLLRLTY AYV+DEE EG+K +
Sbjct: 339 GEVLLRLTYKAYVEDEEDEGVKNE 362


>tr|B7EI07|B7EI07_ORYSJ cDNA clone:J023058O06, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 399

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 18/24 (75%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = +2

Query: 14  GEVLLRLTYTAYVDDEE-EGIKKD 82
           GEVLLRLTY AYV+DEE EG+K +
Sbjct: 260 GEVLLRLTYKAYVEDEEDEGVKNE 283


>tr|Q9LT26|Q9LT26_ARATH Genomic DNA, chromosome 3, P1 clone: MPN9
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 683

 Score = 36.6 bits (83), Expect = 0.77
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   RGLAGEVLLRLTYTAYVDDEEE 67
           +G  GE+LLRLTY AYV+DEE+
Sbjct: 500 KGSTGEILLRLTYKAYVEDEED 521


>tr|B6ETT7|B6ETT7_ARATH NTMC2T5.2 protein OS=Arabidopsis thaliana
           GN=ntmc2T5.2 PE=2 SV=2
          Length = 693

 Score = 36.6 bits (83), Expect = 0.77
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   RGLAGEVLLRLTYTAYVDDEEE 67
           +G  GE+LLRLTY AYV+DEE+
Sbjct: 527 KGSTGEILLRLTYKAYVEDEED 548


>tr|Q9SX44|Q9SX44_ARATH F14I3.13 protein OS=Arabidopsis thaliana
           GN=F14I3.13 PE=4 SV=1
          Length = 737

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +2

Query: 2   RGLAGEVLLRLTYTAYVDDEEE 67
           +G AGE+LLRLTY +YV++EE+
Sbjct: 507 KGSAGEILLRLTYKSYVEEEED 528


>tr|Q8L626|Q8L626_ARATH Putative uncharacterized protein At1g50260
           (At1g50260) OS=Arabidopsis thaliana GN=At1g50260 PE=2
           SV=1
          Length = 675

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +2

Query: 2   RGLAGEVLLRLTYTAYVDDEEE 67
           +G AGE+LLRLTY +YV++EE+
Sbjct: 515 KGSAGEILLRLTYKSYVEEEED 536