| BP915741 |
| Clone id |
YMU001_000076_C09 |
| Library |
YMU01 |
| Length |
529 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_C09. |
| Accession |
BP915741 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CTGGTGCCTCAGGAGGAGCAATCCGAAAGCCTTGACTGAGAATACCGACATAATTTGTTG
TTCTTGACCCATGCCATAACAACATGCGGTTTCCAAGAGGCTTCTTCGATACAAAAGCAT
CCTCCTCTCCTTCTCTCAAAACAGTAAACACATCCTCCAGTTCTAAGTTCCATTCCTTGT
GTGTTGGAGCATGAGTATTTTCCAAATACTTTTAAACGAAGACCAAAGTCATCACTGTCA
TGTGGCACAGGCACAATACCACAGCACAGCTTCGGATAGTTTATGTCCAGAGGGTCCTCG
TCATCATCGCCCCCTGTAGATCCGATGAGCTTTGCAGCCACTTCGATGTCTCTCAAAGCT
TCCAACATATCAATCTTTGACTTGAGGCAGTCCTCATCCAATATAATGCGGGGATGAACA
TGAGGTACTAAAGTGAAAAATCTATTACTAGCATCTATGAGAAGCCTGTCTCTTTTGTCG
AGATCATCATTTCCAAGAACATTCTGAACCTCAGTCAACACCTGGAAGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q7EYV7 |
| Definition |
sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica |
| Align length |
71 |
| Score (bit) |
105.0 |
| E-value |
8.0e-47 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915741|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C09.
(529 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sa... 105 8e-47
sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidop... 105 9e-45
sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays... 101 5e-43
sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetul... 97 4e-33
sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taur... 97 8e-33
sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus nor... 95 1e-32
sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sap... 95 1e-32
sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musc... 95 2e-32
sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus g... 92 1e-31
sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musc... 96 1e-30
sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sap... 92 2e-29
sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase (Fragment) OS... 92 3e-29
sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidop... 85 9e-28
sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila ... 94 2e-27
sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays... 84 2e-26
sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza ... 87 2e-26
sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza ... 86 2e-26
sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga ... 91 3e-25
sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase (Fragment) OS... 92 5e-25
sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenor... 75 1e-21
sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS... 53 1e-12
sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidop... 49 1e-11
sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sa... 55 2e-11
sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sap... 50 4e-10
sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine ... 53 1e-06
sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenor... 38 0.026
sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sap... 34 0.50
sp|O43561|LAT_HUMAN Linker for activation of T-cells family memb... 33 1.1
sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenor... 31 4.2
sp|Q1LK07|PDXH_RALME Pyridoxine/pyridoxamine 5'-phosphate oxidas... 30 7.2
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza
sativa subsp. japonica GN=PARP1 PE=2 SV=1
Length = 977
Score = 105 bits (261), Expect(2) = 8e-47
Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL NTHAPTHKEW+LELE+VF++ R+GE + K L N+MLLWHGSR TNYVGILS
Sbjct: 780 KYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILS 839
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 840 QGLRIAPPEAP 850
Score = 102 bits (253), Expect(2) = 8e-47
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXD---ASNRFFTLVPHVHPRIILDEDCLKSKIDMLEA 357
F+ LTE+QN+LGN ASNRFFTL+P +HP II DED L K+ MLEA
Sbjct: 674 FEALTEIQNLLGNTNNQELAVRESLIVAASNRFFTLIPSIHPHIIQDEDDLMVKVKMLEA 733
Query: 356 LRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
L+DIE+A+KL+G D+++ LD Y KL C I P+PHD +D+ L
Sbjct: 734 LQDIEIASKLVGF--DSDNDESLDDKYKKLRCAITPLPHDCEDYKL 777
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis
thaliana GN=PARP1 PE=1 SV=2
Length = 983
Score = 105 bits (263), Expect(2) = 9e-45
Identities = 49/71 (69%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL THAPTH EW+LELE+VF + REGE D + ++ LGN+MLLWHGSR TN+VGIL+
Sbjct: 786 KYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILN 845
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 846 QGLRIAPPEAP 856
Score = 94.4 bits (233), Expect(2) = 9e-45
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = -3
Query: 527 FQVLTEVQNVL--GNXXXXXXXXXXXDASNRFFTLVPHVHPRIILDEDCLKSKIDMLEAL 354
F+ LTE+Q +L + DASNRFFT++P +HP II DED KSK+ MLEAL
Sbjct: 681 FEALTEIQRLLTESDPQPTMKESLLVDASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEAL 740
Query: 353 RDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
+DIE+A++++G D + LD Y KL C I P+PHDS+D+ L
Sbjct: 741 QDIEIASRIVGF--DVDSTESLDDKYKKLHCDISPLPHDSEDYRL 783
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays
GN=PARP1 PE=2 SV=1
Length = 980
Score = 101 bits (251), Expect(2) = 5e-43
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
+YL NTHAPTHK+W+LELE+VF++ R+GE + + K L N+MLLWHGSR TN+VGILS
Sbjct: 783 QYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILS 842
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 843 QGLRIAPPEAP 853
Score = 93.2 bits (230), Expect(2) = 5e-43
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = -3
Query: 527 FQVLTEVQNVL---GNXXXXXXXXXXXDASNRFFTLVPHVHPRIILDEDCLKSKIDMLEA 357
F+ LTE+QN+L + ASNRFFTL+P +HP II DED L K MLEA
Sbjct: 677 FEALTEIQNLLKDTADQALAVRESLIVAASNRFFTLIPSIHPHIIRDEDDLMIKAKMLEA 736
Query: 356 LRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
L+DIE+A+K++G D ++ LD Y KL C I P+ HDS+D+ L
Sbjct: 737 LQDIEIASKIVGF--DSDSDESLDDKYMKLHCDITPLAHDSEDYKL 780
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus
griseus GN=PARP1 PE=2 SV=3
Length = 1013
Score = 96.7 bits (239), Expect(2) = 4e-33
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + K L NR LLWHGSRTTN+ GILSQ
Sbjct: 815 KYVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 874
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 875 GLRIAPPEAP 884
Score = 64.7 bits (156), Expect(2) = 4e-33
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 709 YSILSEVQQAVSQGSSDSQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 765
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 766 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 809
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus
GN=PARP1 PE=2 SV=2
Length = 1016
Score = 96.7 bits (239), Expect(2) = 8e-33
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + K L NR LLWHGSRTTN+ GILSQ
Sbjct: 818 KYVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 877
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 878 GLRIAPPEAP 887
Score = 63.5 bits (153), Expect(2) = 8e-33
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ L SNRF+TL+PH P ++ + + +++K++ML+
Sbjct: 712 YSILSEVQQALSQGSSDSHILDL---SNRFYTLIPHDFGMKKPPLLNNANSVQAKVEMLD 768
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 769 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDKDSEE 812
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus
norvegicus GN=Parp1 PE=2 SV=4
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-32
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-32
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens
GN=PARP1 PE=1 SV=4
Length = 1014
Score = 94.7 bits (234), Expect(2) = 1e-32
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + K L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-32
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSDSQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus
GN=Parp1 PE=1 SV=3
Length = 1013
Score = 95.1 bits (235), Expect(2) = 2e-32
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 815 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 874
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 875 GLRIAPPEAP 884
Score = 63.9 bits (154), Expect(2) = 2e-32
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = -3
Query: 449 SNRFFTLVPH----VHPRIILDEDCLKSKIDMLEALRDIEVAAKLIGSTGGDDDEDPLDI 282
SNRF+TL+PH P ++ + D +++K++ML+ L DIEVA L+ D +DP+D+
Sbjct: 732 SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDV 791
Query: 281 NYPKLCCGIVPVPHDSDD 228
NY KL I V DS++
Sbjct: 792 NYEKLKTDIKVVDRDSEE 809
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus
GN=PARP1 PE=1 SV=2
Length = 1011
Score = 92.4 bits (228), Expect(2) = 1e-31
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
+Y++NTHA TH ++L++ ++F + REGE + K L NR LLWHGSRTTN+ GILSQ
Sbjct: 813 QYVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQ 872
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 873 GLRIAPPEAP 882
Score = 63.5 bits (153), Expect(2) = 1e-31
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L EVQ + + SNRF+TL+PH P ++ + + +++K+ ML+
Sbjct: 707 YSILNEVQQAVSDGGSESQILDL---SNRFYTLIPHDFGMKKPPLLSNLEYIQAKVQMLD 763
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D D+DP+DINY KL I V DS++
Sbjct: 764 NLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEE 807
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus
musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 95.9 bits (237), Expect(2) = 1e-30
Identities = 44/70 (62%), Positives = 58/70 (82%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
+YL++THAPTHK++ + L DVF V +EGE++AF ++ L NRMLLWHGSR +N+VGILS
Sbjct: 360 QYLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAF--REDLPNRMLLWHGSRLSNWVGILSH 417
Query: 31 GFRIAPPEAP 2
G R+APPEAP
Sbjct: 418 GLRVAPPEAP 427
Score = 57.4 bits (137), Expect(2) = 1e-30
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = -3
Query: 452 ASNRFFTLVPHVH----PRIILDEDCLKSKIDMLEALRDIEVAAKLIGSTGGDDDEDPLD 285
A N F+T +PH P +I E L K+ +LEAL DIE+A KL+ S E PLD
Sbjct: 277 ACNEFYTRIPHDFGLSIPPVIRTEKELSDKVKLLEALGDIEIALKLVKSE-RQGLEHPLD 335
Query: 284 INYPKLCCGIVPVPHDSDDFGLRLKVFGKY 195
+Y L C + P+ H+S++F KV +Y
Sbjct: 336 QHYRNLHCALRPLDHESNEF----KVISQY 361
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SSX0 |
| Definition |
tr|A9SSX0|A9SSX0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
71 |
| Score (bit) |
110.0 |
| E-value |
2.0e-49 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915741|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C09.
(529 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SSX0|A9SSX0_PHYPA Predicted protein OS=Physcomitrella paten... 110 2e-49
tr|A5AIW8|A5AIW8_VITVI Putative uncharacterized protein OS=Vitis... 105 2e-46
tr|A7QVS5|A7QVS5_VITVI Chromosome chr7 scaffold_192, whole genom... 105 2e-46
tr|B8B5F6|B8B5F6_ORYSI Putative uncharacterized protein OS=Oryza... 105 9e-46
tr|Q921K2|Q921K2_MOUSE Poly (ADP-ribose) polymerase family, memb... 95 1e-31
tr|Q3UJ03|Q3UJ03_MOUSE Putative uncharacterized protein OS=Mus m... 95 1e-31
tr|Q3TX36|Q3TX36_MOUSE Putative uncharacterized protein OS=Mus m... 95 1e-31
tr|Q3TIV3|Q3TIV3_MOUSE Putative uncharacterized protein OS=Mus m... 95 1e-31
tr|Q3TF18|Q3TF18_MOUSE Putative uncharacterized protein OS=Mus m... 95 1e-31
tr|Q3U868|Q3U868_MOUSE Putative uncharacterized protein (Fragmen... 95 1e-31
tr|B2R5W3|B2R5W3_HUMAN cDNA, FLJ92658, highly similar to Homo sa... 95 2e-31
tr|B1ANJ4|B1ANJ4_HUMAN Poly (ADP-ribose) polymerase 1 OS=Homo sa... 95 2e-31
tr|Q3TM68|Q3TM68_MOUSE Putative uncharacterized protein OS=Mus m... 93 6e-31
tr|B4E0E1|B4E0E1_HUMAN cDNA FLJ53442, highly similar to Poly (AD... 93 6e-31
tr|Q9PS82|Q9PS82_CHICK NAD+:PROTEIN(ADP-ribosyl)-transferase, AD... 92 2e-30
tr|B5X3M4|B5X3M4_SALSA Poly synthetase 2 OS=Salmo salar GN=PARP2... 99 4e-30
tr|Q5RHR0|Q5RHR0_DANRE Novel protein similar to vertebrate ADP-r... 96 1e-29
tr|Q499A8|Q499A8_DANRE Poly (ADP-ribose) polymerase family, memb... 96 1e-29
tr|Q4PQV7|Q4PQV7_TRYCR Poly(ADP-ribose) polymerase OS=Trypanosom... 96 2e-29
tr|Q4T502|Q4T502_TETNG Chromosome undetermined SCAF9478, whole g... 96 2e-29
tr|B6PZ38|B6PZ38_BRAFL Putative uncharacterized protein OS=Branc... 87 3e-29
tr|B3RJY6|B3RJY6_TRIAD Putative uncharacterized protein OS=Trich... 97 7e-29
tr|B6N2Q1|B6N2Q1_BRAFL Putative uncharacterized protein OS=Branc... 87 9e-29
tr|B6MZM6|B6MZM6_BRAFL Putative uncharacterized protein OS=Branc... 95 1e-28
tr|B4DV82|B4DV82_HUMAN cDNA FLJ58629, highly similar to Poly (AD... 92 3e-28
tr|Q2NLA7|Q2NLA7_XENLA PARP protein OS=Xenopus laevis GN=parp1 P... 92 3e-28
tr|Q9PS81|Q9PS81_9PIPI NAD+:PROTEIN(ADP-ribosyl)-transferase, AD... 92 3e-28
tr|Q4D1I2|Q4D1I2_TRYCR Poly(ADP-ribose) polymerase, putative OS=... 92 3e-28
tr|B4NZE0|B4NZE0_DROYA GE20224 OS=Drosophila yakuba GN=GE20224 P... 94 6e-28
tr|A8K214|A8K214_HUMAN cDNA FLJ75509, highly similar to Homo sap... 91 6e-28
>tr|A9SSX0|A9SSX0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_188096 PE=4 SV=1
Length = 989
Score = 110 bits (274), Expect(2) = 2e-49
Identities = 54/71 (76%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL+ THAPTH +W LELEDVF V REGE D+F K L N MLLWHGSRTTNYVGILS
Sbjct: 793 KYLKQTHAPTHTDWALELEDVFAVDREGEADSFAPFKMCLDNHMLLWHGSRTTNYVGILS 852
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 853 QGLRIAPPEAP 863
Score = 108 bits (271), Expect(2) = 2e-49
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXD-ASNRFFTLVPHVHPRIILDEDCLKSKIDMLEALR 351
++VLTE+QN+L ASNRFFTL+P VHP II DE LKSKI ML+ALR
Sbjct: 685 YEVLTEIQNILKEAVHGPREQGLLVDASNRFFTLIPTVHPMIISDEQTLKSKIHMLDALR 744
Query: 350 DIEVAAKLIGS--TGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
DIE+A++ +GS G ++EDPLD +Y KL C I P+PHDS DF L
Sbjct: 745 DIEIASEFLGSKVEEGTEEEDPLDTHYKKLHCDIRPIPHDSGDFKL 790
>tr|A5AIW8|A5AIW8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_037618 PE=4 SV=1
Length = 1016
Score = 105 bits (263), Expect(2) = 2e-46
Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL THAPTH +W LELE+VF++ REGE D F S ++ L NRMLLWHGSR TN+VGILS
Sbjct: 811 KYLLTTHAPTHMDWTLELEEVFSLEREGEFDKFASYREKLQNRMLLWHGSRLTNFVGILS 870
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 871 QGLRIAPPEAP 881
Score = 103 bits (256), Expect(2) = 2e-46
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXD--ASNRFFTLVPHVHPRIILDEDCLKSKIDMLEAL 354
F+ LTE+QN+L + ASNRFFT++P +HP +I DED KSK+ MLEAL
Sbjct: 706 FEALTEIQNLLNSNAHDPSFKESLIVDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEAL 765
Query: 353 RDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
+DIE+A++L+G D +D LD Y KLCC I P+PHDS+++ L
Sbjct: 766 QDIEIASRLVGF--DVDSDDSLDDKYKKLCCDIAPLPHDSEEYRL 808
>tr|A7QVS5|A7QVS5_VITVI Chromosome chr7 scaffold_192, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00007500001
PE=4 SV=1
Length = 947
Score = 105 bits (263), Expect(2) = 2e-46
Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL THAPTH +W LELE+VF++ REGE D F S ++ L NRMLLWHGSR TN+VGILS
Sbjct: 750 KYLLTTHAPTHMDWTLELEEVFSLEREGEFDKFASYREKLQNRMLLWHGSRLTNFVGILS 809
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 810 QGLRIAPPEAP 820
Score = 103 bits (256), Expect(2) = 2e-46
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXD--ASNRFFTLVPHVHPRIILDEDCLKSKIDMLEAL 354
F+ LTE+QN+L + ASNRFFT++P +HP +I DED KSK+ MLEAL
Sbjct: 645 FEALTEIQNLLNSNAHDPSFKESLIVDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEAL 704
Query: 353 RDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
+DIE+A++L+G D +D LD Y KLCC I P+PHDS+++ L
Sbjct: 705 QDIEIASRLVGF--DVDSDDSLDDKYKKLCCDIAPLPHDSEEYRL 747
>tr|B8B5F6|B8B5F6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_25738 PE=4 SV=1
Length = 977
Score = 105 bits (262), Expect(2) = 9e-46
Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVS-KKPLGNRMLLWHGSRTTNYVGILS 35
KYL NTHAPTHKEW+LELE+VF++ R+GE + + K L N+MLLWHGSR TNYVGILS
Sbjct: 780 KYLLNTHAPTHKEWSLELEEVFSLDRDGEFNKYSRYKNNLHNKMLLWHGSRLTNYVGILS 839
Query: 34 QGFRIAPPEAP 2
QG RIAPPEAP
Sbjct: 840 QGLRIAPPEAP 850
Score = 101 bits (252), Expect(2) = 9e-46
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXD---ASNRFFTLVPHVHPRIILDEDCLKSKIDMLEA 357
F+ LTE+QN+LGN ASNRFFTL+P +HP +I DED L K+ MLEA
Sbjct: 674 FEALTEIQNLLGNTNNQELAVRESLIVAASNRFFTLIPSIHPHVIQDEDDLMVKVKMLEA 733
Query: 356 LRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDDFGL 219
L+DIE+A+KL+G D+++ LD Y KL C I P+PHD +D+ L
Sbjct: 734 LQDIEIASKLVGF--DSDNDESLDDKYKKLRCAITPLPHDCEDYKL 777
>tr|Q921K2|Q921K2_MOUSE Poly (ADP-ribose) polymerase family, member 1
OS=Mus musculus GN=Parp1 PE=2 SV=1
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>tr|Q3UJ03|Q3UJ03_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Parp1 PE=2 SV=1
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>tr|Q3TX36|Q3TX36_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Parp1 PE=2 SV=1
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>tr|Q3TIV3|Q3TIV3_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Parp1 PE=2 SV=1
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>tr|Q3TF18|Q3TF18_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Parp1 PE=2 SV=1
Length = 1014
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGSSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
>tr|Q3U868|Q3U868_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Parp1 PE=2 SV=1
Length = 973
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -1
Query: 211 KYLENTHAPTHKEWNLELEDVFTVLREGEEDAFVSKKPLGNRMLLWHGSRTTNYVGILSQ 32
KY++NTHA TH ++LE+ D+F + REGE + + L NR LLWHGSRTTN+ GILSQ
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 31 GFRIAPPEAP 2
G RIAPPEAP
Sbjct: 876 GLRIAPPEAP 885
Score = 64.7 bits (156), Expect(2) = 1e-31
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = -3
Query: 527 FQVLTEVQNVLGNXXXXXXXXXXXDASNRFFTLVPH----VHPRIILDEDCLKSKIDMLE 360
+ +L+EVQ + SNRF+TL+PH P ++ + D +++K++ML+
Sbjct: 710 YSILSEVQQAVSQGGSESQILDL---SNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 766
Query: 359 ALRDIEVAAKLIGSTGGDDDEDPLDINYPKLCCGIVPVPHDSDD 228
L DIEVA L+ D +DP+D+NY KL I V DS++
Sbjct: 767 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEE 810
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