BP915744
Clone id YMU001_000076_C12
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAGGTGTCTATGGATAAGACACTTGTACTTGCCGTGGAGAGATCCGAAGGGATATTTTC
AGCTAGGCAGAGAGCCTTGACACATTTTTTCAGTGCTCAAACTGCACCTCCACGAACTGC
TACTTCCTCATTCATAGCCTTACCTCACAGCAGACCAATACTCCCTAAAGAGGTTACCTA
GGGCAGAGCCATTGCCATCTGCAAAGTGAGTAGTCTACCACAACTATGGCCATGCCTACG
GCTTCCTTATAATCCACGAATTAGGCCATACTTGCCAGCTATTCTGGTAGCATAGCACAA
GGATTCAGTGTTTTCTCTCCTTTGGAGAACCCTCTAAGGGACATACTGGACAGAGCCTGG
CATAGCCCAAATCTCACTGTCAATATGGAGCTCCTTTTGTAGCTAACTACTATCCATACC
CCTGAGTTTAAGGGATTGCACACACTTGTGACAGCCCATTGAAGGCAGCATCATCCTCAC
CATTCAAAG
■■Homology search results ■■ -
sp_hit_id Q6NRZ0
Definition sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis
Align length 77
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915744|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C12.
(489 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis GN=rc... 32 1.2
sp|A3QP08|TS1R2_SAISC Taste receptor type 1 member 2 OS=Saimiri ... 30 7.8

>sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis GN=rcor2
PE=2 SV=1
Length = 503

Score = 32.3 bits (72), Expect = 1.2
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2

Query: 92 SAQTAPPRTATSSFIALPHS--RPILPKEVT*GRAIAICKVSSLPQLWPCLRLPYNPRIR 265
S+Q APP A ++ ++LP RP +P T R + L Q P + PR
Sbjct: 427 SSQPAPPAAAAAASLSLPPPLLRPAIPCAPTLHRQPPPLQPGRLLQPRPPPLVRPAPRQS 486

Query: 266 PYLPAILVA*HKDSVFS 316
P P LV H +S FS
Sbjct: 487 PRAPPALVGSHAESTFS 503


>sp|A3QP08|TS1R2_SAISC Taste receptor type 1 member 2 OS=Saimiri
sciureus GN=TAS1R2 PE=3 SV=1
Length = 834

Score = 29.6 bits (65), Expect = 7.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1

Query: 298 QGFSVFSPLENPLRDILDRAWHSPNLTVNMEL 393
Q + + PL+ L+DI D +WH+ N T+ + +
Sbjct: 458 QSVASYQPLQGHLKDIQDISWHTVNNTIPVSM 489


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915744|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_C12.
(489 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******