BP915761
Clone id YMU001_000076_E06
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTTGAATCAAAGTACCCGAGTTGTTGAGAATAATGCCAGCAGGCATCTGTTAAAAGGGG
TATATTTTCTGCCAATTGCATATTTGCTTGCTTACATCCTATTTTAGAGCAATGCCAGCG
CCCCATGAATTTGCGGAGTACATAAAACAGGGATTGCATTTGGTGCAAGATGGCTTGTTC
CTTTTTCTGAGAAATACTTGAATGGGGCCGGGAATCGAGCCCCGGTCCACACCCACTTGA
AGACTTTGCCATGAGAAGGCGAGTATGTACAGAACTTAGAATACACATCCTCTTGAAGTG
GAACTTGGAAAGGCCCATACACCTTCCAGCTGGTTTAAGGTCTATGCAAGTATTGCCGTG
CTTAAGAGATGCTTCATTTTGCGCCAGCAATCCTTTATCTGGAAGTTTGTGAGGCCTTAA
AGTGGCCTAAAGTTGAGGTATAAACATGCTCACTTCTTGGCAAACCAAAATCAAAGATCA
ACAACTTTAGGCCTTAAAGTGGCCTAAAGTTGAGGTATAAACATGCTCACTTCTACAACT
TTCATTTTTTACTATCTTAGGTGTACCATCTATTAGACCAAACTCAAACTTCATTGTAAT
GGT
■■Homology search results ■■ -
sp_hit_id Q70UQ0
Definition sp|Q70UQ0|IKIP_HUMAN Inhibitor of nuclear factor kappa-B kinase-interacting protein OS=Homo sapiens
Align length 69
Score (bit) 31.2
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915761|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_E06.
(603 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q70UQ0|IKIP_HUMAN Inhibitor of nuclear factor kappa-B kinase-... 31 4.3
sp|Q5U3H9|SPIR2_DANRE Protein spire homolog 2 OS=Danio rerio GN=... 30 9.4

>sp|Q70UQ0|IKIP_HUMAN Inhibitor of nuclear factor kappa-B
kinase-interacting protein OS=Homo sapiens GN=IKIP PE=1
SV=1
Length = 350

Score = 31.2 bits (69), Expect = 4.3
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -1

Query: 351 TCIDLKPAGRCMGLSKFHFKRMCILSSVHTRLLMAKSSSGCGPGLDSRPHSSISQK--KE 178
TC+ L G C+GL+ F F++ + V + + K + L S+ S IS+K K
Sbjct: 45 TCLSLLSLGTCLGLAWFVFQQSEKFAKVENQYQLLKLETNEFQQLQSK-ISLISEKWQKS 103

Query: 177 QAILHQMQS 151
+AI+ Q++S
Sbjct: 104 EAIMEQLKS 112


>sp|Q5U3H9|SPIR2_DANRE Protein spire homolog 2 OS=Danio rerio
GN=spire2 PE=2 SV=1
Length = 606

Score = 30.0 bits (66), Expect = 9.4
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +2

Query: 212 ESSPGPHPLEDFAMRRRVCTELRIHILLKWNLERPIHLPAGLRSMQVLPCLRDASFC 382
E S P P ++ RV E+R L RP+ LP+ RS LPCL C
Sbjct: 344 ERSLPPPPQRPQSLHDRVLAEIRQDHKL-----RPVELPSSKRSFGSLPCLAHTCQC 395


tr_hit_id A3PF68
Definition tr|A3PF68|A3PF68_PROM0 Sensor protein OS=Prochlorococcus marinus (strain MIT 9301)
Align length 99
Score (bit) 34.3
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915761|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_E06.
(603 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3PF68|A3PF68_PROM0 Sensor protein OS=Prochlorococcus marinus... 34 5.8
tr|B4EP77|B4EP77_BURCJ Putative transposase OS=Burkholderia cepa... 29 7.5
tr|Q318G3|Q318G3_PROM9 Signal transduction histidine kinase OS=P... 34 7.6
tr|A6C6Z3|A6C6Z3_9PLAN Putative uncharacterized protein OS=Planc... 34 7.6

>tr|A3PF68|A3PF68_PROM0 Sensor protein OS=Prochlorococcus marinus
(strain MIT 9301) GN=P9301_17701 PE=4 SV=1
Length = 454

Score = 34.3 bits (77), Expect = 5.8
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -1

Query: 441 IPQL*ATLRPHKLPDKGLLAQNEASLKHGNTCI-DLKPAGRCMGLSKFHFKRMCILSSVH 265
+PQ+ + +L GL+ +N LK G+T I +L+PAG+ + L ++ L S
Sbjct: 338 LPQILSDSEKLELMLSGLIDKNTRGLKEGSTLILELRPAGQKLKLQ----LKVQKLESNQ 393

Query: 264 TRLLMAKSSSGCGPGLDSRPHSSISQKKEQAILHQMQSL 148
+L + S GP L+ P + Q + A + SL
Sbjct: 394 KEILKKDNGSDIGPVLNWNPQTGSLQLSQNATQKLLASL 432


>tr|B4EP77|B4EP77_BURCJ Putative transposase OS=Burkholderia cepacia
(strain J2315 / LMG 16656) GN=BceJ2315_69420 PE=4 SV=1
Length = 341

Score = 29.3 bits (64), Expect(2) = 7.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2

Query: 230 HPLEDFAMRRRVCTELRIHILLKWNLERPIHLPAGLRSMQVLPCLRDA 373
H + + +R+R CT +IH L LE I LP G+ ++ LP + +A
Sbjct: 123 HRVREGLVRQRTCTINQIHAFL---LEFGISLPRGMAVIRRLPAVLEA 167



Score = 22.7 bits (47), Expect(2) = 7.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1

Query: 118 APHEFAEYIKQGLHLVQDGL 177
+PH A+ I LH V++GL
Sbjct: 110 SPHNEAQQIVSALHRVREGL 129


>tr|Q318G3|Q318G3_PROM9 Signal transduction histidine kinase
OS=Prochlorococcus marinus (strain MIT 9312)
GN=PMT9312_1671 PE=4 SV=1
Length = 454

Score = 33.9 bits (76), Expect = 7.6
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -1

Query: 441 IPQL*ATLRPHKLPDKGLLAQNEASLKHGNTCI-DLKPAGRCMGLSKFHFKRMCILSSVH 265
+PQ+ + +L +GL+ +N LK G+T + +L+PAG+ + L K C
Sbjct: 338 LPQILSDSEKLELMLRGLIDKNTRGLKEGSTLVLELRPAGQKLKLQLKVQKSDC----NR 393

Query: 264 TRLLMAKSSSGCGPGLDSRPHSSISQKKEQAILHQMQSL 148
+L ++ S GP L+ P + Q + A + SL
Sbjct: 394 KEILKKENGSDIGPVLNWNPQTGSLQLSQNATQKLLASL 432


>tr|A6C6Z3|A6C6Z3_9PLAN Putative uncharacterized protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_03895 PE=4
SV=1
Length = 431

Score = 33.9 bits (76), Expect = 7.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -1

Query: 363 KHGNTCIDLKPA-GRCMGLSKFHFKRMCILSSVHTRLLMAKSSSGCGPGLDSRPHSSISQ 187
+HG L A G +GL + H ++CI VH ++ ++SG L SRP S+
Sbjct: 202 RHGLQMSSLAMAMGTQLGLQREHLSQLCIGCLVHDTGMVKINTSGIVGHLPSRPIDSLEL 261

Query: 186 KKEQAILHQMQS 151
+K I + + S
Sbjct: 262 RKHPVITYNLLS 273