BP915764 |
Clone id |
YMU001_000076_E09 |
Library |
YMU01 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000076_E09. |
Accession |
BP915764 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4051Contig1 |
Sequence |
GGCAGGTGCAATAGTGACATGGGTGTGCGATCCTATGCATGGGAACACTATTAAGGTGCC CACGGGCTACAAGACAAGGCCATTTGATGCTATATTAGCGGAGGTAATGGCTTTCTTTGA CGTGCATGAAGATGAGGGGACTCATGCCGGTGGGGTGCACTTGGAGATGACGGGCCGGAA TGTGACAGAATGCATTGGAGGCACTCGCGAAGTTACAGTGGATGATTTAGCCTCACGTTA CCATACACATTGCGACCCACGACTGAATGCCTCTCAATCTCTAGAGCTTGCATTTGTTGT TGCGGAGCGCCTCCGACACAATCGGCAGGAAAAGCCTCTTCGAAGCCACCTGGTGATATA GTAGGACTGGGAATAGTTGACAGTGCGGGTGATAGTCTTTTGGGTGGAGTCTTTTCTTTA CTCTTGCTAGTTTGGAAGGCATATCAATGAGTGCTGCCTACTTTGCTGTACTTGAAAGAT TACTTGCCTGTATTGTAAATCCCAGCTACTTTCACAATTGGTTTTAAATAAAAACGAGTG CACATTTTTACCGAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37822 |
Definition |
sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum |
Align length |
108 |
Score (bit) |
190.0 |
E-value |
4.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915764|Adiantum capillus-veneris mRNA, clone: YMU001_000076_E09. (559 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase... 190 4e-48 sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase... 190 5e-48 sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase... 189 6e-48 sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase... 188 1e-47 sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase... 186 7e-47 sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase... 186 7e-47 sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase... 181 2e-45 sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase... 180 4e-45 sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase... 175 1e-43 sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate... 155 1e-37 sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase... 141 2e-33 sp|P55911|AROF_STRLI Phospho-2-dehydro-3-deoxyheptonate aldolase... 134 2e-31 sp|P80576|AROF_NEUCR Phospho-2-dehydro-3-deoxyheptonate aldolase... 119 8e-27 sp|Q51517|PHZC_PSECL Probable phospho-2-dehydro-3-deoxyheptonate... 78 3e-14 sp|Q51789|PHZC_PSEFL Probable phospho-2-dehydro-3-deoxyheptonate... 74 4e-13 sp|Q6DGV1|CELF4_DANRE CUG-BP- and ETR-3-like factor 4 OS=Danio r... 32 1.6 sp|A5N2R5|CINA_CLOK5 Putative competence-damage inducible protei... 32 2.1 sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom... 31 4.7 sp|Q12SB8|SECA_SHEDO Protein translocase subunit secA OS=Shewane... 31 4.7 sp|Q9U2C9|TBX37_CAEEL Putative T-box protein 37 OS=Caenorhabditi... 30 6.1 sp|Q99332|HPH1_YEAST Protein HPH1 OS=Saccharomyces cerevisiae GN... 30 6.2 sp|P13458|SBCC_ECOLI Nuclease sbcCD subunit C OS=Escherichia col... 30 8.1 sp|O66682|LY41_AQUAE Uncharacterized AIPM/Hcit synthase family t... 30 8.1
>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1 Length = 511
Score = 190 bits (483), Expect = 4e-48 Identities = 88/108 (81%), Positives = 95/108 (87%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWVCDPMHGNTIK P G KTR FD+ILAEV AFFDVHE EG+H GG+HLEMTG+N Sbjct: 398 AGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQN 457
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL SRYHTHCDPRLNASQSLEL+F+VAERLR R Sbjct: 458 VTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRR 505
>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2 Length = 525
Score = 190 bits (482), Expect = 5e-48 Identities = 88/108 (81%), Positives = 96/108 (88%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 +G IVTWVCDPMHGNTIK P G KTR FD+ILAEV AF DVHE EG+HAGG+HLEMTG+N Sbjct: 411 SGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQN 470
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL+SRYHTHCDPRLNASQSLELAF+VAERLR R Sbjct: 471 VTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRR 518
>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1 Length = 539
Score = 189 bits (481), Expect = 6e-48 Identities = 86/117 (73%), Positives = 99/117 (84%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 +G IVTW+ DPMHGNTIK P G KTRPFD+ILAEV AFFDVH+ EG+H GG+HLEMTG+N Sbjct: 416 SGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQN 475
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNRQEKPLRSHL 352 VTECIGG+R VT DDL+ RYHTHCDPRLNASQSLELAF++AERLR R + S+L Sbjct: 476 VTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRMRSGVNSNL 532
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1 Length = 542
Score = 188 bits (478), Expect = 1e-47 Identities = 88/108 (81%), Positives = 95/108 (87%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWV DPMHGNTIK P G KTRPFD+I AEV AFFDVHE EG+H GGVHLEMTG+N Sbjct: 426 AGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQN 485
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL+SRYHTHCDPRLNASQSLELAF++AERLR R Sbjct: 486 VTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR 533
>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 Length = 541
Score = 186 bits (472), Expect = 7e-47 Identities = 86/108 (79%), Positives = 95/108 (87%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWV DPMHGNTIK P G KTRPFD+I AEV AFFDVH+ EG+H GGVHLEMTG+N Sbjct: 425 AGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQN 484
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL+SRYHTHCDPRLNASQSLEL+F++AERLR R Sbjct: 485 VTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRR 532
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2 Length = 538
Score = 186 bits (472), Expect = 7e-47 Identities = 86/108 (79%), Positives = 95/108 (87%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWV DPMHGNTIK P G KTRPFD+I AEV AFFDVH+ EG+H GGVHLEMTG+N Sbjct: 425 AGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQN 484
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL+SRYHTHCDPRLNASQSLEL+F++AERLR R Sbjct: 485 VTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRR 532
>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 Length = 511
Score = 181 bits (460), Expect = 2e-45 Identities = 85/108 (78%), Positives = 92/108 (85%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWVCDPMHGNTIK P G KTR FD+I AEV AFFDVHE EG+H +HLEMTG+N Sbjct: 398 AGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQN 457
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL SRYHTHCDPRLNASQSLEL+F+VAERLR R Sbjct: 458 VTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRR 505
>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2 Length = 554
Score = 180 bits (457), Expect = 4e-45 Identities = 84/108 (77%), Positives = 93/108 (86%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTW+ DPMHGNTIK P G KTRPFD+I AEV AFFDVH+ EG+H GGVHLEMTG+N Sbjct: 431 AGQIVTWITDPMHGNTIKAPCGLKTRPFDSI-AEVRAFFDVHDQEGSHPGGVHLEMTGQN 489
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTECIGG+R VT DDL RYHTHCDPRLNASQSLEL+F++AERLR R Sbjct: 490 VTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKR 537
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2 Length = 507
Score = 175 bits (444), Expect = 1e-43 Identities = 81/108 (75%), Positives = 92/108 (85%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWV DPMHGNTI P G KTR FDAI AE+ AFFDVH+ EG+ GGVHLEMTG+N Sbjct: 388 AGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQN 447
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNR 325 VTEC+GG+R +T +DL+SRYHTHCDPRLNASQSLELAF++AERLR R Sbjct: 448 VTECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR 495
>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2 Length = 493
Score = 155 bits (393), Expect = 1e-37 Identities = 77/116 (66%), Positives = 87/116 (75%) Frame = +2
Query: 2 AGAIVTWVCDPMHGNTIKVPTGYKTRPFDAILAEVMAFFDVHEDEGTHAGGVHLEMTGRN 181 AG IVTWVCDPMHGNTIK P G KTR FDAILAEV AF+DVHE EGT G Sbjct: 389 AGQIVTWVCDPMHGNTIKAPCGLKTRAFDAILAEVRAFYDVHEQEGTLPG---------- 438
Query: 182 VTECIGGTREVTVDDLASRYHTHCDPRLNASQSLELAFVVAERLRHNRQEKPLRSH 349 TEC+GG+R +T DD +RYHTHCDPRLNASQSLELAF++AERLR ++E L +H Sbjct: 439 -TECVGGSRTITYDDRQTRYHTHCDPRLNASQSLELAFIIAERLR--KEESVLNAH 491
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R2Z0 |
Definition |
tr|A7R2Z0|A7R2Z0_VITVI Chromosome undetermined scaffold_465, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
108 |
Score (bit) |
196.0 |
E-value |
9.0e-49 |
Report |
|