BP915766
Clone id YMU001_000076_E11
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCAGAAGCCAAACAATTGAAAGGCATATATATGAAAGCCTTTCAAAAAATCTTCAGCATG
GTGGAGGACTCTGGGTGGCGCTTAAAAGGAAATGATGATGAATCTGAAGTTCGAATGATT
GATGATGACCTCATACCTCCCACGTTGATGTCTGAGTACAGATGACATGGTTGCTGCAGC
TTACAAACAGACAAAACCAGAATTTGGTGCATAATATATGCTTTTGAAGAAGGCAGAGCT
TGATCCTTGAAGCGAGCATATGAGTCTTTGCAGGCTGAGCGTGATAGAAAGTCTCGGACA
CATGCGCGGCCTGGAGATCGCGTATAATCAGCCTCCTACACTAGATAATTAATTTCAGCT
CTCAGAGAGGCATGACAACTATGATCATTTCAAATTAGGAAAACCAAGATGAGAAGAGGT
TCCTATATTGTGATCATCGAAAAATGTTAGAAAGAGCTTGTGTCATTCTCTTGCTATTAG
CATTGCCATGCTAAGGTGCCACTTACTC
■■Homology search results ■■ -
sp_hit_id Q3SWQ2
Definition sp|Q3SWQ2|Y021_NITWN UPF0090 protein Nwi_0021 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Align length 44
Score (bit) 29.6
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915766|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_E11.
(508 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3SWQ2|Y021_NITWN UPF0090 protein Nwi_0021 OS=Nitrobacter win... 30 8.6
sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4 OS=Sch... 30 8.6

>sp|Q3SWQ2|Y021_NITWN UPF0090 protein Nwi_0021 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_0021
PE=3 SV=1
Length = 260

Score = 29.6 bits (65), Expect = 8.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1

Query: 34 KAFQKIFSMVEDSGWRL-----KGNDDESEVRMIDDDLIPPTLM 150
K F+ + VED+ RL + NDDESEV ++ +D+ L+
Sbjct: 133 KRFRGVLQGVEDNAVRLHRDDIRNNDDESEVMLVMEDIADARLV 176


>sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4
OS=Schizosaccharomyces pombe GN=cut20 PE=1 SV=2
Length = 719

Score = 29.6 bits (65), Expect = 8.6
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 229 LQKHILCTKFWFCLFVSCSNHVICTQTST---WEV*GH 125
L++ ILC ++CSNH+IC ++++ W+V H
Sbjct: 30 LKRVILCPSMELIAILTCSNHLICCRSNSQRIWDVDFH 67


tr_hit_id A9TZ91
Definition tr|A9TZ91|A9TZ91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 43
Score (bit) 40.4
E-value 0.05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915766|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_E11.
(508 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TZ91|A9TZ91_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.050

>tr|A9TZ91|A9TZ91_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_172816 PE=4 SV=1
Length = 208

Score = 40.4 bits (93), Expect = 0.050
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +1

Query: 1 PEAKQLKGIYMKAFQKIFSMVEDSGWRLKGNDDESEVRMIDDD 129
P+ ++L+G Y KAF ++S++EDSGW LK +E+ ++DD
Sbjct: 157 PQCEELEGPYKKAFYSMWSVLEDSGWLLK--QPGAEIPEVEDD 197