BP915770
Clone id YMU001_000076_F04
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000076_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGATCTTTCTGCCTTGTGTACAACACCAGTGTCCCATGTGGGAAGCATGGCTCTAGAA
TAGGTGTACTACAGGCAGAAAATTCATCTCGGACACAATCTGCATAGCATGATGGTGTGG
ATAGTTGAAAACTTACGCCATGAAATGTCCTGTCCTTGTCCAATTGAGACATAGTTGTAG
GTCATTGCCATAGCCCCTTGCTGTGTTTTTGTAGGTTTGCATGACGTAATTATGTCCACC
TATCCATGATAGGATAGGTACAAGAGTTTTTGTCTTCTTCTAGTACAACTTGAGGAGATC
TATAGGAGGATCACAAACCTGTGCACAAAGCAGTACAAAGCATGATATGCGGAGACAGTC
CCCATCTTAGGGAAGATCACAGACCTCGCTTATCATGAATCATCCACGCCAAGAACGTCT
GGTGCTCTGTTGTTGTGCACTCGCCTTTGCTTGAGGC
■■Homology search results ■■ -
sp_hit_id Q6DFG0
Definition sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis
Align length 44
Score (bit) 33.5
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915770|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F04.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xeno... 33 0.44
sp|A3KN24|RWDD3_BOVIN RWD domain-containing protein 3 OS=Bos tau... 31 2.3
sp|Q9SYK4|IP5PD_ARATH Type I inositol-1,4,5-trisphosphate 5-phos... 30 4.9
sp|P28238|MIP_CHICK Lens fiber major intrinsic protein OS=Gallus... 30 5.0
sp|O04093|RP8L1_ARATH Putative disease resistance protein RPP8-l... 30 6.6

>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus
laevis GN=arhgap21-A PE=2 SV=1
Length = 1926

Score = 33.5 bits (75), Expect = 0.44
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3

Query: 254 SYHG*VDIITSCKPTKTQQGAMAMTYNYVSIGQGQDISWRKFST 123
SY G + + S +PT +G+ + T +Y S G Q I WR + T
Sbjct: 340 SYGGHAENMFSTRPTAQAEGSPSPTNHYSSPGPHQQIDWRNYKT 383


>sp|A3KN24|RWDD3_BOVIN RWD domain-containing protein 3 OS=Bos taurus
GN=RWDD3 PE=2 SV=1
Length = 267

Score = 31.2 bits (69), Expect = 2.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1

Query: 100 LHSMMVWIVENLRHEMSCP 156
+H +++WI ENLRH + CP
Sbjct: 100 VHELVLWIQENLRHILKCP 118


>sp|Q9SYK4|IP5PD_ARATH Type I inositol-1,4,5-trisphosphate
5-phosphatase 13 OS=Arabidopsis thaliana GN=5PTASE13
PE=1 SV=1
Length = 1136

Score = 30.0 bits (66), Expect = 4.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3

Query: 177 VGHCHSPLLCFCRFA*RNYV 236
V H H P+LCFC F R YV
Sbjct: 474 VNHHHRPVLCFCTFGDRIYV 493


>sp|P28238|MIP_CHICK Lens fiber major intrinsic protein OS=Gallus
gallus GN=MIP PE=1 SV=2
Length = 262

Score = 30.0 bits (66), Expect = 5.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1

Query: 415 FLAWMIHDKRGL*SSLRWGLSPHIMLCTALCTGL 314
FL +++ GL +SLRW PH +L +AL GL
Sbjct: 17 FLGSLLYTLLGLGASLRWAPGPHGVLGSALAFGL 50


>sp|O04093|RP8L1_ARATH Putative disease resistance protein RPP8-like
protein 1 OS=Arabidopsis thaliana GN=RPP8L1 PE=2 SV=1
Length = 821

Score = 29.6 bits (65), Expect = 6.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2

Query: 132 VFNYPHHHAMQIVSEMNFLPVVHLF*SHASHMGHWCCT 19
V N H +++ M P +LF H SH+ WCC+
Sbjct: 718 VLNCIHLKELELAIHMPRFPDQYLFHPHLSHIYLWCCS 755


tr_hit_id B7ZSB8
Definition tr|B7ZSB8|B7ZSB8_XENLA Arhgap21 protein OS=Xenopus laevis
Align length 44
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915770|Adiantum capillus-veneris mRNA, clone:
YMU001_000076_F04.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZSB8|B7ZSB8_XENLA Arhgap21 protein OS=Xenopus laevis GN=arh... 33 5.4
tr|A4RSQ3|A4RSQ3_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 7.1

>tr|B7ZSB8|B7ZSB8_XENLA Arhgap21 protein OS=Xenopus laevis
GN=arhgap21 PE=2 SV=1
Length = 1927

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3

Query: 254 SYHG*VDIITSCKPTKTQQGAMAMTYNYVSIGQGQDISWRKFST 123
SY G + + S +PT +G+ + T +Y S G Q I WR + T
Sbjct: 341 SYGGHAENMFSTRPTAQAEGSPSPTNHYSSPGPHQQIDWRNYKT 384


>tr|A4RSQ3|A4RSQ3_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_48809 PE=3 SV=1
Length = 717

Score = 33.1 bits (74), Expect = 7.1
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +1

Query: 199 CCVFVGLHDVIMSTYP**DRYKSFCLLLVQLEEIYRRITNLCTKQYKA*YAETVPILGKI 378
CCV + L DV K FC L + EE+ RIT+ C K+Y +AE + G I
Sbjct: 42 CCVDIDLQDV-----------KEFCGALEEREELLDRITSNC-KRYATLFAEEID--GLI 87

Query: 379 TDLAYHESS 405
+LA +S
Sbjct: 88 KNLASSSAS 96